CV885189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22 Identity = 60/155 (38.71%), Postives = 93/155 (60.00%), Query Frame = 2 Query: 311 RMKQRGKRSKKVI-GKPKSKLLFIIRIQGT--SDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATV------DRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNK 748 R+ Q G +SK++ GKP L I+R G + + K +K+L LRL +I SGVFV+ + + +L+ + PY P+L V++L+ K+ TV + +++ L DNN++E+ LG GIICIEDI+HE +++ FK V +FL P LNK Sbjct: 14 RVAQDGSKSKEIYSGKPT--LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPFELNK 166
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22 Identity = 72/224 (32.14%), Postives = 116/224 (51.79%), Query Frame = 2 Query: 137 ETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMK---------QRGKRSKKVIGKPKSKLLFIIRIQGTSD---MHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATV-----DRQRIPLTDNN-IIEQTLG-KYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751 E +L+KRK+ + L ++ Q + +KN + + + R E + Y+ EL+ R+K Q K S+ +KLLFIIRI + + K +K+L+ LRL R +GVFV+ + +L+ + PY+ G P+L ++++L K+ +V RI DNN ++E G G ICIED++HE+A + HFK V N++ P LN P Sbjct: 9 EILLRKRKNNDRKRLEKQEQARQRQLEQKKKNDQRSKKFV-RAETLVSNYKSNELENKRIKHITKFEKQSQADKISQAKEDDESAKLLFIIRIPDHTKGLKVPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPFKLNAP 231
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20 Identity = 80/271 (29.52%), Postives = 128/271 (47.23%), Query Frame = 2 Query: 116 QPLAFVAETVLKKRKSTEA-------LALTRKAQLELGKYGHGQKNKKSKVEDI-------KRPEQFIKQYRDQELD---------------LIRMKQRGKRSK-----------------------KVIGKPKSKLLFIIRIQGTSDMH--PKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDR------QRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNK 748 QPL E +L+KR++ + LA RK Q E K +KN+ + E I +R + I++ RD E ++R+ +R SK K++ + LLF+IR++G + + K K+L LRL + +GVF++ + +L+ V PY+ G P+LA+++ LI K+ R + I L DNNI+E+ LG G+ICIEDI+HEI+ + +F + FL P LN+ Sbjct: 3 QPLNSNPEVLLRKRRNADRTRLEKQELAKKRKEQEE--KQKRSKKNRFVRAETIVATTLATEREKTRIRRVRDLENQKVKNDLSHIPSDRDFILRISEREAGSKATSESELQDVDEEDEEDDGLIREKIVYDGEPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPFKLNR 271
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19 Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 2 Query: 350 GKPKSKLLFIIRIQGTSDMHPKTK--KILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYK------KGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNK 748 GKP LLFI+R++G ++ K KIL LRL +GVFV+ + +L+ + PYV G P+L++++ LI K KG + I L DNNI+E+ LG +GIIC+EDI+HEIA + F FL P LN+ Sbjct: 137 GKPA--LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPFKLNR 275
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19 Identity = 80/278 (28.78%), Postives = 129/278 (46.40%), Query Frame = 2 Query: 89 SDMAEEAAQQPLAFVAETVLKKRKSTEALALTRKAQLELGKYGHGQKNKKSKVEDIKRPEQFIKQYR--DQELDLIRMKQRGKRSKK----------------------VIGKPKSK--------------------------LLFIIRIQG--TSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQ------RIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNK 748 SD+ E ++PL E +L+KR++ + TR + EL + Q+ ++ K E IK ++FI+ L R K+R KR K V KP+S+ LLF++R++G + + K +IL LRL + + VF++ + +L+ + PYV G P+L +++ LI K+ R+ I L DNNI+E+ LG G+ICI+DI+HEIA + +F + FL P LN+ Sbjct: 2 SDITNE--KKPLNSDPEILLRKRRNADR---TRLEKQELAR----QRQEQRKKEQIKNKKKFIRAESLVANSLATSREKERIKRISKLEHKKLKGDVSHLPSEKNFFLKVTEKPQSEETDDLIDEDEEDGFEREKVAYNGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPFKLNR 270
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17 Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 326 GKRSKKVIGKPKSKLLFIIRIQG--TSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQ------RIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNK 748 G +K ++ LLF++R++G + + K ++L LRL + +GVFVR + +LQ V PYV G P+LA+++ L+ K+ R + L DN ++E+ LG G+IC+EDI+HEIA + F + FL P L + Sbjct: 98 GLEREKTAYDGRATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPFKLGR 246
BLAST of CV885189 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.088e-14 Identity = 54/163 (33.13%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 266 EQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLF-IIRIQGTSDMHPKTKKILYNLRLRRIFSGVFVRANDGMLEVLQKVEPYVTYGYPNLANVKELIYKKGYATVDRQRIPLTDNNIIEQTLGKYGIICIEDIVHEIANVCPHFKEVINFLGPLTLNKP 751 E+ + +Y +QE +++ K K V PK F +I I+ + PK +K+L RL+RI + V VR N ++LQ ++ +V +G + +++L+Y KG R+ LT+ I + GK I CIE++VH I N FK+V +FL P L+ P Sbjct: 49 EKLLNKYYEQEREILEKKSSMKNGFYV---PKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPP 206 The following BLAST results are available for this feature:
BLAST of CV885189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885189 ID=CV885189; Name=CV885189; organism=Citrus sinensis; type=EST; length=752bpback to top |