CV885169

Overview
NameCV885169
Unique NameCV885169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: FADA_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.879e-46
Identity = 112/235 (47.66%), Postives = 146/235 (62.13%), Query Frame = -1
Query:  196 GVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 888
            G++R+ QD               SG FK+EI+P     VD   GV K+     D+ IRP TT+  L+ L+PAF    GT TAG +S +SDGA A+L+M  S A + GL      RS + VG DPS+MG GP  A   A+K AGL   +I++FE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +GAR   TL++ M+R  KD +FG+ +MCIG G G A VFER
Sbjct:  159 GISREMQDQFAARSHARAWAATQSGAFKNEILPTGGHDVD---GVLKQYYY--DEVIRPETTVEALSALRPAFDPVTGTVTAGTSSALSDGAAAMLVMSESRARELGLTPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASEIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER--KDAQFGLATMCIGLGQGIATVFER 386          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: FADA_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.879e-46
Identity = 113/235 (48.09%), Postives = 144/235 (61.28%), Query Frame = -1
Query:  196 GVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 888
            G++R+ QD               S  FK+EIIP      D   GV K+   + D+ IRP TT+  LA L+PAF   +G  TAG +S +SDGA A+L+M  S A + GL      RS + VG DPS+MG GP  A   A+K AGL   DI +FE+NEAFA+Q + CIK LGL     EK+N+NGGA+ALGHPLG +GAR   TLL+ M+R  KD +FG+ +MCIG G G A VFER
Sbjct:  159 GISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDAD---GVLKQ--FNYDEVIRPETTVEALATLRPAFDPVNGMVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER--KDVQFGLATMCIGLGQGIATVFER 386          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THLA_STAAW (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0330 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.454e-46
Identity = 96/234 (41.03%), Postives = 149/234 (63.68%), Query Frame = -1
Query:  196 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 897
            +++G++R+EQD               +G+F  EI+PV+   +  + G  + + ++ D+G+R N ++  L++L+PAFKKDGT TAGNAS ++DGA  +L+M    A +  +  L V   F + GVDPS+MGI P  A+  A+K +  ++ DI++FE+NEAFA+Q +   ++L L PEKVNV GGA+ALGHP+GA+GAR + TLL ++     +   G+ S+CIG G   AAV  +
Sbjct:  166 EQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVS---IPQRKG--EPILVTKDEGVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQL---NDEVETGLTSLCIGGGQAIAAVVSK 391          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.454e-46
Identity = 96/234 (41.03%), Postives = 149/234 (63.68%), Query Frame = -1
Query:  196 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 897
            +++G++R+EQD               +G+F  EI+PV+   +  + G  + + ++ D+G+R N ++  L++L+PAFKKDGT TAGNAS ++DGA  +L+M    A +  +  L V   F + GVDPS+MGI P  A+  A+K +  ++ DI++FE+NEAFA+Q +   ++L L PEKVNV GGA+ALGHP+GA+GAR + TLL ++     +   G+ S+CIG G   AAV  +
Sbjct:  166 EQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVS---IPQRKG--EPILVTKDEGVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQL---NDEVETGLTSLCIGGGQAIAAVVSK 391          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THLA_STAAR (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0351 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 95/234 (40.60%), Postives = 149/234 (63.68%), Query Frame = -1
Query:  196 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 897
            +++G++R+EQD               +G+F  EI+PV+   +  + G  + + ++ D+G+R N ++  L++L+PAFKKDGT TAGNAS ++DGA  +L+M    A +  +  L V   F + GVDP++MGI P  A+  A+K +  ++ DI++FE+NEAFA+Q +   ++L L PEKVNV GGA+ALGHP+GA+GAR + TLL ++     +   G+ S+CIG G   AAV  +
Sbjct:  166 EQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVS---IPQRKG--EPIVVTKDEGVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPAIMGIAPVDAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQL---NDEVETGLTSLCIGGGQAIAAVVSK 391          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THLA_STAAB (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 96/234 (41.03%), Postives = 148/234 (63.25%), Query Frame = -1
Query:  196 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 897
            +++G++R+EQD               +G F  EI+PV+   +  + G  + + ++ D+G+R N ++  L++L+PAFKKDGT TAGNAS ++DGA  +L+M    A +  +  L V   F + GVDPS+MGI P  A+  A+K +  ++ DI++FE+NEAFA+Q +   ++L L PEKVNV GGA+ALGHP+GA+GAR + TLL ++     +   G+ S+CIG G   AAV  +
Sbjct:  166 EQYGISREEQDTFAVNSQKKAANAQQNGGFDSEIVPVS---IPQRKG--EPIVVTKDEGVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQL---NDEVETGLTSLCIGGGQAIAAVVSK 391          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 110/234 (47.01%), Postives = 143/234 (61.11%), Query Frame = -1
Query:  196 VTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 885
            ++RQ QD               +  F  EI+  N    D   G+ KR     D+ IRP T +A LA L+PAF   +GT TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL+++DI LFE+NEAFA+Q + C+K LGL     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A +FER
Sbjct:  160 ISRQSQDEFAVRSHQRAYAATQADHFAKEIVATNGHDAD---GILKR--FDFDEVIRPETNLAGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLKLEDIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR--DVQFGLATMCIGLGQGIATIFER 386          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 110/235 (46.81%), Postives = 143/235 (60.85%), Query Frame = -1
Query:  196 GVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG-LDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 888
            G+TR++QD                GKFKDEIIP+       + G  K      D+ IRP TT+  LA LKPAF  K GT TAG +SQ++DGA  +++M    A   G+  + V RS +  GVDP++MG GP  A   A+K AGL I+DI+ FE+NEAFA+Q +  +K L  LD   EKVN++GGA+ALGHP G +GAR   TLL+ MK+ G    FGV +MCIG G G + VFER
Sbjct:  163 GITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQGY---DENGFLK--LFDYDETIRPETTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGVSTMCIGLGQGISTVFER 390          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 111/238 (46.64%), Postives = 144/238 (60.50%), Query Frame = -1
Query:  196 GVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLG-LDP--EKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 888
            G+TR++QD                GKFKDEIIP+         G ++   + V   D+ IRP+TT+  LA LKPAF  K GT TAG +SQ++DGA  +++M    A   G+  L V RS +  GVDP++MG GP  A   A+K AGL I DI+  E+NEAFA+Q +  +K L  LD   EKVN++GGA+ALGHP G +GAR   TLL+ MK+ G    FGV +MCIG G G A VFER
Sbjct:  163 GITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ--------GYDENGFLKVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLTIADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGVSTMCIGLGQGIATVFER 390          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.466e-46
Identity = 111/234 (47.44%), Postives = 143/234 (61.11%), Query Frame = -1
Query:  196 VTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGL---DPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFER 885
            ++RQ QD               +G F  EI+  N    +   GV KR     D+ IRP T ++ LA L+PAF   +GT TAG +S +SDGA A+L+M  S A   GL      RS + VG DPS+MG GP  A   A+K AGL++ DI LFE+NEAFA+Q + C+K LGL     +KVN+NGGA+ALGHPLG +GAR   TLL+ M+RR  D +FG+ +MCIG G G A VFER
Sbjct:  160 ISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAE---GVLKR--FDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR--DVQFGLATMCIGLGQGIATVFER 386          
The following BLAST results are available for this feature:
BLAST of CV885169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_ENT381.879e-4647.663-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
FADA_ECOLI1.879e-4648.093-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
THLA_STAAW2.454e-4641.03Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAS2.454e-4641.03Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAR4.185e-4640.60Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAB4.185e-4641.03Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
FADA_YERE84.185e-4647.013-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADA_PSEF54.185e-4646.813-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_PSE144.185e-4646.643-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_YERPS5.466e-4647.443-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885169 ID=CV885169; Name=CV885169; organism=Citrus sinensis; type=EST; length=897bp
GTTAGCAATGGCTTTATTATGTTTCAACTAATACCCATAGTACCCATCAT
CAACTAATTTTGAAATTCAACCAATCCATGCTTACATAAAACAGTGAGAT
GCAATTGCAAACAAATGCATCTACTTGGCATCCTTTGACAAGTGGGTGTG
AGTTGGAACCATTCGAGCATTGCATAGTTCGTCAACACAATCTCCTCTCT
CGAAAACTGCTGCAGCCCCCATGCCTGAGCCTATGCACATGGAGATCACT
CCAAATCGACAATCTTTGCCACGACGCTTCATCTCACTCAATAGAGTTGC
AACACAGCGTGCACCTGTCGCACCCAGAGGATGCCCAAGAGCCACTGCAC
CTCCATTAACATTGACTTTTTCAGGATCAAGCCCCAGTTTCTTAATACAA
TAAACATACTGGGATGCAAATGCCTCATTTATCTCAAACAAATTAATATC
ATCAATCTGAAGACCTGCAGACTTCACTGCAGCAGGTATTGCAACAGCTG
GGCCTATGCCCATGACAGAAGGATCTACACCAACAGCAGAAAAACTCCTG
AACACACCAAGAATTGGAAGACCCTTCTGCACAGCCAAACTTCTCTTCAT
AAGAAGAACTGCTCCAGCTCCATCACTGACCTGGCTAGCATTCCCAGCAG
TTGTCGTCCCATCCTTTTTAAATGCAGGCTTCAGCTTAGCCAGATCTGCA
ATTGTTGTGTTTGGTCGAATTCCATCATCCACAGAAATTGTGACACGCTT
CTCCACTCCAGTTTTTGGGTCCACAATCTTGGTATTCACTGGAATAATTT
CATCTTTAAACTTGCCAGATGCAGTTGCAGCAGCAGCACGCCTATGAGAT
TCAACGGCAGCCAGGTCTTGCTCTTGTCGTGTCACACCAAATCTCTG
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