CV885160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 6.392e-32 Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = -2 Query: 280 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVER 801 L +D YEG E G+++ VE + + FRA LDVGL +TTTG +VF DIPHS KRF G+ +S AEVHR +I+ GHV+ YM+ L E++ E ++ F +YIK G+ AD +EE+Y K HAAIR DP KR+N KK+T+ +R+ R+ ++ Sbjct: 110 LNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPT-PKKKTDFAGKTKRWNRKKMTFSQRRDRVKQK 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.424e-31 Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = -2 Query: 280 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVER 801 L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P KR+N K++ ++K R+ ++ Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP-VYEKKPKKEVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.424e-31 Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = -2 Query: 280 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVER 801 L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P KR+N K++ ++K R+ ++ Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP-VYEKKPKKEVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.429e-31 Identity = 73/175 (41.71%), Postives = 102/175 (58.29%), Query Frame = -2 Query: 280 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVER 801 L +D YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK I D +EE+YKK HAAIR +P KR N K++ ++K R+ ++ Sbjct: 110 LNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNP-VHEKKPKREVKKKRVNSTKMSLAQKKDRVAQK 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 5.411e-31 Identity = 72/175 (41.14%), Postives = 102/175 (58.29%), Query Frame = -2 Query: 280 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVER 801 L MD YEG VE G++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P KR+N K++ ++K R+ ++ Sbjct: 110 LNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENP-VYEKKPKREVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 5.411e-31 Identity = 72/175 (41.14%), Postives = 102/175 (58.29%), Query Frame = -2 Query: 280 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVER 801 L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ AEVHRK+I +VA YMR L+E++ + Y+ F +YIK + D +EE+YKK HAAIR +P KR+N K++ ++K R+ ++ Sbjct: 110 LNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLIEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENP-VYEKKPKKEVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.574e-30 Identity = 68/145 (46.90%), Postives = 93/145 (64.14%), Query Frame = -2 Query: 379 LKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQ---LDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADP 801 L L++D+++ G VEA GE Y VE +N RRPF+ALLDVG+ TTGNRVF +PHSEKRF G+S D + DA+ HR I+ HVA YM L E++PEKY+ F Y+K G+++++LE++Y K H IR +P Sbjct: 110 LTKLKLDSQFVGKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKRQFSAYLKLGLDSESLEDMYAKAHENIRKNP 254
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_MOUSE (60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.574e-30 Identity = 72/175 (41.14%), Postives = 101/175 (57.71%), Query Frame = -2 Query: 280 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVER 801 L MD YEG VE G +Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P KR+N K++ ++K R+ ++ Sbjct: 110 LNRFGMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENP-VYEKKPKREVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_ANOGA (60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30 Identity = 67/144 (46.53%), Postives = 92/144 (63.89%), Query Frame = -2 Query: 373 LKMLEMDAEYEGHVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQ 801 L+ L +D Y G + TGE+Y VEP E FR LDVGL +TTTG RVF +IPHS KRF G+S ++K +AE+HR +I+ HVA YMRTL E++ E ++ F +YI GI+AD++E +YK HA+IR P++ Sbjct: 110 LQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRIPPSR 253
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.581e-30 Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = -2 Query: 379 LKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQ---LDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADP 801 L L++D+++ G VEA GE Y VE +N RRPF+ALLDVG+ TTGNRVF +PHSEKRF G+S D + DA+ HR I+ HVA YM L E++PEKY+ F Y+K G+++++LE++Y H IR +P Sbjct: 110 LTKLKLDSQFVGKVEADGELYHVEEDDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGTYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKKQFSAYLKLGLDSESLEDMYASAHENIRKNP 254 The following BLAST results are available for this feature:
BLAST of CV885160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885160 ID=CV885160; Name=CV885160; organism=Citrus sinensis; type=EST; length=802bpback to top |