CV885171

Overview
NameCV885171
Unique NameCV885171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A3_MOUSE (Solute carrier family 23 member 3 OS=Mus musculus GN=Slc23a3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.039e-20
Identity = 61/196 (31.12%), Postives = 101/196 (51.53%), Query Frame = -3
Query:  260 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAI--NGFGPVHTSGRWFNDMVNVPFSSEP-FVAGCVAFFLDNTL 838
            +  A   S G +    +    +P PP   SRG+  +G+G +L+GL G+  GT+ S  N G ++L + GSRRV  +   F +   +  +   +F SIP P++  +  +  A V + G S     +++S R  FI+GFSIF+ L +P++  E   +   G+ P+        DM      +EP F+AG + F L+NT+
Sbjct:  327 ALAASTSSLGCYALCGQLLRLSPPPPHACSRGLSLEGLGSVLAGLLGSPLGTASSFPNVGTVSLFQTGSRRVAHLVGLFCMGLGLSPRLAQLFTSIPLPVLGGVLGVTQAVVLSAGFSSFHLADIDSGRNVFIVGFSIFMALLLPRWLREAPVLLNTGWSPL--------DMFLRSLLAEPIFLAGLLGFLLENTI 514          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: S23A3_HUMAN (Solute carrier family 23 member 3 OS=Homo sapiens GN=SLC23A3 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 66/246 (26.83%), Postives = 114/246 (46.34%), Query Frame = -3
Query:  125 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRW--FNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWS------FKGDTRSEEFYSLPFNLNKYFPSV 838
            +  A   S G +    R     P PP   SRG+  +G+G +L+GL G+  GT+ S  N G + L + GS++V  +     +   +  +   +  +IP P+V  +  +  A V + G S     +++S R  FI+GFSIF+ L +P++F E        PV  S  W   + +++   +   F+AG   F L+NT+     Q+ +  G+     F +       K   ++ + Y LPF +    P +
Sbjct:  324 ALAASTSSLGCYALCGRLLHLPPPPPHACSRGLSLEGLGSVLAGLLGSPMGTASSFPNVGKVGLIQAGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIFIVGFSIFMALLLPRWFRE-------APVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTI--PGTQLERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCI 560          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: PUCJ_BACSU (Uric acid permease pucJ OS=Bacillus subtilis GN=pucJ PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16
Identity = 50/172 (29.07%), Postives = 89/172 (51.74%), Query Frame = -3
Query:  380 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGL---SVPQYFNEYTA 886
            GAP+F+ G    M++   V +VESTG F+A+ +     P+    L +G   +G+ IL+ GLF      + + +NAGLL LT+V +R +V  +   ++   ++ K  A+ +++PA ++     + F  V A G+  L   +L +      +  SI +G+   + P  F E+ A
Sbjct:  228 GAPAFEIGPILTMLIVGIVIIVESTGVFYAIGKICGR-PLTDKDLVKGYRAEGIAILIGGLFNAFPYNTFA-QNAGLLQLTKVKTRNIVVTAGCILVCLGLIPKIAALASAVPAAVLGGATVVMFGMVIASGVKMLSTADLKNQYHLLTIACSIALGIGASTAPGIFAEFPA 397          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: PUCK_BACSU (Uric acid permease pucK OS=Bacillus subtilis GN=pucK PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.498e-13
Identity = 49/168 (29.17%), Postives = 88/168 (52.38%), Query Frame = -3
Query:  392 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGL---SVPQYFN 886
            G P+F+      M++ + V+LVESTG +FA+A   +   +    L +G   +G+ ILL GLF     T+ S +N G++ L+++ S  V+ I+   ++   ++ K  A+   IP P++     + F  V + G+  L   +L+S     I+  S+ +GL   +VP  F+
Sbjct:  225 GPPTFELPAVVTMLLVAIVSLVESTGVYFALADITNRR-LSEKDLEKGYRAEGLAILLGGLFNAFPYTAFS-QNVGIVQLSKMKSVNVIAITGIILVAIGLVPKAAALTTVIPTPVLGGAMIVMFGMVISYGIKMLSSVDLDSQGNLLIIASSVSLGLGATTVPALFS 390          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: PBUX_BACSU (Xanthine permease OS=Bacillus subtilis GN=pbuX PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 47/160 (29.38%), Postives = 77/160 (48.12%), Query Frame = -3
Query:  407 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSV 886
            GAPSF A     M + + V+LVESTG +FA+    +   +    LS+G   +G+ +LL G+F     T+ S +N GL+ LT +    V+ ++   ++ F +  K  A    IP+ ++       F  V A G+  L   +        I+  S+ +GL V
Sbjct:  223 GAPSFHAAPIITMSIVAIVSLVESTGVYFALGDLTNRR-LTEIDLSKGYRAEGLAVLLGGIFNAFPYTAFS-QNVGLVQLTGIKKNAVIVVTGVILMAFGLFPKIAAFTTIIPSAVLGGAMVAMFGMVIAYGIKMLSRIDFAKQENLLIVACSVGLGLGV 380          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: YGFU_ECOLI (Putative purine permease ygfU OS=Escherichia coli (strain K12) GN=ygfU PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12
Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = -3
Query:  410 GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVK-FILGFSIFIGLS 886
            G P FD      M     +  +ES G F A+            ++ RG+   GVG ++ G F +   TS S +N GL+++TRV SR V   S   +I F ++ K   + ASIP  ++     + F  V A G+  L  CN  + R   +I+  S+ +G++
Sbjct:  248 GMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDII-RGLRVDGVGTMIGGTFNSFPHTSFS-QNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMT 405          
BLAST of CV885171 vs. ExPASy Swiss-Prot
Match: Y397_CLOPE (Putative purine permease CPE0397 OS=Clostridium perfringens GN=cpx PE=3 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = -3
Query:  407 SFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSV 877
            +FDA    A + A FVA + + G   A+    S   +    ++ GV   GVG  L GL G+   TS S +N G+++LT+V SR V  ++   ++    L K  A+   IP P++  +  + F  V A G+  L    L   R   I+  S+ +GL V
Sbjct:  243 TFDAKAVMAFIPAYFVATIGTVGCLKAIGE-TSNIDIGDKRVAAGVLSDGVGSALGGLVGSCPNTSFS-QNIGIISLTKVASRHVAVMAGILLVILGFLPKVAAIITGIPNPVLGGVGIMMFGTVAAAGIRTLSNIKLTE-RNLLIIAISMGLGLGV 396          
The following BLAST results are available for this feature:
BLAST of CV885171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
S23A3_MOUSE5.039e-2031.12Solute carrier family 23 member 3 OS=Mus musculus ... [more]
S23A3_HUMAN3.611e-1826.83Solute carrier family 23 member 3 OS=Homo sapiens ... [more]
PUCJ_BACSU9.835e-1629.07Uric acid permease pucJ OS=Bacillus subtilis GN=pu... [more]
PUCK_BACSU3.498e-1329.17Uric acid permease pucK OS=Bacillus subtilis GN=pu... [more]
PBUX_BACSU5.051e-1229.38Xanthine permease OS=Bacillus subtilis GN=pbuX PE=... [more]
YGFU_ECOLI6.597e-1230.00Putative purine permease ygfU OS=Escherichia coli ... [more]
Y397_CLOPE1.125e-1131.21Putative purine permease CPE0397 OS=Clostridium pe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885171 ID=CV885171; Name=CV885171; organism=Citrus sinensis; type=EST; length=888bp
CTATCTTTTACTGCTATAGCGTGTAATAAGAGATTCACAAGAGAGCAATG
ATGATATTTTGTGTGTTCCCACAAGGACTTTTGGAAAACTTCCCAAAGAG
AAATACATGTTACCGATTGAATCACACAGATGGGAAATATTTGTTTAAAT
TGAAGGGCAGGGAGTAAAATTCTTCACTTCTTGTGTCGCCTTTGAAGGAC
CAGAACTTGTCCCACCAATGCCTACCCCTGTCTTTCCTGACTTGACCATC
CTTTTTATGCAGTGTGTTGTCAAGGAAAAATGCCACACAACCAGCAACAA
ATGGTTCTGAGGAGAAAGGAACGTTTACCATATCGTTGAACCATCTTCCA
CTAGTGTGAACTGGACCGAAACCATTAATGGCAGTGTACTCGTTGAAGTA
TTGGGGCACAGACAGACCGATGAAGATAGAGAAGCCTAATATGAACTTTA
CTCGGAAACTGTTGAGGTTACAGAACTGAAGGAAGCTAAGACCTCCAGCA
CCCACATATGCAAAGAAAAGGCAATATAAAGCAGCAACAATCGGTGCTGG
AATTGAAGCAAAGACTGCTCCAAATTTCCCAAGAACAGAGAAGAATATCA
TGAATCCAGCAGATATTTGGACAACCCTTCGACTGCCAACTCTAGTCAAG
GCCAAAAGACCCGCATTCTCTACAGACACCGATGTTCCGTTTACAGTTCC
AAATAACCCAGAAAGCAAAATGCCAACTCCCTGCCAACCCACACCACGGC
TGAGAACAGAAGGTGGCATTGGAGTTGCACTTGCATACCGTGCTACCGCA
AAAAAAGCACCAGTTGACTCAACAAGAGCAACAAAGGAGGCCATCATCAT
GGCAAAAGCTTCACCAGCATCAAATGAAGGCGCCCCCC
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