CV885168

Overview
NameCV885168
Unique NameCV885168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:30..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.872e-33
Identity = 85/242 (35.12%), Postives = 126/242 (52.07%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFI-RQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV  G + +NLP P+    L +S  I  +R+Y  +  ++ AL+ TG+ +++      +P+LAS P+AA  W+ +NV  F P      I V NEVM S  Q+ I                 + G  IKVST     V   + PPS+G    +   +R IL FL     P   N YP+FAY+ +PR   L F  F P +  V+   G+ Y N+FDA VD++++AL   G   V++V++E+GWP
Sbjct:   26 IGVCNGVLGNNLPAPSDVVTLYRSKRIDAMRIYEPESKVLTALSGTGIAVLMDVGPA-LPSLASSPSAAAAWVKANVSSF-PGVSFRYIAVRNEVMDSAGQSTI-----LPAMRNVQRALAAAGSPIKVSTSVRFDVFNNTSPPSNGVLADKSGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFATFVPGSTTVNDN-GLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWP 259          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.872e-33
Identity = 85/245 (34.69%), Postives = 132/245 (53.88%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV YG + +NLP  +   +L +S +I++LRLY  +   + AL  + + +++G  + D+  ++S    A  W+  NV  F+P  KI  I VGNE+  ++   NL                   LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF      V  G+  +Y N+FDA +D+V++A++  G   V IVV+E+GWP
Sbjct:   27 IGVCYGMMGNNLPSHSEVIQLYKSRNIRRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSR-QYRNLFDAMLDSVYAAMDRTGGGSVGIVVSESGWP 269          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.872e-33
Identity = 87/246 (35.37%), Postives = 132/246 (53.66%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF-QPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +GV YG + +NLP  +   +L +S +I +LRLY  +   + AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++   +L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF  PNA   D     +Y N+FDA +D+V++A+   G   V IVV+E+GWP
Sbjct:    1 LGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNAVVQDGSR--QYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWP 243          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.363e-33
Identity = 77/243 (31.69%), Postives = 133/243 (54.73%), Query Frame = 2
Query:  131 GVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSF---IRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            GV YG++ +NLP P     L    +I+++R+YG  P +++AL  + + +++   + ++  LAS  + A +W+  N+  +    +   ++VGNEV    + +                    LG ++KVST      LA+S PPS GSF    R   + G+++FL ++ +P  +N Y +FAY ++P+  +L + LF+  +  V  G+ + Y N+FDA VDAV++AL   G   + IVV+E+GWP
Sbjct:   35 GVCYGRLGNNLPTPQEVVALYNQANIRRMRIYGPSPEVLEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRFRYVSVGNEV--KPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYALFRSPSVVVQDGS-LGYRNLFDASVDAVYAALEKAGGGSLNIVVSESGWP 274          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.310e-33
Identity = 87/245 (35.51%), Postives = 131/245 (53.47%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV YG + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S                 LG  IKVST   M+++  S PPS GSF R D    +  I+ FL+D  +P  +N YP+F+Y  +P   +L + LF      V  G+  +Y N+FDA +D+V++AL   G   V IVV+E+GWP
Sbjct:   35 IGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSR-QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWP 277          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.417e-32
Identity = 87/245 (35.51%), Postives = 130/245 (53.06%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV YG + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF      V  G+  +Y N+FDA +D+V++AL   G   V IVV+E+GWP
Sbjct:   35 IGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSR-QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWP 277          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.417e-32
Identity = 87/245 (35.51%), Postives = 130/245 (53.06%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV YG + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF      V  G+  +Y N+FDA +D+V++AL   G   V IVV+E+GWP
Sbjct:   36 IGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSR-QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWP 278          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.417e-32
Identity = 85/245 (34.69%), Postives = 130/245 (53.06%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +GV YG + +NLP  +   +L +S +I +LRLY  +   + AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++   +L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF      V  G+  +Y N+FDA +D+V++A+   G   V IVV+E GWP
Sbjct:   27 LGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNQGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSR-QYRNLFDAMLDSVYAAMERTGGGSVGIVVSECGWP 269          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31
Identity = 80/246 (32.52%), Postives = 124/246 (50.41%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQ---PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGVN G    ++P P     LL++  I+ +RLY ADP ++ ALANTG+ ++I   +  +  +    + A  W+  NV+  YPA+ I  ++VG+EV+ S   N                   +L   IKVST  + S++    PPS   F R     +  +L FL+   S   +N YP+  Y        L + LF+   PN   VD+ T ++Y N FDA VDA + A+  + F ++ ++V E+GWP
Sbjct:   32 IGVNIGTDLSDMPHPTQVVALLKAQEIRHIRLYNADPGLLIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATMITAVSVGSEVLTSL-SNAAPVLVSAIKNVHAALLSANLDKLIKVSTPLSTSLILDPFPPSQAFFNRSLNAVIVPLLSFLQSTNSYLMVNVYPYIDYMQSNGVIPLDYALFKPIPPNKEAVDANTLVRYSNAFDAMVDATYFAMAFLNFTNIPVLVTESGWP 276          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 91/242 (37.60%), Postives = 124/242 (51.24%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNA-MGFKDVEIVVAETGWP 850
            IGV YG   DNLPP +   +L QS  I  LR+Y  D   + AL+ T +G+++   + D+ +LASDP+AA  W+ SNV      S    I VGNEV   +  +++                  LGG IKVST    S + Q  PPS G+F  Q  M    Q+L+  G+P   N YP+F+Y  +P    L + LF      V  G+   Y N+FDA VD   SAL    G  +V +VV+E+GWP
Sbjct:   30 IGVCYGVNGDNLPPASDVVQLYQSNGINLLRIYFPDANPLNALSGTSIGLIMDVPNTDLASLASDPSAAAAWVQSNV-QASRRSACRYIAVGNEVSGGDTGSIL----PAMQNLNAALANAGLGGSIKVSTA-VQSDVTQGFPPSQGTF-SQGYMAPSRQYLQSTGAPLLSNVYPYFSYVGNPAQIDLKYALFTSPGTVVQDGSN-AYQNLFDALVDTFVSALEENAGAGNVPVVVSESGWP 263          
The following BLAST results are available for this feature:
BLAST of CV885168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13C_HORVU4.872e-3335.12Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E13B_SOLLC4.872e-3334.69Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E131_SOLTU4.872e-3335.37Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E13A_SOYBN6.363e-3331.69Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13B_NICPL8.310e-3335.51Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13F_TOBAC1.417e-3235.51Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC1.417e-3235.51Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E132_SOLTU1.417e-3234.69Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E132_ARATH1.200e-3132.52Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E13B_MAIZE2.673e-3137.60Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885168 ID=CV885168; Name=CV885168; organism=Citrus sinensis; type=EST; length=855bp
CAATTTCACTTTCTTCTCCATCTATTTCTCTCTGTCCATGGCCAAGGCCA
ACTCCAACTCCTCACTCTTCCTCTTCGTCTCTCTCCTCCTTTTTCAAGTT
CTTCACTTCTCAAGTTCGCAGTCATTCATCGGAGTGAACTACGGCCAAGT
AGCGGATAACCTGCCCCCGCCGGCGGCTACAGCGAAGCTTCTGCAATCGA
CTTCTATACAGAAATTGAGGCTCTACGGTGCAGATCCGGCCATCATCAAA
GCACTAGCAAACACTGGGGTTGGTATTGTAATTGGCGCTTCCAGTGGAGA
TATTCCGGCTCTCGCTTCTGATCCTAACGCCGCTACTCAGTGGATCAACT
CAAACGTGTTGCCTTTTTACCCCGCCAGCAAAATAATTCTCATCACCGTT
GGGAATGAGGTGATGATATCAAATGACCAAAATCTAATCAGTCAGCTTCT
TCCGGCAATGGCAAATATGCAAAACGCTCTTAACGCGGCCTCACTTGGTG
GGAAAATTAAGGTGTCAACGGTTCATGCGATGTCCGTGTTGGCACAATCC
GACCCGCCGTCCTCCGGGTCATTCATCCGCCAAGACACTATGAGAGGGAT
TTTGCAGTTTCTTAAAGACCACGGCTCCCCTTTTACCATCAACCCGTACC
CGTTTTTCGCTTATCAAAGTGACCCGAGACCCGAGACTCTTGCCTTCTGT
TTGTTTCAACCCAACGCGGGACGAGTTGACTCCGGGACCGGGATCAAATA
CATGAACATGTTCGACGCCCAGGTTGATGCTGTACATTCAGCCTTGAATG
CAATGGGGTTCAAGGATGTCGAGATTGTGGTTGCAGAGACAGGGTGGCCT
TACCG
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