CV885157

Overview
NameCV885157
Unique NameCV885157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_STRP8 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus pyogenes serotype M18 GN=uppS PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 79/251 (31.47%), Postives = 114/251 (45.42%), Query Frame = 1
Query:   67 VGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            +G IP HI  I+DGN R+AKK  L     GH+AG   L  +     EL VK +++YAFS +N+ R Q+E+ +                  L +  V++  IG    + E    A    +  T +NT +++   L Y    EI   V     + +        P     D+TED           I    +  H+   +Y DPD++IRTSGE RLSNFL WQS+    Y    LWP+     L+ AI ++ R
Sbjct:   13 LGSIPKHIGIIMDGNGRWAKKR-LKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRPQDEVSFIMNLPVAFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNTGLILNFALNYGGRAEITSAVR---FIAQDVLDAKLNP----GDITEDL----------IANYLMTDHLPY-LYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNR 241          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_STRP6 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus pyogenes serotype M6 GN=uppS PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 79/251 (31.47%), Postives = 114/251 (45.42%), Query Frame = 1
Query:   67 VGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            +G IP HI  I+DGN R+AKK  L     GH+AG   L  +     EL VK +++YAFS +N+ R Q+E+ +                  L +  V++  IG    + E    A    +  T +NT +++   L Y    EI   V     + +        P     D+TED           I    +  H+   +Y DPD++IRTSGE RLSNFL WQS+    Y    LWP+     L+ AI ++ R
Sbjct:   13 LGSIPKHIGIIMDGNGRWAKKR-LKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRPQDEVSFIMNLPVAFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNTGLILNFALNYGGRAEITSAVR---FIAQDVLDAKLNP----GDITEDL----------IANYLMTDHLPY-LYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNR 241          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_STRP1 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus pyogenes serotype M1 GN=uppS PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 79/251 (31.47%), Postives = 114/251 (45.42%), Query Frame = 1
Query:   67 VGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            +G IP HI  I+DGN R+AKK  L     GH+AG   L  +     EL VK +++YAFS +N+ R Q+E+ +                  L +  V++  IG    + E    A    +  T +NT +++   L Y    EI   V     + +        P     D+TED           I    +  H+   +Y DPD++IRTSGE RLSNFL WQS+    Y    LWP+     L+ AI ++ R
Sbjct:   13 LGSIPKHIGIIMDGNGRWAKKR-LKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRPQDEVSFIMNLPVTFFDKYVPV---LHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNTGLILNFALNYGGRAEITSAVR---FIAQDVLDAKLNP----GDITEDL----------IANYLMTDHLPY-LYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNR 241          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_PORGI (Undecaprenyl pyrophosphate synthetase OS=Porphyromonas gingivalis GN=uppS PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 68/240 (28.33%), Postives = 113/240 (47.08%), Query Frame = 1
Query:   55 RILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 774
            ++ S  ++P HIA ++DGN R+AK         GH AG   L   L+      V+Y++ Y FS +N+ R + E+R                   L    +R+  IG+   + E +R + EK +R T+ NT + +++ L+YSS  E+   +     + +K +  + +P +   D+  D                   H+     PDPD+ IRT GE R+SNFL+WQ +   L+  + LWP+
Sbjct:    7 KLQSAVIVPRHIALVMDGNGRWAKIRGKE-RCEGHAAGVDALRVALRAAAGCGVEYLTAYTFSTENWNRPEEEVRALMGLFVTAIMNEMLD---LMTNNIRLLAIGDFSRLPEDVRESLEKGIRETAGNTGLTLVLALSYSSRWEMTDVIRR---LARKVRDGSVEPEDINVDLVSD-------------------HLSTAGIPDPDLFIRTGGEKRISNFLMWQMAYTELFFTDTLWPD 220          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_MICLU (Undecaprenyl pyrophosphate synthetase OS=Micrococcus luteus GN=uppS PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 72/255 (28.24%), Postives = 122/255 (47.84%), Query Frame = 1
Query:   61 LSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHH 825
            ++   IP HIA I+DGN R+AK+  +     GH  G  T+  + +Y  +L VKY+++YAFS +N+ R ++E+ Y                  L +  V+V  IG +  + +  + A  +    T  NT + ++  L Y   +EI+  V+   L+ ++        ++ +  + E ++ H N+            +++    PDP++LIRTSGE RLSNFL+WQ S       +  WP+     L   I  +Q  H
Sbjct:   15 INAAQIPKHIAIIMDGNGRWAKQKKMP-RIKGHYEGMQTVKKITRYASDLGVKYLTLYAFSTENWSRPKDEVNYLMKLPGDFLNTFLPE---LIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGLTLVFALNYGGRKEIISAVQ---LIAERY-------KSGEISLDEISETHFNE------------YLFTANMPDPELLIRTSGEERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRH 243          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_BACTN (Undecaprenyl pyrophosphate synthetase OS=Bacteroides thetaiotaomicron GN=uppS PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 72/248 (29.03%), Postives = 117/248 (47.18%), Query Frame = 1
Query:   76 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            IP HIA I+DGN R+AK+        GH+AG  T+  +++    L VKY+++Y FS +N+ R Q E+                 +  L K  +R   IG++  +   ++    + +  T+ NT   +++ L+YSS  E+   V +   + K  +       +P+    +  DE+            +  H+     PDPD+LIRT GE RLSN+LLWQ +   LY  +  WP+        AI  +Q+
Sbjct:   12 IPQHIAIIMDGNGRWAKQRGKE-RTYGHQAGAETVHKIIEDAARLGVKYLTLYTFSTENWNRPQEEVA-----ALMNLLVDSIEEETLMKNNIRFRIIGDIKKLPAEVQEGLSRCIEHTANNTGTCLVLALSYSSRWEMTEAVRQIATLAKTGEI------SPE----QITDEY------------ITAHLTTNFMPDPDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFCKAIYEYQQ 231          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_TREDE (Undecaprenyl pyrophosphate synthetase OS=Treponema denticola GN=uppS PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 73/247 (29.55%), Postives = 119/247 (48.18%), Query Frame = 1
Query:   85 HIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHH 825
            HIA ++DGN R+AKK  L     GH+ G  T+  + K   +L + Y+++Y FS +N+KRT+ E+ +                 F +   +R+  IGNL  + + I+     V   TS  T   I++ + Y + +EI+  +++                     +  D     N+E  ++KL         G  P  D+LIRT GE RLSNFLLWQS+   LY  + LWP+  + +L  AI ++++ +
Sbjct:    7 HIAIVMDGNGRWAKKRGLP-RSMGHKEGLNTVKRITKAVSDLGIPYITLYIFSTENWKRTEAEVGFLMGLIKQHLKAELK---FYADNNIRIEHIGNLSGLPQDIQDEINSVRDKTSAYTGTAIVLGINYGAHDEILRAIKK---------------------LNSDELASINEESFSLKLDT-------GKIPPVDLLIRTGGEKRLSNFLLWQSAYAELYFTDTLWPDWTVENLYEAIEDYKKRN 221          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: DDPS3_ARATH (Dehydrodolichyl diphosphate synthase 3 OS=Arabidopsis thaliana GN=At5g58780 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 72/249 (28.92%), Postives = 120/249 (48.19%), Query Frame = 1
Query:   73 VIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            ++P H+A I+DGNRR+AK+  L     GH AG   L+   + C +L +  VS +AFS +N+ R + E++                  +  +   RV  IGNL  + E +    +++  AT    +  +++ + YS   +I+   +    + KK++    +         ED DE          L++ E       +P PD+LIRTSGE R+SNF LWQ +   L+    LWP+     L+ A++++QR
Sbjct:   69 LMPRHVAVIMDGNRRWAKRAGLL-TSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWGRHKIEVKCLMSLIQHYLKSKIQ---YFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKHLILAIDYSGRLDILRACKS---IVKKSEKGLIRE--------EDVDE---------ALIERELLTNCTEFPSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQR 293          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_NITEU (Undecaprenyl pyrophosphate synthetase OS=Nitrosomonas europaea GN=uppS PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.235e-23
Identity = 75/254 (29.53%), Postives = 120/254 (47.24%), Query Frame = 1
Query:   58 ILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            I   G IP HIA I+DGN R+A+K  L    AGH  G   +   +K C+E  V +++I+AFS +N++R   E++                   L + GVR   IG++      I    ++    T+ N+R+   +   Y    +I+  V +  ++T+          NP + VT D               D+ +H+ +   P+PD+ IRT GE R+SNFLLWQ +   LY  + LWP+     L  AI ++++
Sbjct:   11 IPETGAIPKHIAIIMDGNGRWARKRFLP-RIAGHTQGVEAVRGTIKACIERGVSHLTIFAFSSENWRRPAEEVKLLMQLFLAALEREVTG---LHENGVRFRVIGDISKFDPKIVDFVQQGEALTAGNSRLNFTVAANYGGRWDIMQAVRK--MITE----------NPDSAVTFDEP-------------DIARHLALADAPEPDLFIRTGGECRISNFLLWQLAYTELYFTDTLWPDFDASALDEAIASYRK 235          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS1_STRCO (Undecaprenyl pyrophosphate synthetase 1 OS=Streptomyces coelicolor GN=uppS1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.235e-23
Identity = 70/247 (28.34%), Postives = 112/247 (45.34%), Query Frame = 1
Query:   73 VIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNF 813
            ++P H+A ++DGN R+AK+  L     GH+ G   +M +L+  +E+ V  +S+YAFS +N+KR+  E+R+                  L + GVRV + G +  + + +    +     T  N R+ +  C+ Y    EI    +      +  +                 D  K  EK       L K++Y    PD D+ +R SGE R SN+LLWQS+   +   + LWP+   R L  A L F
Sbjct:   32 LVPEHVAIVMDGNGRWAKERGLP-RTEGHKVGAEQVMDVLQGAIEMGVGNISLYAFSTENWKRSPEEVRFLMNFNRDFIRKSRDT---LDELGVRVRWAGRMPRLWKSVAKELQVAQEQTKDNDRLTLYFCMNYGGRAEIADAAQALAEDVRAGK----------------LDPAKVNEKT------LAKYLYYPDMPDVDLFLRPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEF 252          
The following BLAST results are available for this feature:
BLAST of CV885157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
UPPS_STRP81.003e-2331.47Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_STRP61.003e-2331.47Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_STRP11.003e-2331.47Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_PORGI1.003e-2328.33Undecaprenyl pyrophosphate synthetase OS=Porphyrom... [more]
UPPS_MICLU1.003e-2328.24Undecaprenyl pyrophosphate synthetase OS=Micrococc... [more]
UPPS_BACTN1.003e-2329.03Undecaprenyl pyrophosphate synthetase OS=Bacteroid... [more]
UPPS_TREDE1.711e-2329.55Undecaprenyl pyrophosphate synthetase OS=Treponema... [more]
DDPS3_ARATH1.711e-2328.92Dehydrodolichyl diphosphate synthase 3 OS=Arabidop... [more]
UPPS_NITEU2.235e-2329.53Undecaprenyl pyrophosphate synthetase OS=Nitrosomo... [more]
UPPS1_STRCO2.235e-2328.34Undecaprenyl pyrophosphate synthetase 1 OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885157 ID=CV885157; Name=CV885157; organism=Citrus sinensis; type=EST; length=897bp
GAAGAAAGTAAACTGTGCAGGAAGCTGGGAGTTTTCATGAGGAAATGCGT
GTTTAGGATACTATCCGTGGGTGTTATTCCAAATCATATTGCATTCATAT
TGGACGGGAACCGAAGATTCGCCAAGAAGCACAATCTGGCAGGAGAGGGG
GCTGGTCACAGGGCTGGATTTTTGACCCTCATGTCCCTGTTGAAGTACTG
CGTCGAATTGAGTGTGAAGTATGTCTCTATCTACGCCTTCAGTATAGATA
ATTTCAAACGAACGCAAAACGAGATTCGATATTTGATGGATCTAATGTTG
GAAAAGATGGAGTTGCTGCTTCGGGAAGATGGTTTTCTTAGTAAATATGG
TGTCAGAGTATGTTTCATAGGCAACTTAGGACTAGTGAGTGAGCCTATTA
GGGTTGCAGCTGAAAAAGTGATGAGAGCTACTTCCAAAAACACCAGGATC
GTGATTCTAATCTGCCTGGCATATAGTTCCACTGAGGAGATCGTCCATAC
TGTTGAAGAAACCTGCCTCGTTACAAAGAAAACCCAGCCCCAAGCATTTA
AGCCACGTAATCCTCAAAATGATGTTACTGAAGATGCTGATGAGCATAAA
AATAAGGAGAAAAATACTATTAAGCTTGTAGATCTTGAGAAGCATATGTA
CATGGGTGTATATCCAGATCCTGACATCCTCATCCGAACTTCTGGCGAGA
ACCGCCTGAGCAATTTCCTTCTTTGGCAGAGCAGCAACTGCATGTTGTAT
GCCCCAGAAGCACTGTGGCCAGAAATTGGTTTGCGGCACTTGATCTGGGC
TATCTTGAACTTTCAACGACACCACGCCTATTTGGAAAAGAAGAAGAAGC
AGCTCTAGTATCCTTTGCCCCCTAGAACCATATACTATCTGAACAAC
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