CV885160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_OIKDI (60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.333e-29 Identity = 72/174 (41.38%), Postives = 103/174 (59.20%), Query Frame = -2 Query: 283 LKMLEMDAEYEGHVEATGEDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVE 801 L+ +D+ YEG +E G+++ E + FR LD GL +T+TG R+F DIPHS KRF GF+ D K L+AE H+ +I+ GHV YM L E+ E Y+ F +IK GI ++N+EE+YKK HAAIRADP+ KR+N K++Y +R+AR+ + Sbjct: 120 LQKFGLDSMYEGQIEVDGDEFYEEADAAEKASFRCYLDTGLARTSTGARIFGVLKGCADAGIDIPHSPKRFPGFA-DGK-LNAEAHKDHIFGGHVGDYMEKLEEENEEAYKRQFSRFIKNGINSENIEEMYKKAHAAIRADPS-PKAKVEKTVDKKRWNRAKISYAQRRARVAQ 290
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.064e-29 Identity = 72/166 (43.37%), Postives = 94/166 (56.63%), Query Frame = -2 Query: 292 EYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPN---QXXXXXXXXXXXKRYNLKKLTYEERKAR 777 +YEG E GE E E+ RPF+ LDVGL +T+TG+RVF IPHS RF GF ++++LD E RKYIY GHVA YM L++D+ E+YQ F I GIE+D LE++Y + +A IR DP+ +Y +KLT EERK R Sbjct: 118 KYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERKER 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.925e-28 Identity = 71/166 (42.77%), Postives = 94/166 (56.63%), Query Frame = -2 Query: 292 EYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPN---QXXXXXXXXXXXKRYNLKKLTYEERKAR 777 +YEG E GE E E+ RPF+ LDVGL +T+TG+RVF IPHS RF GF ++++LD E RKYIY GHVA YM L++D+ E+YQ F I GIE+D LE++Y + +A IR DP+ ++ +KLT EERK R Sbjct: 118 KYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERKER 283
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.513e-28 Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = -2 Query: 376 LKMLEMDAEYEGHVEATGEDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLD----AEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPN 801 LK + E++G + +GE+Y +E +E RRPF+ +LDVG+V TT GNRVF IPHS KRF GF+K D EVHR IY HVA YMRTL E++PE+YQ+ F YI+ I+ D++E++Y++ IRA+P+ Sbjct: 110 LKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANPD 256
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 7.313e-28 Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = -2 Query: 268 LKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADP-----NQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKAL 801 L+ L +D Y+G E GE E E+ RPF+ LD+GL +TTTG RVF +PHSE RF G+ +++++D E+ R YI+ GHV+ YM L +D+ E++ F Y+ I+AD+LE++Y H AIRADP + K+Y KL+ EER AR+ ++ AL Sbjct: 110 LQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAAL 293
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.801e-26 Identity = 64/172 (37.21%), Postives = 100/172 (58.14%), Query Frame = -2 Query: 289 LKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARL 801 L L++ Y+G + G+ + V+P +++ RPF+A LDVGL +T+TG +VF +PH E RFAG++ +SK+L+AE R YI+ HVA+YM L ++ + Y+ F +YIK G+ ++E +Y H AIRA+P K NL K T +++KAR+ Sbjct: 110 LAKLKLADLYKGAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKKLNAETLRGYIFGKHVASYMTLLQTEDEDAYKKIFSQYIKNGVAPKDIETIYANAHKAIRANPAPAAKSTKSYKDIKSKNLSKRTLKQKKARV 281 The following BLAST results are available for this feature:
BLAST of CV885160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885160 ID=CV885160; Name=CV885160; organism=Citrus sinensis; type=EST; length=802bpback to top |