CV885170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.294e-21 Identity = 73/238 (30.67%), Postives = 117/238 (49.16%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFKKDG 935 D VIV RT + ++K G ++T A+ + A ++ V+E+ +++P+EV D++ G V RMA+ P T +TV+R C S + A+ AI+ G D+ + G+E M + ++ V+P + A MG+T+E + + G++R+ QD GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF G Sbjct: 7 DAVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKVLERNAKIDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAVQAIQTGNGDVFVVGGVEHM--GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDAFGERSHRLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDYDETIRPETTLESLATLKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: THIL_MYCLE (Probable acetyl-CoA acetyltransferase OS=Mycobacterium leprae GN=fadA4 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.691e-21 Identity = 85/250 (34.00%), Postives = 122/250 (48.80%), Query Frame = 3 Query: 240 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------------VNSISVVGQV--NPKVEIFTQARDCLLPMGITSE--NVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 VIV RT I K G KD A DL A + A ++K + PS V +++G VL G+ + M R AA AG VP T+N+ C SGL A+A I+AG +D+ +A G ESMT +++V + + ++FT PMG +E N ++F TRQEQD G F DE++PV+ P++ + + + D+GIR NT+ LA LKPAF+ G Sbjct: 5 VIVTGARTPIGKLM-GSLKDFSASDLGAITIAAALKKANVAPSIVQYVIIGQVLTAGAGQ-MPARQAAVAAGIGWDVPALTINKMCLSGLDAIALADQLIRAGEFDVVVAGGQESMTKAPHLLMDSRSGYKYGDVTIVDHLAYDGLHDVFTNQ-----PMGALTEQRNDVEKF--TRQEQDEFAARSHQKAAAAWKDGVFADEVVPVSI----PQSKGDS-LQFTEDEGIRANTSAESLAGLKPAFRCGG 240
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.691e-21 Identity = 71/229 (31.00%), Postives = 112/229 (48.91%), Query Frame = 3 Query: 240 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 923 VIV RT + ++K G FK+ A+DL A ++K ++++ ++P+ + DI G V R AA AG P +VP TVNR C S +QA+ D A AI G D + G+E M ++ +P + T MG+T+E +A G++R++QD G+F+ EI+ + D + + D+ IRP TT+ L+KL+P F Sbjct: 5 VIVDCIRTPMGRSKGGVFKNKRAEDLSAHLMKGLLDRNPAVDPASIDDIYWGCVQQTLEQGFNVARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGAGDTYLIGGVEHMGHVPMTHGNDFHP--GLATSIAQAAGSMGLTAEYLATLHGISREQQDEFAYRSHQRAQAATVEGRFRREILAMEGHAADGSL-----ILVEDDEVIRPETTVEGLSKLRPVF 226
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.691e-21 Identity = 73/231 (31.60%), Postives = 115/231 (49.78%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 923 D+VIV RT + ++K G F+ T A+DL A ++K ++E+ ++P E+ DI G V R +A AG P V TVNR C S +QA+ D AI G DI +A G+E M + + ++ + MG+T+E ++++FG+TR++QD G+F EI +N D + V ++ D+ IRP TT L++L+P F Sbjct: 3 DIVIVDCIRTPMGRSKNGVFRHTRAEDLSAALMKGLLERNPEVDPEELEDIYWGCVQQTLEQGFNIARNSALIAGIPHKVAGVTVNRLCGSSMQALHDATRAIMNGDGDIFMAGGVEHM--GHVPMTHGIDFHPGMNKSVAKASGSMGMTAELLSRKFGITREQQDEFGARSHRKAHEATVEGRFAKEIYAMNGHNADGEL-----VRVTEDEVIRPETTAEGLSQLRPVF 226
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSEU5 (3-ketoacyl-CoA thiolase OS=Pseudomonas stutzeri (strain A1501) GN=fadA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.766e-21 Identity = 72/235 (30.64%), Postives = 116/235 (49.36%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 D VIV RT + ++K G ++T A+ + A ++ ++ + +++P+EV D++ G V RMA+ P T +TV+R C S + A+ AI+ D+ + G+E M +S++ V+P ++ A MG+T+E + + G+TR+ QD GKFKDEIIP+ + G K D+ IRP TT+ LA+LKPAF G Sbjct: 7 DAVIVDFGRTPMGRSKGGMHRNTRAETMSAQLIDGLLARNPKIDPAEVEDVIWGCVNQTLEQGWNIARMASLLTRIPHTSAGQTVSRLCGSSMSALHTAVQAIQTNNGDVFVIGGVEHM--GHVSMMHGVDPNPQLSLHAAKASGMMGLTAEMLGKMHGITREAQDQFGYRSHQLAWKATQEGKFKDEIIPMEG---HDENGFLK--VFDYDETIRPETTLEGLAELKPAFNPKG 234
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.766e-21 Identity = 86/248 (34.68%), Postives = 120/248 (48.39%), Query Frame = 3 Query: 243 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV------NPKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 IV A RT + GG ADDL A + A+IE+ +N ++V D++ G G RM+A AG P VP TVNR C S L A+A A AIKAG + IA G+ESM+ + V+G+ K+E T + P M T+ENVA++FG+ R++QD G F EI+PV + + G + V I+ D+ R +TT+ LAKLK K +G Sbjct: 6 IVDAIRTPFGRYA-GGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS-RAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVT---IPQRKG--EPVVIATDEHPRASTTLEGLAKLKGVVKPEG 246
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.919e-21 Identity = 86/248 (34.68%), Postives = 119/248 (47.98%), Query Frame = 3 Query: 243 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV------NPKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 935 IV A RT + GG ADDL A + A+IE+ +N ++V D++ G G RM+A AG P VP TVNR C S L A+A A AIKAG + IA G+ESM+ + V+G+ K+E T + P M T+ENVA++FG+ R++QD G F EI+PV + + G + V I D+ R +TT+ LAKLK K +G Sbjct: 6 IVDAIRTPFGRYA-GGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS-RAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVT---IPQRKG--EPVVIDTDEHPRASTTLEGLAKLKGVVKPEG 246
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.919e-21 Identity = 73/232 (31.47%), Postives = 114/232 (49.14%), Query Frame = 3 Query: 231 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 923 ++VVIV RT + ++K G F++ A+DL A ++K +I + +L+P+ + DI G V R A+ AG P TV TVNR C S +QA+ D AI G + I G+E M + + V+ + MG+T+E + + G++RQ QD G+FK+EI+P+ + G+ K D+ IRP TT+ L+ L+PAF Sbjct: 2 NNVVIVDCIRTPMGRSKAGAFRNVRAEDLSAHLMKGLISRNPQLDPNSIEDIYWGCVQQTLEQGFNVARNASLLAGIPHTVAATTVNRLCGSSMQALHDATRAIMVGDAETCIIGGVEHM--GHVPMNHGVDFHPGMSKSVAKAAGMMGLTAEMLGRMHGISRQMQDEFAARSHQRAHAATIEGRFKNEILPIEG---HDENGILK--LYDYDEVIRPETTVEGLSNLRPAF 226
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.390e-21 Identity = 69/230 (30.00%), Postives = 110/230 (47.83%), Query Frame = 3 Query: 234 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 923 DVVIV R+A+ K K G F+ AD + A +++A++E+ +P +V DI+ G V R AG P+T +TVNR C S +QA+ A I G D+ I G+E M + ++ ++ E MG+T+E + + +TR+EQD G+F +EII ++ + +VD+ IRP+ T+ + KL+PAF Sbjct: 8 DVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTVNRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM--GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNNITREEQDAFGLESHRRAWAATTEGRFDNEIIG-----IEGHDAAGRLQLCTVDEVIRPDATMEQMQKLRPAF 230
BLAST of CV885170 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.390e-21 Identity = 65/232 (28.02%), Postives = 113/232 (48.71%), Query Frame = 3 Query: 231 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 923 +DVVI+ A R+ + K K G F++ A++L A ++K + ++ ++ +V D++ G V R + AG P T +TVNR C S + A+ A AI G D+ + G+E M + ++ V+ + + MG+T+E + + GV+R++QD G+F +EI+ + D ++ + VD+ IRP T++ LAKL P F Sbjct: 6 NDVVIIDAVRSPMGKTKNGVFRNVRAENLSAALVKELFKRNPNVDQKDVEDLIWGCVNQTLEQGFNMARAVSLLAGLPITCAAQTVNRLCGSSMSAIHTAAQAIMTGQGDVFVVGGVEHM--GHVGMMHGVDVNPALSKHMAKASMMMGVTAEMLGKMHGVSREDQDAFAVRSHRLAHEATLQGRFNNEIVSIEGHDAD-----GNKILVEVDEVIRPETSMESLAKLAPVF 230 The following BLAST results are available for this feature:
BLAST of CV885170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885170 ID=CV885170; Name=CV885170; organism=Citrus sinensis; type=EST; length=935bpback to top |