CV885157
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_SALTI (Undecaprenyl pyrophosphate synthetase OS=Salmonella typhi GN=uppS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.313e-15 Identity = 60/230 (26.09%), Postives = 102/230 (44.35%), Query Frame = 1 Query: 85 HIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 774 H+A I+DGN R+AKK GH+AG ++ + + + +++YAFS +N+ R E+ L ++ VR+ IG++ + ++ K T+ NT + + I Y +IV V + + + Q +P + DE + L + + M D++IRT GE+R+SNFLLWQ + LY + LWP+ Sbjct: 19 HVAIIMDGNGRWAKKQGKI-RAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKS---LHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLTLNIAANYGGRWDIVQGVRQ---LAELVQAGVLRP--------DQIDEER-----------LGQQICMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPD 222
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_BUCAI (Undecaprenyl pyrophosphate synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=uppS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.313e-15 Identity = 62/245 (25.31%), Postives = 108/245 (44.08%), Query Frame = 1 Query: 79 PNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNF 813 P H+A I+DGN R+A + GH+ GF + +K+ + ++K +++YAFS +N+ R EI+ L K+ +R IG++ + ++ + + T NT +++ I Y +I+ +V++ N V + +NTI +++ D++IRT GE R+SNFLLWQ + LY + LWP+ AI +F Sbjct: 18 PCHVAIIMDGNGRWATRQGKI-RIMGHKEGFRAVKEAIKFSIANNLKILTLYAFSSENWNRPLFEIKALMELFLFALDTEIKN---LKKHNIRFKVIGDITCFDKKLQNSIHYAEQITFDNTGLILNIAANYGGRWDIIESVKKII-----------------NRVQRGILDVNKIHENTIS-----QYLSTSELLPVDLVIRTGGEKRISNFLLWQIAYSELYFTDVLWPDFNCHIFQHAIDSF 236
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_WIGBR (Undecaprenyl pyrophosphate synthetase OS=Wigglesworthia glossinidia brevipalpis GN=uppS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.112e-14 Identity = 62/241 (25.73%), Postives = 112/241 (46.47%), Query Frame = 1 Query: 79 PNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWA 801 P HIA I+DGN R+AK GH+AG + +K+ + + +++YAFS +N+KR E+ D F K +R+ IG++ + ++ +K + T KN + + I Y +I+ V++ + K+ + P + E N + + + + + + D++IRT GE+R+SNFLLWQ + L+ + LWP+ H+I++ Sbjct: 12 PRHIAIIMDGNGRWAKNRGKL-RIFGHKAGVESAKKAIKFAINNHLNALTLYAFSSENWKRPIQEVS--DLMELFSSVLNNAIDSF-KKNNIRLKIIGDISKFNLKLQKYIKKSEKITYKNNGLNLNIAANYGGRWDIIQGVKK---IAKQVKKGIIYP-------------DQINESNFCRFICMNELVPV------DLVIRTGGEHRISNFLLWQIAYSELFFTDVLWPDFD--HVIFS 224
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_SHEON (Undecaprenyl pyrophosphate synthetase OS=Shewanella oneidensis GN=uppS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14 Identity = 56/246 (22.76%), Postives = 109/246 (44.31%), Query Frame = 1 Query: 76 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNF 813 +P H+A I+DGN R+A+ GH+AG + + +L ++ ++++AFS +N++R E+ L K V++ IG++ S ++ T+ N+ +++ + Y +I+ ++ + +K + + TE+A L +H+ M + D++IRT G+ R+SNF+LWQ++ L + LWP+ + AI F Sbjct: 36 LPKHVAIIMDGNGRWAQTQGKP-RVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSSENWRRPDKEVSLLMELFFTVLQREIK---LLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTAGNSGLILNVAANYGGRWDILQAAQK---LAEKVETGEMT----SSQFTEEA---------------LSEHLCMQNQSEVDLIIRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATF 255 The following BLAST results are available for this feature:
BLAST of CV885157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885157 ID=CV885157; Name=CV885157; organism=Citrus sinensis; type=EST; length=897bpback to top |