CV885175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_HALHL (Serine hydroxymethyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.016e-43 Identity = 97/226 (42.92%), Postives = 132/226 (58.41%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + D VT+TTHK+LR PRGG+I + +P +LE + VFPG QGGP H I G AV K A P+FK YQ +VV+N RA+A R++E GY +VSGG+DNHL L+DL P + G + L A IT+NKN+VP D +S V G+RIG+PA+TTRGF E E +AD+I + ++ N + V +RG VE + +FP+ G Sbjct: 219 HADAVTSTTHKTLRGPRGGIILARSNP----DLEKKFQSLVFPGTQGGPLMHAIAGKAVAFKEALEPDFKQYQEQVVANARAMARRVIERGYNVVSGGTDNHLFLMDLTPKNLTGKDADAALGRANITVNKNTVPNDPQSPFVTSGLRIGTPAITTRGFKEAEATRLADWICDVLD------------------------NMGDESVVERVRGEVEQICREFPVYG 416
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.016e-43 Identity = 92/182 (50.55%), Postives = 119/182 (65.38%), Query Frame = -3 Query: 317 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 859 Y DVVTTTTHK+LR PRGGMI K+ E I+ A+FPG QGGP H I A A PEFK YQ ++++N +ALA L+E G+ LVSGG+DNHL+LVDLR GI G + E +LD +IT NKN++P D + V GIR+G+PA+TTRGF EK+ +A+ I +TL+ K Sbjct: 218 YADVVTTTTHKTLRGPRGGMILCKE------EYAQLIDKAIFPGSQGGPLMHVIAAKAAAFGEALKPEFKAYQQQIINNAQALAKGLLERGFNLVSGGTDNHLILVDLRGTGITGKQAETLLDEVHITCNKNAIPFDPEKPFVTSGIRLGTPAVTTRGFKEKDMDKVAEII----ALTLQEK 389
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42 Identity = 94/171 (54.97%), Postives = 114/171 (66.67%), Query Frame = -3 Query: 350 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 859 Y DVVTTTTHK+LR PRGGMI + E +AI+ AVFPG+QGGP H I AV L AQ PEFK YQ ++V N RALA L E G++LV+GG+D HL+LVDLR G+ GA E +LD +T+NKN VP D + V GIRIG+PA+TTRG E V IA+ I Sbjct: 219 YADVVTTTTHKTLRGPRGGMILCPE------EYAAAIDKAVFPGIQGGPLMHVIAAKAVALGEAQRPEFKTYQEQIVKNARALAQALQERGFELVAGGTDTHLILVDLRNKGLTGAVAEDLLDRVDVTVNKNMVPFDPQPPRVTSGIRIGTPAVTTRGMKEDSMVQIAEVI 383
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_PELTS (Serine hydroxymethyltransferase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42 Identity = 91/176 (51.70%), Postives = 117/176 (66.48%), Query Frame = -3 Query: 335 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 859 Y DVVTTTTHK+LR PRGG+I K G + IN AVFPG+QGGP H I AV K A P FK YQ K+VSN RALA L+E G++LVSGG+DNHL+LVDLR I G +++ D +T+NKN+VP D + + GIRIG+PA+T+RG +E + V IA+ + +E Sbjct: 219 YADVVTTTTHKTLRGPRGGLILCKDAERYGTK----INRAVFPGVQGGPLMHVIAAKAVAFKEAMEPGFKEYQRKIVSNARALADALLERGFELVSGGTDNHLILVDLRSKKITGREAQELFDAVGVTVNKNAVPFDPQPPNIASGIRIGTPAVTSRGLNEDDMVQIAEIMDYAIE 390
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_ALHEH (Serine hydroxymethyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42 Identity = 89/169 (52.66%), Postives = 116/169 (68.64%), Query Frame = -3 Query: 350 DVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 853 DV TTTTHK+LR PRGG+I + + E+E +N+ VFPG QGGP H I G AV K A PEFK YQ +VV+N RA+A L+E GYK+VSGG+DNHL L+DL G+ G + L A+IT+NKN+VP D +S V G+RIG+PA+TTRGF E+E +A ++ Sbjct: 222 DVTTTTTHKTLRGPRGGLILARAN----AEVEKKLNSLVFPGTQGGPLMHAIAGKAVAFKEALEPEFKAYQQQVVANARAMAQGLIERGYKVVSGGTDNHLFLIDLVDKGLTGKAADAALGKAHITVNKNTVPNDPQSPFVTSGLRIGTPAITTRGFKEEECRELAGWM 386
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA2_BORPA (Serine hydroxymethyltransferase 2 OS=Bordetella parapertussis GN=glyA2 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.623e-42 Identity = 96/226 (42.48%), Postives = 132/226 (58.41%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + D VT+TTHKSLR PRGG+I K E+E A+N+A+FPG+QGGP H I AV K A SPEF+ Y +VV N + LA LV+ G ++VSG +++H++LVDLRP GI G E +L A+IT+NKN++P D + V GIR+G+PAMTTRGF E E A+ I + ++ + N+A +R RV LT + P+ G Sbjct: 219 HADFVTSTTHKSLRGPRGGVIMMK------AEVEKAVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFQDYAQQVVKNAKVLADTLVKRGLRIVSGRTESHVMLVDLRPKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIRLGTPAMTTRGFKEAEAELTANLIADVLDNPRDEA------------------------NIAAVRARVNELTARLPVYG 414
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_RHOFD (Serine hydroxymethyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glyA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.426e-42 Identity = 97/226 (42.92%), Postives = 136/226 (60.18%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + DVVT+TTHKSLR PRGG+I K + E AIN+A+FPGLQGGP H I AV K A PEFKVYQ +V++N R +A LV G ++VSG +++H++LVDLR I G E +L A++T+NKN++P D + +V G+RIG+PAMTTRGF ++E A+ I + ++ +P S N+ +R +V ALT +FP+ G Sbjct: 219 HADVVTSTTHKSLRGPRGGIILMK------AQHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLVSRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEEARITANLIADVLD----------------------NPRDSA--NIDAVRAKVNALTKRFPVYG 414
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_BORPE (Serine hydroxymethyltransferase OS=Bordetella pertussis GN=glyA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.426e-42 Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + D VT+TTHKSLR PRGG+I K E E A+N+A+FPG+QGGP H I AV K A SPEF+ Y +VV N + LA LV+ G ++VSG +++H++LVDLRP GI G E +L A+IT+NKN++P D + V GIR+G+PAMTTRGF E E A+ I + ++ + N+A +R RV LT + P+ G Sbjct: 219 HADFVTSTTHKSLRGPRGGVIMMK------AEFEKAVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFQDYAQQVVKNAKVLADTLVKRGLRIVSGRTESHVMLVDLRPKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIRLGTPAMTTRGFKEAEAELTANLIADVLDNPRDEA------------------------NIAAVRARVNELTARLPVYG 414
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA2_BORBR (Serine hydroxymethyltransferase 2 OS=Bordetella bronchiseptica GN=glyA2 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.426e-42 Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + D VT+TTHKSLR PRGG+I K E E A+N+A+FPG+QGGP H I AV K A SPEF+ Y +VV N + LA LV+ G ++VSG +++H++LVDLRP GI G E +L A+IT+NKN++P D + V GIR+G+PAMTTRGF E E A+ I + ++ + N+A +R RV LT + P+ G Sbjct: 219 HADFVTSTTHKSLRGPRGGVIMMK------AEFEKAVNSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFQDYAQQVVKNAKVLADTLVKRGLRIVSGRTESHVMLVDLRPKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIRLGTPAMTTRGFKEAEAELTANLIADVLDNPRDEA------------------------NIAAVRARVNELTARLPVYG 414
BLAST of CV885175 vs. ExPASy Swiss-Prot
Match: GLYA_PSEU5 (Serine hydroxymethyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=glyA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.475e-42 Identity = 97/226 (42.92%), Postives = 132/226 (58.41%), Query Frame = -3 Query: 185 YCDVVTTTTHKSLRVPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMAYITLNKNSVPGD-KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 859 + DVVTTTTHK+LR PRGG+I KK+ E+E +N+AVFPG QGGP H I AVC K A PEFK YQ +VV N +A+A ++ G+ +VSGG+ NHL L+ L I G + L A+IT+NKNSVP D +S V G+RIG+PA+TTRGF E E +A +I + ++ N + + +RG+VEA+ +FP+ G Sbjct: 219 FADVVTTTTHKTLRGPRGGLILAKKNE----EIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVVKNAQAMAEVFIQRGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAHITVNKNSVPNDPRSPFVTSGLRIGTPAVTTRGFGEAECRELAGWICDILD------------------------NMGDESVIDAVRGKVEAVCAKFPVYG 416 The following BLAST results are available for this feature:
BLAST of CV885175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885175 ID=CV885175; Name=CV885175; organism=Citrus sinensis; type=EST; length=864bpback to top |