CV885175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.063e-51 Identity = 103/203 (50.74%), Postives = 134/203 (66.01%), Query Frame = -3 Query: 284 KYCDVVTTTTHKSLRVPRGGMIFF--------KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLV--QGSKLQDF 862 +Y DVVTTTTHKSLR PRG MIFF KK + +LE IN +VFPG QGGPHNHTI LAV LK Q P +K YQ +VV N + + GYKL + G+D+H+VLVD++ G+DGAR E++L++ I NKN+VP DKSA P GIR+G+PAMTTRGF E++FV + D+I + +K + +KL+DF Sbjct: 232 EYADVVTTTTHKSLRGPRGAMIFFRRGLRKHDKKGNPIYYDLEDKINFSVFPGHQGGPHNHTITALAVALKQCQEPAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDF 434
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 8.712e-46 Identity = 101/229 (44.10%), Postives = 140/229 (61.14%), Query Frame = -3 Query: 191 KYCDVVTTTTHKSLRVPRGGMIFFKKDPVLG---VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQ--DFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 862 ++CD+V TTT K LR PRG +IF+++ V+L++ IN AVFP LQGGPHNHTI G+A L HA +PEF Y +VV N R L SRL LG +++GG+DNH++LVDLR G+DGA VE + D I+LN+N++ G+ S L P GIR+G+ A+T RGF +E + D I V++ +++ G K+ D + V LR RV AL +PI Sbjct: 233 EHCDIVMTTTQKGLRGPRGALIFYRRAVTKNGETVDLDARINFAVFPMLQGGPHNHTIAGIASALLHAGTPEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKL---CREMTGGRKMSKADLHRVTSDARVMGSEQVLVLRRRVCALAEAYPI 458
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA1_RALSO (Serine hydroxymethyltransferase 1 OS=Ralstonia solanacearum GN=glyA1 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.376e-45 Identity = 103/224 (45.98%), Postives = 135/224 (60.27%), Query Frame = -3 Query: 191 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 859 + D VTTTTHKSLR PRGG+I K E E AIN+A+FPG+QGGP H I G AV K AQSP FK YQ +VV N RA+A L+ G ++VSG +++H++LVDLR I G EK+L A+IT+NKN++P D + V GIR+GSPAMTTRGF E E V +A I + ++ +P+ N+A +R +V LT QFP+ Sbjct: 220 HADFVTTTTHKSLRGPRGGVILMK------AEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEAQSPTFKAYQEQVVKNARAMAETLMARGLRIVSGRTESHVMLVDLRAKSITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEGEAVKVAHLIADVLD----------------------NPHDEA--NIAAVRAKVAELTKQFPV 413
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.633e-45 Identity = 91/176 (51.70%), Postives = 124/176 (70.45%), Query Frame = -3 Query: 338 KYCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 862 +Y D VTTTTHK+LR PRGG+I K+ + I+ ++FPG+QGGP H I AV LK A + EFK YQ +++ N +AL++RL+E G++LVSGG+DNHL+LVDLR GI G EKILD IT NKN+VP D +S ++ GIR+G+PA+TTRGF E + + +AD IH+ + Sbjct: 218 EYADFVTTTTHKTLRGPRGGLILCKE------KYAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFKNYQVQILKNAKALSTRLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKNAVPFDTQSPMITSGIRLGTPAVTTRGFKEGDMLEVADIIHDAL 387
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_POLSQ (Serine hydroxymethyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=glyA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.643e-44 Identity = 102/226 (45.13%), Postives = 135/226 (59.73%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + D+VT+TTHKSLR PRGG+I K E E AIN+AVFPGLQGGP H I G A K A P FK YQ +VV+N +ALA L+ G ++VSGG+D+H++LVDLR + G E +L A+IT NKN +P D + +V GIR+GSPAMTTRGF E E V + +FI + ++ +PN N+A +R +V LT +FP+ G Sbjct: 219 HADIVTSTTHKSLRGPRGGIILMK------AEHEKAINSAVFPGLQGGPLMHVIAGKAAAFKEAAEPGFKDYQKQVVANAKALAETLIARGLRIVSGGTDSHVMLVDLRAKKMTGKEAEHVLGEAHITCNKNGIPNDPEKPMVTSGIRLGSPAMTTRGFKEAEAVQVGNFIADVLD----------------------NPNDP--ENIAKVRAQVAELTKRFPVYG 414
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_CALS8 (Serine hydroxymethyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glyA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.803e-44 Identity = 89/176 (50.57%), Postives = 123/176 (69.89%), Query Frame = -3 Query: 338 KYCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 862 +Y D VTTTTHK+LR PRGG+I K+ + I+ ++FPG+QGGP H I AV LK A + EF+ YQ +++ N +AL+ RL+E G++LVSGG+DNHL+LVDLR GI G EK LD IT NKN++P D +S +V GIR+G+PA+TTRGF E++ + +AD IH+ + Sbjct: 220 EYADFVTTTTHKTLRGPRGGLILCKE------KYAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFRNYQIQILKNAKALSERLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKRLDSLNITCNKNAIPFDTQSPMVTSGIRLGTPAVTTRGFKEEDMIEVADIIHDAL 389
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_RALPJ (Serine hydroxymethyltransferase OS=Ralstonia pickettii (strain 12J) GN=glyA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.660e-44 Identity = 102/226 (45.13%), Postives = 135/226 (59.73%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + D VTTTTHKSLR PRGG+I K E E AIN+A+FPG+QGGP H I G AV K A SPEFK YQ +VV N A+A L+ G ++VSG +++H++LVDLR I G EK+L A+IT+NKN++P D + V G+R+GSPAMTTRGF E E V +A I + ++ +P+ N+A +R +V LT QFP+ G Sbjct: 220 HADFVTTTTHKSLRGPRGGVILMK------AEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEQVVKNAAAMAETLMARGLRIVSGRTESHVMLVDLRAKKITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGFKEAEAVKVAHLIADVLD----------------------NPHDEA--NIAAVRAKVAELTKQFPVYG 415
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_DICTD (Serine hydroxymethyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.244e-44 Identity = 94/173 (54.34%), Postives = 115/173 (66.47%), Query Frame = -3 Query: 344 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 859 Y VT+TTHK+LR PRGG I KK E I+ AVFPG+QGGP H I AV K A SPEFK YQ ++V N +A+A L++LGY+LVSGG+DNHL+LVDLR GI G EK L+ A IT+NKN++P D + + GIRIG+PA+TTRG E E IA IHE Sbjct: 216 YAHFVTSTTHKTLRGPRGGFILCKK------EFAKEIDKAVFPGIQGGPLMHVIAAKAVAFKEAMSPEFKEYQKQIVLNAKAMAEELIKLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTITSGIRIGTPALTTRGMKEDEMRYIARLIHE 382
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_SYMTH (Serine hydroxymethyltransferase OS=Symbiobacterium thermophilum GN=glyA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.391e-43 Identity = 92/176 (52.27%), Postives = 115/176 (65.34%), Query Frame = -3 Query: 338 KYCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 862 ++ VVTTTTHK+LR PRGG I KK E I+ AVFPG+QGGP H I AV K P+++ Y +VV N +ALA L+E GY+LV+GG+DNHL+LVDLRP GI G E +LD IT+NKN++P D + +V GIRIG+PAMTTRG E E V IAD I + Sbjct: 215 EHAHVVTTTTHKTLRGPRGGAILCKK------EFAKEIDKAVFPGMQGGPLMHIIAAKAVAFKQLSDPDYRAYCGQVVKNAKALAQALLERGYRLVTGGTDNHLMLVDLRPKGITGRDAEHLLDRVSITVNKNAIPNDPEKPMVTSGIRIGTPAMTTRGMKEAEMVQIADLIDRAI 384
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_POLSJ (Serine hydroxymethyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=glyA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.391e-43 Identity = 97/224 (43.30%), Postives = 136/224 (60.71%), Query Frame = -3 Query: 191 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPI 859 + DVVT+TTHKSLR PRGG+I K E E AIN+A+FPGLQGGP H I AV K A SPEFK YQ +V++N R +A L + G ++VSG +++HL+LVDLR GI G E +L A++T+NKN++P D + +V G+RIG+PAMTTRGF ++E A+ I + ++ +A N+ +R +V ALT++FP+ Sbjct: 219 HADVVTSTTHKSLRGPRGGIILMK------AEHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALSPEFKTYQQQVLTNARIVAETLTQRGLRIVSGRTESHLMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEEARVTANLIADVLDNPRDAA------------------------NIEAVRAKVNALTSRFPV 412 The following BLAST results are available for this feature:
BLAST of CV885175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885175 ID=CV885175; Name=CV885175; organism=Citrus sinensis; type=EST; length=864bpback to top |