CV885158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_SULSO (Undecaprenyl pyrophosphate synthetase OS=Sulfolobus solfataricus GN=uppS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 60/221 (27.15%), Postives = 97/221 (43.89%), Query Frame = -1 Query: 263 GFLTLMSLLKYCVELSVKYVSIYAFSIDNF-KRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE--KNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 916 G+ L +L + +EL +K ++++ S +N KR QNE+ D + KY V+V IG L + + + +V+ TS + + + + Y +EI+ V D+++N + K+ I K+ Y D D++IRTSGE R+SNFLLW + L+ EA WPE L AI +FQ+ Sbjct: 60 GYKKLKEVLIWLLELGIKNITVFVLSTENCDKRKQNELSIITTYIKRGIQDLLE-DPIVDKYEVKVSAIGKLDKLPKDLIDYLNRVVEKTSNYDKRKLTLAICYGGRQEILDAVVRLL------------------------DDYRNGKIVKSEINEETFRKYFYDSELQDIDLVIRTSGEVRISNFLLWHVAYSELFFCEAYWPEFRKIDLWRAIRSFQK 255
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_CAUCR (Undecaprenyl pyrophosphate synthetase OS=Caulobacter crescentus GN=uppS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 56/221 (25.34%), Postives = 92/221 (41.63%), Query Frame = -1 Query: 266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 928 GHRAG L ++ +V ++++ FS +N+ R E+ L+K GVRV IG +S I E+ R T++N+ V+ + Y +I ++ + +A +D+ E E+ + P PD+++RTSGE R+SNFLLW + L + LWP+ G L AI ++ Sbjct: 46 GHRAGVNALKRTVEGAQSQNVGVLTVFGFSTENWSRPPQEVSELMGLLKAYVESDLER---LAKAGVRVRIIGRRTGLSPDIAEVIERAERRTAQNSEFVLQVAFNYGGQADITDAARAFAERVERGEAKA-------SDLNEKT---------------FEQFLSTASAPPPDLIVRTSGERRISNFLLWDCAYAELVFQDVLWPDYGPEALAAAIAEYR 241
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_BIFLO (Undecaprenyl pyrophosphate synthetase OS=Bifidobacterium longum GN=uppS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 57/223 (25.56%), Postives = 99/223 (44.39%), Query Frame = -1 Query: 260 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRH 928 GH+A + + +E V+Y+S+Y FS +N+KR+ E+R+ + + ++GVRV + G + + + E T N I ++ C+ Y EI + C + E D + ++ T K++ H+Y PD D++IRTSGE R SNFL W+++ L L+P+ G R ++W ++ H Sbjct: 59 GHQAAEPVVFDTIAGAIEAGVRYLSLYTFSTENWKRSPQEVRFLMGFSREIIHRRVEQ---MDEWGVRVRWSGRRPKLWKSVIDELEAAEERTKNNKVIDVVFCINYGGRAEIA----DACAAIAR----------------EVRDGKISGDRVTEKMI--ADHLYNPDIPDCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCG-RDVLWRSIDHYIH 255
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_PHOPR (Undecaprenyl pyrophosphate synthetase OS=Photobacterium profundum GN=uppS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.935e-13 Identity = 57/207 (27.54%), Postives = 91/207 (43.96%), Query Frame = -1 Query: 308 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 928 GH+AG + + L VK ++++AFS +N++R ++E+ L K +++ IG+ SE ++ T+ NT +V+ I Y +I+ TKK Q + +D+TED L M PD D++IRTSGE R+SNF+LWQ++ LY E WP+ Sbjct: 40 GHKAGVEAVRKSVTTANRLGVKVLTLFAFSSENWRRPEDEVSLLMELFMTVLTREVKR---LHKNNIQLRIIGDKSGFSERLQRKIATSEALTANNTGLVLNIAANYGGQWDILQA-------TKKLAVQIAEQGLTASDITEDM---------------LSAGMSTADLPDVDLMIRTSGECRISNFMLWQAAYAELYFTEQHWPD 221
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_WOLSU (Undecaprenyl pyrophosphate synthetase OS=Wolinella succinogenes GN=uppS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13 Identity = 54/222 (24.32%), Postives = 95/222 (42.79%), Query Frame = -1 Query: 263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928 GH G T+ + +C + + ++++YAFS +N+KR + E+ + K +R IG+L S + E + + ++ + + ++ L Y S +EI+ + K +V+E+ +L + + PD D+L+RT G+ RLSN+LLWQSS L+ LWP+ L I F+R Sbjct: 31 GHEKGAETIREITMFCSKSDISFLTLYAFSTENWKRPKTEVDFLMRLLSDYLKKEAEV---YLKNNIRFKAIGDLSRFSSRLLDEIETLTQKSASCSGLTQVLALNYGSKDEIIRATQ--------------KMIEAGVEVSEE---------------NLSRFLDTAFAPDVDMLVRTGGDYRLSNYLLWQSSYAELFFTPTLWPDFTAGELAIQIEEFKR 220
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_RALSO (Undecaprenyl pyrophosphate synthetase OS=Ralstonia solanacearum GN=uppS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13 Identity = 51/208 (24.52%), Postives = 90/208 (43.27%), Query Frame = -1 Query: 308 AGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 931 AGH G + + ++ V+Y++++AFS +N++R EI + + L+ G+R+ +G+L S I++ + T+ N + + I Y +I+ + P+A +TE+A L +M + +PD+ IRT GE R+SNF+LWQ + LY E WP+ Sbjct: 39 AGHSRGLDAVRAAVQAADHRGVRYLTLFAFSSENWRRPAEEISFLMKLFMTALRREVSK---LNDSGIRLRVVGDLSAFSPRIQLMIREAEAKTATNPGLTVTIAANYGGRWDILQAMRALVADQPDIAPEA---------ITEEA---------------LSPYMALAYASEPDLFIRTGGEQRISNFMLWQLAYSELYFTERYWPD 219
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_RHOBA (Undecaprenyl pyrophosphate synthetase OS=Rhodopirellula baltica GN=uppS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.115e-12 Identity = 51/207 (24.64%), Postives = 91/207 (43.96%), Query Frame = -1 Query: 308 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 928 GHR G T+ ++ + EL + +++Y S +N+KR Q E+ + + +R+ FIG +S+ + K + NT +++ + Y +E+ T+ T+ A + R+ + + E + ++ +T L PD D++IRT G+ R+SN+LLWQ S LY WPE Sbjct: 36 GHRRGVTTVRTVTEMASELKLDALTLYCLSSENWKRPQAELDFLMHLLQQYLVEERRT---IRDQNMRLRFIGRRDRLSDEVLKEIAKTQAVSENNTGTELVLAVDYGGRDEL----------TRMTRQLAQQVRDGERSIDEITESLVDESLDTAGL------------PDVDLMIRTGGDIRISNYLLWQISYAELYFTPKCWPE 217
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_PSESM (Undecaprenyl pyrophosphate synthetase OS=Pseudomonas syringae pv. tomato GN=uppS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.115e-12 Identity = 52/208 (25.00%), Postives = 92/208 (44.23%), Query Frame = -1 Query: 308 AGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 931 AGH+AG + ++++ C E V+ ++++AFS +N++R E+ L++ + + IG+ ++ A + TS N+R V+ I Y +I + + ++ Q +P D+T L+ + G P PD+ IRT GE+R+SNFLLWQ + LY + WP+ Sbjct: 36 AGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSENWQRPAEEVGALMELFFTALRRETKR---LNENDISLRIIGDRSRFHPELQAAMREAEVRTSGNSRFVLQIAANYGGQWDIAQAAQR---LAREVQAGHLQPE----DITPQL---------------LQTCLATGDLPLPDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPD 218
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_ACIAD (Undecaprenyl pyrophosphate synthetase OS=Acinetobacter sp. (strain ADP1) GN=uppS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.457e-12 Identity = 52/228 (22.81%), Postives = 95/228 (41.67%), Query Frame = -1 Query: 269 EGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMY-----MGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNF 937 +G GHR G +L ++++C V+ ++++AFS +N+ R E+ + K+ + + FIG+ +SE + T+ T + + I ++Y +I ++ K+ + + ++ H++ + P D+LIRT G+ RLSNFLLWQ++ LY E LWPE + A+ F Sbjct: 31 KGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWNRPAFEVDLLMKLLEEAIHEQLPR---MRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTSMTLTIAISYGGMWDITDAAKQIA---------------------------KDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVF 228
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_HAEDU (Undecaprenyl pyrophosphate synthetase OS=Haemophilus ducreyi GN=uppS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12 Identity = 58/222 (26.13%), Postives = 97/222 (43.69%), Query Frame = -1 Query: 263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928 GH+ G + + + + + +K +++YAFS +N+ R E+ + L K+ +R+ +G+ S+ ++ + T+ NTR+ + I Y S +I TKK + + D+T EK LV E+ P D+LIRTSGE R+SNFLLWQ + L+ + LWP+ AI +Q+ Sbjct: 37 GHQNGVNAVRAAVHFAAKYGIKVLTLYAFSSENWNRPATEVSALMSLFIQALNTEVSK---LHKHNIRLNILGDKTRFSDSLQKRIIESETLTAHNTRLTLNIAANYGSHWDITEA-------TKKLAEKVKLGKISVTDITP--------EKVQRALVTAEQ-------PPVDLLIRTSGEQRISNFLLWQIAYAELFFSDVLWPDFDETSFSEAIYAYQQ 233 The following BLAST results are available for this feature:
BLAST of CV885158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885158 ID=CV885158; Name=CV885158; organism=Citrus sinensis; type=EST; length=943bpback to top |