CV885173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.944e-25 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELG LL GVTIAHGGVLPNINP+LLPKKS Sbjct: 72 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKS 130
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.526e-24 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAARDNKK RIIPRHVLLA+RNDEELGKLL GVTIAHGGVLPNINPVLLPKK+ Sbjct: 76 VLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKT 134
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.526e-24 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAARDNKK+RIIPRHVLLAVRNDEELGKLLAGVTIA GGVLPNINPVLLPKKS Sbjct: 69 VLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKS 127
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.602e-24 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAARDNKK RIIPRH+LLAVRNDEELGKLLAGVT AHGGVLPNINPVLLPKK+ Sbjct: 70 VLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKT 128
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A7_ARATH (Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.572e-24 Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAARDNKK+RIIPRH+LLA+RNDEELGKLL+GVTIAHGGVLPNIN VLLPKKS Sbjct: 72 VLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKS 130
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A1_PEA (Histone H2A.1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.292e-23 Identity = 54/58 (93.10%), Postives = 57/58 (98.28%), Query Frame = -3 Query: 273 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 446 VLELAGNAARDNKKNRI PRH+LLAVRNDEELGKLLAGVTIA+GGVLPNINPVLLPK+ Sbjct: 71 VLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLLPKR 128
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A3_WHEAT (Histone H2A.2.2 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.687e-23 Identity = 51/59 (86.44%), Postives = 59/59 (100.00%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAA+DNKK+RI+PRH+LLAVRND+ELG+LLAGVTIAHGGV+PNINPVLLPKK+ Sbjct: 69 VLELAGNAAKDNKKSRIVPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINPVLLPKKA 127
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A5_WHEAT (Protein H2A.5 OS=Triticum aestivum GN=H2A-2 PE=2 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 6.410e-23 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAA+DNKK RIIPRH+LLAVRND+ELG+LLAGVTIAHGGV+PNIN VLLPKKS Sbjct: 60 VLELAGNAAKDNKKTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLPKKS 118
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A2_WHEAT (Histone H2A.2.1 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.410e-23 Identity = 49/59 (83.05%), Postives = 58/59 (98.31%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAA+DNKK RI+PRH+LLA+RND+ELG+LL+GVTIAHGGV+PNINPVLLPKK+ Sbjct: 69 VLELAGNAAKDNKKTRIVPRHLLLAIRNDQELGRLLSGVTIAHGGVIPNINPVLLPKKA 127
BLAST of CV885173 vs. ExPASy Swiss-Prot
Match: H2A2_PEA (Histone H2A.2 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.410e-23 Identity = 53/59 (89.83%), Postives = 57/59 (96.61%), Query Frame = -3 Query: 270 VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 446 VLELAGNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIA+GGVLPNINPVLLPK++ Sbjct: 71 VLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRT 129 The following BLAST results are available for this feature:
BLAST of CV885173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885173 ID=CV885173; Name=CV885173; organism=Citrus sinensis; type=EST; length=652bpback to top |