CV885158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS1_CORGL (Undecaprenyl pyrophosphate synthetase 1 OS=Corynebacterium glutamicum GN=uppS1 PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.042e-18 Identity = 57/224 (25.45%), Postives = 103/224 (45.98%), Query Frame = -1 Query: 263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEK--NTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928 GHR G + ++++C ++ V V++Y S++N R+ E++ + RV +G+L L+ +P+ K AT NT I + + + Y +EIV V++ + K DE + ++ ++K+ + H+Y PDPD++IRTSGE RLS F+LWQS+ ++ + WP + AI ++ + Sbjct: 20 GHRVGAKKIGEMVRWCDDVDVNLVTVYLLSMENLGRSSEELQLLFDIIADVADELARPET-----NCRVRLVGHLDLLPDPVACRLRKAEEATVNNTGIAVNMAVGYGGRQEIVDAVQKLLTIGK--------------------DEGLSVDELIESVKVDAISTHLYTSGQPDPDLVIRTSGEQRLSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRAIRDYSQ 218
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_NEIMA (Undecaprenyl pyrophosphate synthetase OS=Neisseria meningitidis serogroup A GN=uppS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.360e-18 Identity = 58/222 (26.13%), Postives = 107/222 (48.20%), Query Frame = -1 Query: 263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928 GH+ G L +++K+C +L V+Y++++AFS +N++R ++E+ + L + +R+ +G+ + I E+ T+ NT + + I Y +I+ + L+ + +++TED L K++ +G P+PD+ IRT GE R+SNFLLWQ + LY + LWP+ + L A+ +FQ+ Sbjct: 39 GHKRGLDALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRR---LHENNMRLKILGSRERFNRQILKGIEEAEALTANNTGLTLSIAADYGGRWDILQAANK--LIAEGV-----------SEITEDT---------------LAKYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQK 229
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_THEMA (Undecaprenyl pyrophosphate synthetase OS=Thermotoga maritima GN=uppS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.777e-18 Identity = 62/222 (27.93%), Postives = 106/222 (47.75%), Query Frame = -1 Query: 263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928 GH+ G L + +K+ +EL +KY++ ++FS +N+KR + E+ + L + VRV +G + E + ++V T + R+ ++I Y EI+ VE + K + ++TE+ +++Y+ PDPD++IRTSGE RLSNFLLWQS+ LY + LWP+ R + AI ++ + Sbjct: 28 GHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENWKRPKEEVEFLMDLFVQMIDREME---LLRRERVRVRILGRKEGLPEKVLKKWQEVEEKTKEFDRMTLIIAFNYGGRREILDAVE---FILKDVS------HGKKIELTEET---------------FRQYLYLPDVPDPDLIIRTSGEMRLSNFLLWQSAYSELYFFKKLWPDFTKRDFLRAIESYSK 222
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_SYNY3 (Undecaprenyl pyrophosphate synthetase OS=Synechocystis sp. (strain PCC 6803) GN=uppS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.777e-18 Identity = 61/224 (27.23%), Postives = 99/224 (44.20%), Query Frame = -1 Query: 257 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHH 928 GH+ G +L +LL+ C + + ++ YAFS +N+ R E+ + E + VR+ F+GNL + ++ + M T NT I + Y +EIVH + + ++ Q P V +EK++Y PD+LIRTSGE R+SNFLLWQ + +Y LWP+ + A+ ++Q+ H Sbjct: 45 GHQRGVDSLKNLLRCCDDWGIAALTAYAFSTENWGRPLEEVEFLMTLFERVLRRELKE---MMAENVRIRFVGNLTSLPRSLQDEIARSMEDTKNNTGIRFTVATNYGGRQEIVHVCQA---IAREVQSGKLDPETIDEGV-------------------VEKYLYTEGLSHPDLLIRTSGELRISNFLLWQMAYAEIYVTSTLWPDFDRQAFHLALRDYQQRH 243
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_PORGI (Undecaprenyl pyrophosphate synthetase OS=Porphyromonas gingivalis GN=uppS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.320e-18 Identity = 57/207 (27.54%), Postives = 96/207 (46.38%), Query Frame = -1 Query: 308 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 928 GH AG L L+ V+Y++ Y FS +N+ R + E+R + L +R+ IG+ + E +R + EK +R T+ NT + +++ L+YSS E+ + + +K + + +P + D+ D H+ PDPD+ IRT GE R+SNFL+WQ + L+ + LWP+ Sbjct: 39 GHAAGVDALRVALRAAAGCGVEYLTAYTFSTENWNRPEEEVRALMGLFVTAIMNEMLD---LMTNNIRLLAIGDFSRLPEDVRESLEKGIRETAGNTGLTLVLALSYSSRWEMTDVIRR---LARKVRDGSVEPEDINVDLVSD-------------------HLSTAGIPDPDLFIRTGGEKRISNFLMWQMAYTELFFTDTLWPD 220
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_BACTN (Undecaprenyl pyrophosphate synthetase OS=Bacteroides thetaiotaomicron GN=uppS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.320e-18 Identity = 61/222 (27.48%), Postives = 103/222 (46.40%), Query Frame = -1 Query: 263 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 928 GH+AG T+ +++ L VKY+++Y FS +N+ R Q E+ E+ L K +R IG++ + ++ + + T+ NT +++ L+YSS E+ V + + K + +P+ + DE+ + H+ PDPD+LIRT GE RLSN+LLWQ + LY + WP+ AI +Q+ Sbjct: 37 GHQAGAETVHKIIEDAARLGVKYLTLYTFSTENWNRPQEEVA-----ALMNLLVDSIEEETLMKNNIRFRIIGDIKKLPAEVQEGLSRCIEHTANNTGTCLVLALSYSSRWEMTEAVRQIATLAKTGEI------SPE----QITDEY------------ITAHLTTNFMPDPDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFCKAIYEYQQ 231
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_CHLTR (Undecaprenyl pyrophosphate synthetase OS=Chlamydia trachomatis GN=uppS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.030e-18 Identity = 61/225 (27.11%), Postives = 109/225 (48.44%), Query Frame = -1 Query: 263 AGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETC--LVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 931 +GHR G ++ ++ + L V+ ++++AFS +NF R+++E+ FL +R+ IG+L + + ++ E+ AT+ +R+ ++ + Y S +E+V +E L +KK ND++E+ + ++ PDPD+LIRT GE R+SNFLLWQ + LY + LWP+ L+ AI +Q+ Sbjct: 49 SGHRQGADSIPQIVDTALHLGVEALTLFAFSTENFSRSKSEVAELFSLFNSQLRSKL---SFLHDREIRLRCIGDLSKLPQELQNNIEQASSATAHYSRMELIFAINYGSKDELVRAFKELHQDLASKKISV---------NDISEEL---------------ISSYLDTSGLPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFTANDLLEAIKTYQQ 246
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_ARCFU (Undecaprenyl pyrophosphate synthetase OS=Archaeoglobus fulgidus GN=uppS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.030e-18 Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = -1 Query: 266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMY-MGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 928 GH G +L++C +L VK +++YAFS +NF+R++ E + +D + +RV +G L+ E +R ++V T K+ R + + +AY +EI+ V + +K + +P E+ DE LE+H+Y G Y D++IRT GE RLSNFL WQ++N + Y + WPE L+ AI +Q Sbjct: 45 GHFFGSKKAEEVLEWCWDLGVKMLTLYAFSTENFRRSEKE-KKNIFQLLESELRRLLKDRRTYERELRVKVVGKRELLPENLRETIKEVEERTKKHRRHYLNVAVAYGGRQEIIDAVRA---ILRKVRKGEVRP--------EEIDEKM-----------LEEHLYGEGRYSKVDLIIRTGGEQRLSNFLPWQAANSVAYFCDVYWPEFRKIDLLRAIRAWQ 243
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_TREDE (Undecaprenyl pyrophosphate synthetase OS=Treponema denticola GN=uppS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.169e-18 Identity = 62/224 (27.68%), Postives = 105/224 (46.88%), Query Frame = -1 Query: 257 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHH 928 GH+ G T+ + K +L + Y+++Y FS +N+KRT+ E+ + F + +R+ IGNL + + I+ V TS T I++ + Y + +EI+ +++ + D N+E ++KL G P D+LIRT GE RLSNFLLWQS+ LY + LWP+ + +L AI ++++ + Sbjct: 29 GHKEGLNTVKRITKAVSDLGIPYITLYIFSTENWKRTEAEVGFLMGLIKQHLKAELK---FYADNNIRIEHIGNLSGLPQDIQDEINSVRDKTSAYTGTAIVLGINYGAHDEILRAIKK---------------------LNSDELASINEESFSLKLDT-------GKIPPVDLLIRTGGEKRLSNFLLWQSAYAELYFTDTLWPDWTVENLYEAIEDYKKRN 221
BLAST of CV885158 vs. ExPASy Swiss-Prot
Match: UPPS_PROMP (Undecaprenyl pyrophosphate synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=uppS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.169e-18 Identity = 58/221 (26.24%), Postives = 103/221 (46.61%), Query Frame = -1 Query: 266 GHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXEDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQ 928 GH G L ++K + K +++YAFS +N+ R NE+ + E + + +++ FIG+L + +++ + T+ N + + IC+ Y +EIV +E + K+ KP +D+ E + K ++ DP++LIRTSGE R+SNFLLWQ + +Y + LWP+ + AI+++Q Sbjct: 48 GHNKGVSVLKEIIKASKNIDCKVLTVYAFSTENWIRPSNEVDFLINLFEKVLKKEISE---IHQESIKIKFIGDLSPLPNSLKLLIKSSEALTNNNKKFTLNICVNYGGRQEIVKAAKEIAI---KSSSGKIKP----SDIDEQLFNSELLTKGSM---------------DPELLIRTSGEKRISNFLLWQLAYSEIYVTDVLWPDFTESEFLKAIIDYQ 243 The following BLAST results are available for this feature:
BLAST of CV885158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885158 ID=CV885158; Name=CV885158; organism=Citrus sinensis; type=EST; length=943bpback to top |