CV885171

Overview
NameCV885171
Unique NameCV885171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.720e-44
Identity = 100/250 (40.00%), Postives = 148/250 (59.20%), Query Frame = -3
Query:  143 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSE--EFYSLPFNLN 886
            G P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G   +       + ++NV  ++  FV GCVAF LDNT+        ++RG   W K  S KG+   +  E Y+LPF +N
Sbjct:  368 GMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTGITGI-------DQVLNVLLTTAMFVGGCVAFILDNTI----PGTPEERGIKKWKKGVS-KGNKSLDGMESYNLPFGMN 605          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 2.246e-44
Identity = 100/250 (40.00%), Postives = 147/250 (58.80%), Query Frame = -3
Query:  143 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSE--EFYSLPFNLN 886
            G P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G   +       + ++NV  ++  FV GCVAF LDNT+        ++RG   W K  S KG    +  E Y+LPF +N
Sbjct:  369 GMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMVGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTGITGI-------DQILNVLLTTAMFVGGCVAFILDNTI----PGTPEERGIKKWKKGVS-KGSKSLDGMESYNLPFGMN 606          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.246e-44
Identity = 99/250 (39.60%), Postives = 147/250 (58.80%), Query Frame = -3
Query:  143 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSE--EFYSLPFNLN 886
            G P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G   +       + ++NV  ++  FV GCVAF LDNT+        ++RG   W K    KG+   +  E Y+LPF +N
Sbjct:  371 GLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTGITGI-------DQVLNVLLTTAMFVGGCVAFILDNTI----PGTPEERGIRKWKKGVG-KGNKSLDGMESYNLPFGMN 608          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 98/249 (39.36%), Postives = 144/249 (57.83%), Query Frame = -3
Query:  146 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSE--EFYSLPFNL 886
            G P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+V SRRV+Q  A FM+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G   +       + ++NV  ++  FV GC AF LDNT+        ++RG   W K    KG +  E  E Y LPF +
Sbjct:  369 GLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFIEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVASRRVIQYGAAFMLLLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFVDLNSSRNLFVLGFSIFFGLMLPSYLKQNPLVTGIAEI-------DQVLNVLLTTAMFVGGCTAFILDNTI----PGTPEERGIRKW-KRGVGKGTSGIEGMESYDLPFGM 605          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.117e-42
Identity = 94/248 (37.90%), Postives = 142/248 (57.26%), Query Frame = -3
Query:  146 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDT-RSEEFYSLPFNL 886
            G P+        M  A+   ++ES G ++A AR A A P P   ++RG+  +GV  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+    +GKF A+FAS+P PI+  ++C  F  + A GLS LQF ++NS R  F+LGFS+F GL++P Y +     +  G ++T     + ++ V  ++E FV GC+AF LDNT+        ++RG   W        +T  S + Y  PF +
Sbjct:  319 GLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLD-----SNPGAINTGVPEVDQILTVLLTTEMFVGGCLAFILDNTVPGSP----EERGLIQWKAGAHANSETLASLKSYDFPFGM 557          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.043e-41
Identity = 93/248 (37.50%), Postives = 142/248 (57.26%), Query Frame = -3
Query:  146 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDT-RSEEFYSLPFNL 886
            G P+        M  A+   ++ES G ++A AR A A P P   ++RG+  +G+  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+    +GKF A+FAS+P PI+  ++C  F  + A GLS LQF ++NS R  F+LGFS+F GL++P Y +     +  G ++T     + ++ V  ++E FV GC+AF LDNT+        ++RG   W        +T  S + Y  PF +
Sbjct:  319 GLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLD-----SNPGAINTGIPEVDQILTVLLTTEMFVGGCLAFILDNTVPGSP----EERGLIQWKAGAHANSETSASLKSYDFPFGM 557          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.780e-41
Identity = 90/172 (52.33%), Postives = 108/172 (62.79%), Query Frame = -3
Query:  365 PSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFG 880
            P+FD  ++FAMM ASFV L ESTG F+A ARY                                      +N GLLA+T+VGSRRV+QISA FM+FFS+ GKFGA FASIP PI+A+LYC+   +V + GLSFLQFCNLNSF  KFILGFS F+ +S+PQYF EY   NG G
Sbjct:  266 PTFDITDSFAMMAASFVTLFESTGLFYASARYG-------------------------------------KNVGLLAMTKVGSRRVIQISAAFMLFFSIFGKFGAFFASIPLPIMASLYCIVLCFVSSAGLSFLQFCNLNSFNTKFILGFSFFMAISIPQYFREY--YNGVG 398          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.507e-40
Identity = 85/209 (40.67%), Postives = 128/209 (61.24%), Query Frame = -3
Query:  260 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTL 886
            G P+  A     M  A+   ++ES G ++A AR A A P P   ++RG+  +G+  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  A  M+    +GKF A+FAS+P PI+  ++C  F  + A GLS LQF ++NS R  F+LGFS+F GL++P Y       +  G ++T     + ++ V  ++E FV GC+AF LDNT+
Sbjct:  312 GLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIMLVLGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLE-----SNPGAINTGILEVDQILIVLLTTEMFVGGCLAFILDNTV 515          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 1.046e-33
Identity = 86/267 (32.21%), Postives = 140/267 (52.43%), Query Frame = -3
Query:  134 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEY----------------TAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYF 886
            G P F+   AF M + S +A V+S G++ A +   ++ P    V+SR +G +G   +L+GL+GT  G++   EN   +A+T++GSRRVV++ A  ++ FS++GK G   ASIP  +VA+L C  +A   A GLS L++    S R   I+G S+F  LSVP YF +Y                  ++  GP  +  +  N ++N   S    +A  +A  LDNT+       +++RG + W    +   +    + Y LPF + ++F
Sbjct:  439 GVPLFNWKMAFVMCVVSVIASVDSVGSYHASSLLVASRPPTRGVVSRAIGLEGFTSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRVVELGACVLVIFSLVGKVGGFLASIPQVMVASLLCFMWAMFTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSVPAYFQQYGISPNSNLSVPSYYQPYIVSSHGPFKSQYKGMNYVMNTLLSMSMVIAFIMAVILDNTVPGS----KQERGVYVWSDSETATREPALAKDYELPFRVGRFF 701          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 83/265 (31.32%), Postives = 132/265 (49.81%), Query Frame = -3
Query:  134 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGF--------------GPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYF 886
            G P+F    +  M+  S VA V+S G + + +   +A      ++SRG+  +G   LL+G++G+  G++   EN   + +T+V SRR + I A F+I  S LGK GA+ ASIP  + A++ C  +A   + GLS L++    SFR   I+G S+F+GLS+P YF +Y  ++                GP  T     +  +N   S    V   +AF LDNT+       +++RG + W +    + D      YSLP    + F
Sbjct:  444 GFPNFHMRTSIIMIFVSLVASVDSVGTYHSASMIVNAKRPTRGIVSRGIALEGFCSLLAGIWGSGTGSTTLTENIHTINITKVASRRALVIGAMFLIVLSFLGKLGAILASIPQALAASVLCFIWALTVSLGLSNLRYTQTASFRNITIVGVSLFLGLSIPAYFQQYQPLSSLILPSYYIPFGAASSGPFQTGIEQLDFAMNAVLSLNMVVTFLLAFILDNTVPGS----KEERGVYVWTRAEDMQMDPEMRADYSLPRKFAQIF 704          
The following BLAST results are available for this feature:
BLAST of CV885171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
S23A2_RAT1.720e-4440.00Solute carrier family 23 member 2 OS=Rattus norveg... [more]
S23A2_MOUSE2.246e-4440.00Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A2_HUMAN2.246e-4439.60Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A2_XENTR1.456e-4339.36Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
S23A1_RAT6.117e-4237.90Solute carrier family 23 member 1 OS=Rattus norveg... [more]
S23A1_MOUSE1.043e-4137.50Solute carrier family 23 member 1 OS=Mus musculus ... [more]
NAT9_ARATH1.780e-4152.33Putative nucleobase-ascorbate transporter 9 OS=Ara... [more]
S23A1_HUMAN1.507e-4040.67Solute carrier family 23 member 1 OS=Homo sapiens ... [more]
NAT12_ARATH1.046e-3332.21Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT11_ARATH6.345e-3131.32Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885171 ID=CV885171; Name=CV885171; organism=Citrus sinensis; type=EST; length=888bp
CTATCTTTTACTGCTATAGCGTGTAATAAGAGATTCACAAGAGAGCAATG
ATGATATTTTGTGTGTTCCCACAAGGACTTTTGGAAAACTTCCCAAAGAG
AAATACATGTTACCGATTGAATCACACAGATGGGAAATATTTGTTTAAAT
TGAAGGGCAGGGAGTAAAATTCTTCACTTCTTGTGTCGCCTTTGAAGGAC
CAGAACTTGTCCCACCAATGCCTACCCCTGTCTTTCCTGACTTGACCATC
CTTTTTATGCAGTGTGTTGTCAAGGAAAAATGCCACACAACCAGCAACAA
ATGGTTCTGAGGAGAAAGGAACGTTTACCATATCGTTGAACCATCTTCCA
CTAGTGTGAACTGGACCGAAACCATTAATGGCAGTGTACTCGTTGAAGTA
TTGGGGCACAGACAGACCGATGAAGATAGAGAAGCCTAATATGAACTTTA
CTCGGAAACTGTTGAGGTTACAGAACTGAAGGAAGCTAAGACCTCCAGCA
CCCACATATGCAAAGAAAAGGCAATATAAAGCAGCAACAATCGGTGCTGG
AATTGAAGCAAAGACTGCTCCAAATTTCCCAAGAACAGAGAAGAATATCA
TGAATCCAGCAGATATTTGGACAACCCTTCGACTGCCAACTCTAGTCAAG
GCCAAAAGACCCGCATTCTCTACAGACACCGATGTTCCGTTTACAGTTCC
AAATAACCCAGAAAGCAAAATGCCAACTCCCTGCCAACCCACACCACGGC
TGAGAACAGAAGGTGGCATTGGAGTTGCACTTGCATACCGTGCTACCGCA
AAAAAAGCACCAGTTGACTCAACAAGAGCAACAAAGGAGGCCATCATCAT
GGCAAAAGCTTCACCAGCATCAAATGAAGGCGCCCCCC
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