CV885158

Overview
NameCV885158
Unique NameCV885158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_PYRAB (Undecaprenyl pyrophosphate synthetase OS=Pyrococcus abyssi GN=uppS PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.028e-22
Identity = 71/222 (31.98%), Postives = 110/222 (49.55%), Query Frame = -1
Query:  263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928
            GH  G   L  +L++C EL ++ +++YAFS +NFKR++ E+                 D  + +YGVRV  IG   L+ + +R AAE+  RAT K    V+ + +AY    EIV  V++   + +       +         ED DE             L+K++Y+   PDPDI+IRT GE R+SNFLL+Q +   L+  +  +PE      +  I  FQ+
Sbjct:   59 GHLFGSKKLEEILEWCHELGIRILTVYAFSTENFKRSKEEVE-RLMQLFEQKFRELVTDKRVHEYGVRVNVIGRKELLPKSVRDAAEEAERATRKYNNYVLNVAIAYGGRSEIVDAVKD---IVRDVMDGKLR--------VEDIDEEL-----------LKKYLYVPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQK 257          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_METTH (Undecaprenyl pyrophosphate synthetase OS=Methanobacterium thermoautotrophicum GN=uppS PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.028e-22
Identity = 70/222 (31.53%), Postives = 111/222 (50.00%), Query Frame = -1
Query:  263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928
            GH+ G  TL  +L +CV+L ++ V+ YAFS +NFKR + E++                +  + K  VRV  +G L L+ E +R A E   ++T + +  ++ I + Y   +EIV   + T  + +  +     P        ED DE             + +++Y     DP ++IRTSGE RLS FLLWQSS   LY  ++LWPE+     + AI ++Q+
Sbjct:   50 GHKKGIETLEKVLDWCVDLGIEIVTAYAFSTENFKRPEKEVKGLMKLFRENFEAIASNEK-IHKNRVRVRAVGKLELLPEDVRRAIEIAEKSTEQYSDRLVNIAIGYDGRQEIV---DATRKIAEDVKAGLIDP--------EDIDEDM-----------INRNLYTAGLEDPHLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRAIRSYQQ 248          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_PYRKO (Undecaprenyl pyrophosphate synthetase OS=Pyrococcus kodakaraensis GN=uppS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.459e-22
Identity = 70/222 (31.53%), Postives = 110/222 (49.55%), Query Frame = -1
Query:  263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928
            GH  G   L  +L++C EL+++ +++YAFS +NFKR++ E+                +D  + +YG+RV  +G   ++ E +R AAE+  RAT K +   + I LAY    EI   V E   + +       KP        ED DE             +++++Y    PDPDI+IRT GE R+SNFLL+Q +   L+  +  +PE      +  I  FQ+
Sbjct:   59 GHLFGSKKLEEILEWCRELNIRTLTVYAFSTENFKRSKEEVE-ALMNLFEEKFKELVQDERVHRYGIRVNVLGRKDMLPENVRKAAEEAERATRKYSNYNLNIALAYGGRSEIADAVRE---IVRDVLEGKIKP--------EDIDEEA-----------IKRYLYYPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQK 257          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_LEPIN (Undecaprenyl pyrophosphate synthetase OS=Leptospira interrogans GN=uppS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.459e-22
Identity = 67/214 (31.31%), Postives = 101/214 (47.20%), Query Frame = -1
Query:  287 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLI 928
            GHR G   +  L+   +EL +K +S+YAFS +N+KR   EIR                   + K G+R+   G+   ++  +    +  +  T KN  + +  CL Y S +E++   +E  L  K+++    KP                KEK      + EK +Y  + P  D+LIRT+GE RLSNFLLWQS+   LY  + LWPE     L+
Sbjct:   33 GHREGAQAIDRLMDASLELGLKNISLYAFSTENWKRPVTEIRSIFSLLIEFIETRLDT---IHKRGIRILHSGSRKKLTRGVLDKIDFAVDKTQKNKNLTVNFCLNYGSRDELLRAAQELFLERKRSKVALEKPL---------------KEK------EFEKFLYTSILPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPEFDKNSLV 222          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_LEPIC (Undecaprenyl pyrophosphate synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=uppS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.459e-22
Identity = 67/214 (31.31%), Postives = 101/214 (47.20%), Query Frame = -1
Query:  287 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLI 928
            GHR G   +  L+   +EL +K +S+YAFS +N+KR   EIR                   + K G+R+   G+   ++  +    +  +  T KN  + +  CL Y S +E++   +E  L  K+++    KP                KEK      + EK +Y  + P  D+LIRT+GE RLSNFLLWQS+   LY  + LWPE     L+
Sbjct:   33 GHREGAQAIDRLMDASLELGLKNISLYAFSTENWKRPVTEIRSIFSLLIEFIETRLDT---IHKRGIRILHSGSRKKLTRGVLDKIDFAVDKTQKNKNLTVNFCLNYGSRDELLRAAQELFLERKRSKVALEKPL---------------KEK------EFEKFLYTSILPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPEFDKNSLV 222          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_CLOPE (Undecaprenyl pyrophosphate synthetase OS=Clostridium perfringens GN=uppS PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.717e-21
Identity = 70/221 (31.67%), Postives = 104/221 (47.06%), Query Frame = -1
Query:  266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 928
            GHRAG  T+ +++K C +L VKY+++YAFS +N+KR ++E+                E   L + GVRV  IG+L    E  + A    M  T  NT +V+ + L Y    EIV  ++      K  +          +D+ ED                   ++Y    PDPD++IR SGE RLSNFLLWQ +    +  +  WP+     L  AI ++Q
Sbjct:   48 GHRAGVKTIKTIVKECDKLGVKYLTLYAFSTENWKRPEDEVNALMKLVVEFIKNEIDE---LHQNGVRVQTIGDLSRFPEEPKKAILWAMEKTKDNTGVVLSLALNYGGRNEIVRGIKSVIEDVKAGKISI-------DDINEDM---------------FNDYLYTKGMPDPDLIIRPSGEQRLSNFLLWQCAYSEFWYSQINWPDFNGEDLRKAIFDYQ 243          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_BACHK (Undecaprenyl pyrophosphate synthetase OS=Bacillus thuringiensis subsp. konkukian GN=uppS PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.242e-21
Identity = 67/222 (30.18%), Postives = 109/222 (49.10%), Query Frame = -1
Query:  266 AGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 931
            AGH  G   +  + K+  +L+VK +++YAFS +N+KR + E+ Y              E   L +  V+V  IG    +    R A EK M  T +NT +++   L Y S +EIV  V+                      + +D++E K + ++  + + L  ++     PDP++LIRTSGE R+SNF+LWQ +    +  +  WP+    HL+ AI +FQ
Sbjct:   53 AGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALNYGSRDEIVSAVQH---------------------MMKDSEEGKVRVEDVSEEM-LSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQ 249          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_BACC1 (Undecaprenyl pyrophosphate synthetase OS=Bacillus cereus (strain ATCC 10987) GN=uppS PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.242e-21
Identity = 69/222 (31.08%), Postives = 102/222 (45.95%), Query Frame = -1
Query:  266 AGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 931
            AGH  G   +  + K+  +L+VK +++YAFS +N+KR + E+ Y              E   L +  V+V  IG    +    R A EK M  T +NT +++   L Y S +EIV  V+              K R       ED  E             L  ++     PDP++LIRTSGE R+SNF+LWQ +    +  +  WP+    HL+ AI +FQ
Sbjct:   53 AGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALNYGSRDEIVSAVQHM-----------MKDREEGKVRVEDVSEEM-----------LSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQ 249          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_BACAN (Undecaprenyl pyrophosphate synthetase OS=Bacillus anthracis GN=uppS PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.242e-21
Identity = 67/222 (30.18%), Postives = 109/222 (49.10%), Query Frame = -1
Query:  266 AGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 931
            AGH  G   +  + K+  +L+VK +++YAFS +N+KR + E+ Y              E   L +  V+V  IG    +    R A EK M  T +NT +++   L Y S +EIV  V+                      + +D++E K + ++  + + L  ++     PDP++LIRTSGE R+SNF+LWQ +    +  +  WP+    HL+ AI +FQ
Sbjct:   53 AGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRPKKEVDYLMQLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLILNFALNYGSRDEIVSAVQH---------------------MMKDSEEGKVRVEDVSEEM-LSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQ 249          
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: YE54_SCHPO (Uncharacterized protein C4D7.04c OS=Schizosaccharomyces pombe GN=SPAC4D7.04c PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.928e-21
Identity = 65/222 (29.28%), Postives = 104/222 (46.85%), Query Frame = -1
Query:  266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQ-SSNCMLYAPEALWPEIGLRHLIWAILNFQ 928
            GH +GF  L SLLK C++L VK VS + FSI+NFKR++ E+                    + +YG+R+  +G+L  +   +   A K +  T  NT+  + +C  Y+S  EI  +V+    + K  +     P     D+ ED  E     K+++ L               D+LIRTSG  RLS+F+LWQ   N  +   +  WP+  +      ++ +Q
Sbjct:   59 GHSSGFEALKSLLKVCLKLGVKEVSAFTFSIENFKRSKYEVDMLMEIAKNSLTQITAHGDLVDQYGIRIRIVGDLSRLQPDVLETALKAVEITKHNTKATLNVCFPYTSRHEIATSVQS---IVKMAEDGTITP----EDIDEDIFEKNLLIKDSLPL---------------DLLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFSIWKFFPMLIQYQ 258          
The following BLAST results are available for this feature:
BLAST of CV885158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
UPPS_PYRAB2.028e-2231.98Undecaprenyl pyrophosphate synthetase OS=Pyrococcu... [more]
UPPS_METTH2.028e-2231.53Undecaprenyl pyrophosphate synthetase OS=Methanoba... [more]
UPPS_PYRKO3.459e-2231.53Undecaprenyl pyrophosphate synthetase OS=Pyrococcu... [more]
UPPS_LEPIN3.459e-2231.31Undecaprenyl pyrophosphate synthetase OS=Leptospir... [more]
UPPS_LEPIC3.459e-2231.31Undecaprenyl pyrophosphate synthetase OS=Leptospir... [more]
UPPS_CLOPE1.717e-2131.67Undecaprenyl pyrophosphate synthetase OS=Clostridi... [more]
UPPS_BACHK2.242e-2130.18Undecaprenyl pyrophosphate synthetase OS=Bacillus ... [more]
UPPS_BACC12.242e-2131.08Undecaprenyl pyrophosphate synthetase OS=Bacillus ... [more]
UPPS_BACAN2.242e-2130.18Undecaprenyl pyrophosphate synthetase OS=Bacillus ... [more]
YE54_SCHPO2.928e-2129.28Uncharacterized protein C4D7.04c OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885158 ID=CV885158; Name=CV885158; organism=Citrus sinensis; type=EST; length=943bp
GTAATACATTCCATATGGTTTTATTTTGAAAAGTCACCTTTCATGGGGTT
TGTGGTAGCATATTATCCCATTAAGAATCTAACCGACCACGCAAACATAA
AGGACAGCATTTGCAGATGCTTATCTGTTTGAGCTTCCACCAAAACTCAC
CATGATGTGAACCTAGGAGCAGAAATCACACGATGTTGTTCAGATAGTAT
ATGGTTCTAGGGGGCAAAGGATACTAGAGCTGCTTCTTCTTCTTTTCCAA
ATAGGCGTGGTGTCGTTGAAAGTTCAAGATAGCCCAGATCAAGTGCCGCA
AACCAATTTCTGGCCACAGTGCTTCTGGGGCATACAACATGCAGTTGCTG
CTCTGCCAAAGAAGGAAATTGCTCAGGCGGTTCTCGCCAGAAGTTCGGAT
GAGGATGTCAGGATCTGGATATACACCCATGTACATATGCTTCTCAAGAT
CTACAAGCTTAATAGTATTTTTCTCCTTATTTTTATGCTCATCAGCATCT
TCAGTAACATCATTTTGAGGATTACGTGGCTTAAATGCTTGGGGCTGGGT
TTTCTTTGTAACGAGGCAGGTTTCTTCAACAGTATGGACGATCTCCTCAG
TGGAACTATATGCCAGGCAGATTAGAATCACGATCCTGGTGTTTTTGGAA
GTAGCTCTCATCACTTTTTCAGCTGCAACCCTAATAGGCTCACTCACTAG
TCCTAAGTTGCCTATGAAACATACTCTGACACCATATTTACTAAGAAAAC
CATCTTCCCGAAGCAGCAACTCCATCTTTTCCAACATTAGATCCATCAAA
TATCGAATCTCGTTTTGCGTTCGTTTGAAATTATCTATACTGAAGGCGTA
GATAGAGACATACTTCACACTCAATTCGACGCAGTACTTCAACAGGGACA
TGAGGGTCAAAAATCCAGCCCTGTGACCAGCCCCCTCTCCTGC
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