CV885159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.305e-64 Identity = 133/264 (50.38%), Postives = 175/264 (66.29%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQ---LDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKA 782 KTDY AR RL+ QDKNKY++PKYR VVR TNK + QI+S+++ GD V ASA + EL YG++VGLTNYAAAYCTGLLLARR+L L++D+++ G VEA GE Y VE +N RRPF+ALLDVG+ TTGNRVF +PHSEKRF G+S D + DA+ HR I+ HVA YM L E++PEKY+ F Y+K G+++++LE++Y H IR +P ++ K +H R K LT + R V+ KA Sbjct: 27 KTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEDDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGTYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKKQFSAYLKLGLDSESLEDMYASAHENIRKNP-VLPTKPKRKLKHVREGSKVLTSKGSYVRNVKITKA 289
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.952e-63 Identity = 121/255 (47.45%), Postives = 170/255 (66.67%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARL 764 KTDY+ R RLI QDKNKYN+PKYR V R TN D+ AQ++ + I GD VL +AYAHELPR+G++VGLTNYA+ Y TGLLLARR+L L++ Y+G + G+ + V+P +++ RPF+A LDVGL +T+TG +VF +PH E RFAG++ +SK+L+AE R YI+ HVA+YM L ++ + Y+ F +YIK G+ ++E +Y H AIRA+P K + K NL K T +++KAR+ Sbjct: 27 KTDYQQRHRLITQDKNKYNSPKYRLVARITNTDVIAQVVYSKIVGDFVLCAAYAHELPRFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYKGAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKKLNAETLRGYIFGKHVASYMTLLQTEDEDAYKKIFSQYIKNGVAPKDIETIYANAHKAIRANPAPAAKSTKSYKDIKSKNLSKRTLKQKKARV 281
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.952e-63 Identity = 131/257 (50.97%), Postives = 168/257 (65.37%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKP---PAEHKRYNLKKLTYEERKAR 761 KTDY AR RLI Q KNKYN PKYR VVRF+N+ +T QI+S+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + +YEG E GE E E+ RPF+ LDVGL +T+TG+RVF IPHS RF GF ++++LD E RKYIY GHVA YM L++D+ E+YQ F I GIE+D LE++Y + +A IR DP+ +KS K AE +Y +KLT EERK R Sbjct: 27 KTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERKER 283
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 7.416e-63 Identity = 130/257 (50.58%), Postives = 168/257 (65.37%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKP---PAEHKRYNLKKLTYEERKAR 761 KTDY AR RLI Q KNKYN PKYR VVRF+N+ +T QI+S+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L + + +YEG E GE E E+ RPF+ LDVGL +T+TG+RVF IPHS RF GF ++++LD E RKYIY GHVA YM L++D+ E+YQ F I GIE+D LE++Y + +A IR DP+ +KS K AE ++ +KLT EERK R Sbjct: 27 KTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERKER 283
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 8.200e-62 Identity = 129/275 (46.91%), Postives = 176/275 (64.00%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLD----AEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKK-----------PPAEHKRYNLKKLTYEERKARLVERLK 779 KTDY AR RLI QDKNKYN PKYRFVVR TN + Q++ A++ GD ++ SA + EL RYG++VGLTNY+AAY TGLLLARR+LK + E++G + +GE+Y +E +E RRPF+ +LDVG+V TT GNRVF IPHS KRF GF+K D EVHR IY HVA YMRTL E++PE+YQ+ F YI+ I+ D++E++Y++ IRA+P+ K E + A+ + KL E RK R++++++ Sbjct: 27 KTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANPDPVKKEAREVKRVRQGAMIKTAKSQYVRNVKLDKETRKERVLKKIQ 301
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.315e-43 Identity = 84/106 (79.25%), Postives = 92/106 (86.79%), Query Frame = 3 Query: 471 SKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 788 SKDSKQLDAEVHRKYIY GHVAAYM LMEDEPEKYQSHF YIK + DN+EE+YKKVHAAIR DP+ KKS+K+PP HKRYNLKKLTYEERKA+L+ERL ALN Sbjct: 2 SKDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALN 107
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL5_PIG (60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.508e-31 Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVE 296 KTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L M Y G VE Sbjct: 27 KTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQVE 124
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL18_METS3 (50S ribosomal protein L18P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl18p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.208e-16 Identity = 72/223 (32.29%), Postives = 101/223 (45.29%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIE-AD---NLEELYKKVHAA 659 KTDY AR++L++ DK+ R VVR +N T Q+I + GDI LASA + +L YG G +N +A Y TG L A+R L A G D A+LD+GL G++VF IP+ E D +++ E HVA Y +L +DE K F +Y++RG++ AD N EE K + A Sbjct: 18 KTDYAARMKLVDYDKS-------RLVVRLSNAHATVQVIDYAPEGDITLASAVSKQLANYGYLGGASNTSAVYLTGYLCAKRAL--------------AKGVD------------SAILDIGLKSAIKGSKVFAALKGAVDAGLDIPYGE----AVLPDESRINGE---------HVANYAESLDDDEIAKL---FSKYLERGLQPADLPKNFEETKKNIDEA 191
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL18_HYPBU (50S ribosomal protein L18P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl18p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.883e-16 Identity = 67/196 (34.18%), Postives = 91/196 (46.43%), Query Frame = 3 Query: 66 KYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKV 650 K RFVVR TN+ I Q+I A GD+ +A+A++ EL +YG G N AAY TGLL A R LK G Y A+LD+GL + T G RVF IPHSE ++ E +R I H+A Y L E PE Y+ F Y+ RG+ ++L + +++V Sbjct: 32 KPRFVVRRTNQYIWVQVIIAKPQGDVTVAAAHSRELVKKYGWLGGTKNTPAAYLTGLLAALRALK--------------AGITY------------AVLDIGLHRPTRGARVFAALKGALDAGLEIPHSE-----------EVLPEEYR--IRGEHIAKYAAMLKEQNPELYEKRFSLYLARGLNPEDLPQHFEEV 188
BLAST of CV885159 vs. ExPASy Swiss-Prot
Match: RL18_METJA (50S ribosomal protein L18P OS=Methanocaldococcus jannaschii GN=rpl18p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15 Identity = 61/220 (27.73%), Postives = 97/220 (44.09%), Query Frame = 3 Query: 3 KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAI 662 KTDYR R++L+ K R V R T AQI+ GD + SA++ EL + G + N +AY TG LL ++ L +G+ EA +LD+GL + T GN +F IPH E+ +++ E H+ AY L E + E+Y+ F +Y+++G+E + L E ++++ A I Sbjct: 18 KTDYRKRLKLLLSRKP-------RLVARRTLNHCIAQIVLYDEKGDKTVVSAHSRELIKLGYKGHTGNLPSAYLTGYLLGKKALA--------KGYTEA------------------VLDIGLHRATKGNAIFAILKGALDAGMEIPHGEE----ILPSEERIRGE---------HIKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191 The following BLAST results are available for this feature:
BLAST of CV885159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885159 ID=CV885159; Name=CV885159; organism=Citrus sinensis; type=EST; length=831bpback to top |