CV885170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEE4 (3-ketoacyl-CoA thiolase OS=Pseudomonas entomophila (strain L48) GN=fadA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.615e-25 Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF G Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKIDPKEVEDVIWGCVNQTMEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.615e-25 Identity = 79/235 (33.62%), Postives = 115/235 (48.94%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 D+V+V A RTA+ KAK G F++ A++L A V++A+ ++ L P+EV D++ G V R AA G P TVP +TVNR C S + A+ IKAG+ D I G+E M ++ VNP + A + MG+T+E + + GV R+EQD G F +EI+ V D + I D+ IR + + D+ KLKP F G Sbjct: 7 DIVVVDAVRTAMAKAKHGAFRNVRAENLSAAVMQALFDRNANLVPAEVDDVIWGCVNQTLEQSMNIARNAAIMTGIPRTVPAQTVNRLCGSSMSALHIATANIKAGMGDFYIIGGVEHMEHVPMTHGVDVNPAASKY--AAKAAMMMGLTAELLGKMHGVGREEQDAFGVRSHQRAQAANENGYFDNEIVGVEGHDADGFLRL-----IDRDEVIRQDANLEDMGKLKPVFDPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.333e-25 Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF G Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.333e-25 Identity = 79/235 (33.62%), Postives = 121/235 (51.49%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G ++T A+D+ A ++ ++E+ T+++P+EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QD GKFKDEIIP+ + G K T D+ IRP TT+ LA LKPAF G Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQGY---DENGFLK--TFDYDETIRPETTLESLAALKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.333e-25 Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF G Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.333e-25 Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF G Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.577e-25 Identity = 78/235 (33.19%), Postives = 117/235 (49.79%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G +++ ADDL A ++ ++ + L+P+++ D++ G V+ G R AG P TVP +TVNR C S + A+ A I AGL D+ + G+E M I + V+P + MG+T+E ++ G+TR+ D GKF EII +I +TG I D+ IRP+TT+ L+KLKPAF G Sbjct: 7 DVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHM--GHIDMNQHVDPNPALGHSVAQAAGSMGLTAEYLSLLHGITREAMDEFGARSHRKAAEATEQGKFAREII---ARIGHDETGAP--TLIKHDETIRPDTTVEALSKLKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.577e-25 Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G ++T A+D+ A ++ ++E+ +++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF G Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: THIL_CHRVI (Acetyl-CoA acetyltransferase OS=Chromatium vinosum GN=phbA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.134e-24 Identity = 83/249 (33.33%), Postives = 125/249 (50.20%), Query Frame = 3 Query: 231 DDVVIVAAYRTAICKAKRGGFKDTL-ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLL-----------PMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN--TKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 +++VIV A R+AI GG +L A ++ VLK ++ +T L P ++ ++++G VL G + R +AG P +VP T+N+ C SGL+AV AI G DI IA G ESM+ +S + + + +D ++ MG T+EN+AQ++G TR++QD G+F+DEIIP+ + DPK D+ R TT L KL+PAF KDG Sbjct: 3 ENIVIVDAGRSAI--GTFGGSLSSLSATEIGTAVLKGLLARTGLAPEQIDEVILGQVLTAGVGQN-PARQTTLHAGLPHSVPAMTINKVCGSGLKAVHLAMQAIACGDADIVIAGGQESMSQSSHVLPRSRDGQRMGDWSMKDTMIVDGLWDAFNNYHMGTTAENIAQKYGFTREQQDAFAAASQQKTEAAQKAGRFQDEIIPIEIPQRKGDPK-------VFDADEFPRHGTTAESLGKLRPAFSKDG 241
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.753e-24 Identity = 76/238 (31.93%), Postives = 122/238 (51.26%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFKKDG 935 DVVIV RT + ++K G ++T A+D+ A ++ V+E+ ++++P EV D++ G V RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G++R++QD GKFKDEIIP+ G ++ + + D+ IRP+TT+ LA LKPAF G Sbjct: 7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKG 234 The following BLAST results are available for this feature:
BLAST of CV885170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885170 ID=CV885170; Name=CV885170; organism=Citrus sinensis; type=EST; length=935bpback to top |