CV885176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.643e-55 Identity = 114/218 (52.29%), Postives = 145/218 (66.51%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 DP V E I E ERQ +LELIASENF S AVMEA GS LTNKY+EG PGKRYYGG ++D +E L +RA F D NVQP SGS AN VY ++LKP D I+G++L HGGHL+HG V+ + +F +PY + + T +D++ +E+ A+ +PKLI+ GASAYPR D+ R IAD VGAL+M+DMAHI+GLVAA + P Y Sbjct: 8 DPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGADH----ANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKLIVVGASAYPRVLDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPVPY 216
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_CLOD6 (Serine hydroxymethyltransferase OS=Clostridium difficile (strain 630) GN=glyA PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.643e-55 Identity = 114/220 (51.82%), Postives = 153/220 (69.55%), Query Frame = 3 Query: 246 SLGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 905 +L +ADPE+ E + +E +RQ +++ELIASEN S VME +GS LTNKY+EG GKRYYGG EYIDE+ETL R F + NVQP SG+ AN VY A+LKP D +MG++L GGHL+HG +SG Y++ Y +D+ +GL+D+D + K A +PK+I+AGASAYPR+ D+ + R+IAD VGALLM+DMAHI+GLVAA + +P Sbjct: 4 NLKKADPEIYESMKRELKRQQRNIELIASENIVSVPVMETMGSHLTNKYAEGYSGKRYYGGCEYIDEVETLAIDRIKKIFGAEH----ANVQPHSGANANIGVYFAMLKPGDVVMGMNLSQGGHLTHGAPV---NISGQ--YYKFYEYGIDKDSGLIDFDEVRKIAHEVKPKMIVAGASAYPREIDFKKFREIADEVGALLMVDMAHIAGLVAAGLHQNP 214
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB8 (Serine hydroxymethyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glyA PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.643e-55 Identity = 114/218 (52.29%), Postives = 146/218 (66.97%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 D E+ ++I KE RQ K +ELIASEN S AVMEA+GS LTNKY+EG P KRYYGG +DE+E + RA F + NVQP SGS AN VY A+L+P D ++G+DL HGGHL+HG V+ + F + Y +D+ T ++DY+ + K AI +PKLI+AGASAY R D+P+ R+IAD VGALLM+DMAHI+GLVAA V P Y Sbjct: 10 DKEIYDLIEKELVRQQKGIELIASENIVSPAVMEAMGSYLTNKYAEGYPNKRYYGGCHVVDEIEQIAIDRAKELFGAEH----ANVQPHSGSQANMAVYFAVLEPGDTVLGMDLSHGGHLTHG-----SPVNFSGKLFNFVSYGVDKETEMIDYENVRKLAIENKPKLIVAGASAYARILDFPKFREIADEVGALLMVDMAHIAGLVAAGVHPSPVPY 218
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_PROA2 (Serine hydroxymethyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glyA PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.474e-54 Identity = 115/222 (51.80%), Postives = 148/222 (66.67%), Query Frame = 3 Query: 249 LGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 L + D E+ + I+ E RQ ++LELIASENF S+AVMEA GS +TNKY+EG PGKRYYGG E++D E L ++RA F VNVQP SGS AN V ++LKP D IMGLDL HGGHL+HG V+ + F++ Y +D TGL+D D +E A+ RP+LII GASAY + FD+ RQIAD VGA LM D+AH +GL+AA ++ DP + Sbjct: 6 LQKQDKEIFDAISNEVLRQTETLELIASENFASKAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAEDLARERAKKLFGCQY----VNVQPHSGSSANMGVLFSVLKPGDTIMGLDLSHGGHLTHG-----SSVNFSGQLFDAHSYGVDRETGLIDMDRVEDMALSVRPRLIICGASAYSQGFDFKAFRQIADKVGAFLMADIAHPAGLIAAGLLNDPMPH 218
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.474e-54 Identity = 116/219 (52.97%), Postives = 146/219 (66.67%), Query Frame = 3 Query: 249 LGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 905 L DP + ++I +E +RQ + LELIASEN+TS AVMEA GS LTNKY+EGLPG+RYYGG E++D +E L +RA F NVQP SG+ AN V+TA+L+P D I+G+ L HGGHL+HG V+ + ++ Y +D TG +DYD L A RPKLI +GASAYPR D+ RMRQIAD VGALLM D+AHI+GLVAA P Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTSH----ANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKLITSGASAYPRIIDFARMRQIADEVGALLMADIAHIAGLVAAGEHPSP 214
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_PETMO (Serine hydroxymethyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glyA PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.926e-54 Identity = 114/222 (51.35%), Postives = 148/222 (66.67%), Query Frame = 3 Query: 249 LGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 L +D EV EI+ KE +RQ LELIASEN+ S++VMEA GS TNKY+EG P +RYYGG EYIDE+ETL + RA FN NVQP SGS AN Y A++KP D +MG+ L HGGHL+HG V+ + + F + Y +DE T ++YD +E+ A +PK+I+AG SAY R D+ R R+IAD VGA LM+DMAH +GLVAA + +P +Y Sbjct: 5 LKSSDNEVYEILQKELKRQEYGLELIASENYASKSVMEAAGSIFTNKYAEGYPKRRYYGGCEYIDEVETLARDRAKELFNAK----FANVQPHSGSQANMGAYLALMKPGDTLMGMSLSHGGHLTHG-----APVNFSGMLFNVVSYGVDEETETINYDEVERIAKDAKPKVIVAGGSAYSRIIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPVEY 217
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA3_PSEPF (Serine hydroxymethyltransferase 3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA3 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.515e-54 Identity = 109/218 (50.00%), Postives = 148/218 (67.89%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 D + + E++RQ +ELIASEN+TS+ VM+A GS LTNKY+EG PGKRYYGG E++D++E L +RA F D NVQP SGS AN VY A+L+ D I+G+ L HGGHL+HG +VS + + ++ Y +D TGL+DYD +E+ A+ +PK+I+AG SAY + D+PR RQIAD VGALL +DMAH++GLVAA + +P Y Sbjct: 12 DDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYPGKRYYGGCEHVDKVEALAIERAKQLFGADY----ANVQPHSGSSANSAVYLALLQAGDTILGMSLAHGGHLTHG-----AKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVECKPKMIVAGFSAYSKTLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPY 220
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.285e-54 Identity = 115/218 (52.75%), Postives = 144/218 (66.06%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 DPEV E I KE+ RQ LELIASENF SRAVM A GS +TNKY+EGLPG RYYGG EY+D +E L + R F + NVQP SG+ AN VY A L+P IMG++L HGGHL+HG K +SG YF + Y ++ T +DY+ L + A+ RP++I+AGASAYPR D+ + R+IAD GALL +DMAHI+GLVAA + P Y Sbjct: 12 DPEVAEAIEKEEARQNNKLELIASENFVSRAVMAAQGSVMTNKYAEGLPGARYYGGCEYVDIVEELARDRVKEIFGAEH----ANVQPHSGAQANTAVYFAALQPGQTIMGMNLNHGGHLTHG---SKVNISGK--YFNIVDYGVNRDTERIDYEELREIALKARPQMIVAGASAYPRILDFKKFREIADEAGALLFVDMAHIAGLVAAGLHPSPVPY 220
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_SYNSC (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9605) GN=glyA PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.285e-54 Identity = 115/223 (51.57%), Postives = 148/223 (66.37%), Query Frame = 3 Query: 237 VDYSLGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 905 +D L ++DP++ I +E++RQ LELIASENF SRAVM+A GS LTNKY+EGLP KRYYGG E++D +E L +RA F W NVQP SG+ ANF V+ A+L+P D IMGLDL HGGHL+HG VSG +F + Y +D+ T +D + + + A+ +PKLI+ G SAYPR D+ R IAD VGA L+ DMAHI+GLVAA V P Sbjct: 9 IDADLAQSDPDIAAFINQERQRQETHLELIASENFASRAVMQAQGSVLTNKYAEGLPSKRYYGGCEHVDAIEELAIERAKQLFGA---AW-ANVQPHSGAQANFAVFLALLQPGDTIMGLDLSHGGHLTHGSPV---NVSGK--WFNVVQYGVDKETQRLDMEAIRQLALEHKPKLIVCGYSAYPRTIDFAAFRAIADEVGAYLLADMAHIAGLVAAGVHPSP 222
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBK (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=glyA PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.285e-54 Identity = 109/223 (48.88%), Postives = 152/223 (68.16%), Query Frame = 3 Query: 246 SLGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 +L DPE+ ++I KE+ERQ ++ELIASENFTS +VMEA+GS LTNKY+EG P KRYYGG E++DE+E L ++R F + NVQP SGS AN VY ++L+ D I+G+DL HGGHL+HG V+ + + + Y +D+ T +DYD L+K A+ RPK+I++GASAYPR D+ ++R+I D + A +M+DMAHI+GLVA + P Y Sbjct: 5 NLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFVAEH----ANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPRIIDFEKIREICDEIDAYMMVDMAHIAGLVATGIHPSPVPY 218 The following BLAST results are available for this feature:
BLAST of CV885176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885176 ID=CV885176; Name=CV885176; organism=Citrus sinensis; type=EST; length=915bpback to top |