CV885157

Overview
NameCV885157
Unique NameCV885157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_STRA5 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus agalactiae serotype V GN=uppS PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.502e-23
Identity = 79/250 (31.60%), Postives = 116/250 (46.40%), Query Frame = 1
Query:   76 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHH 825
            IP HI  I+DGN R+AKK  L     GH+AG   L  +      L VK +++YAFS +N+ R  +E+++                  L K  VRV  IG+   + +    A ++    T  N+ +V+   L Y    EI + ++E        Q       NP +D+TED   +            L  +    +Y DPD++IRTSGE RLSNFL WQS+    Y    LWP+     L  AI+++ + H
Sbjct:   17 IPAHIGIIMDGNGRWAKKR-LKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKFIMNLPVKFFDKYVPE---LDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALNYGGRSEITNAIKEIA------QDVLEAKLNP-DDITEDLVANH-----------LMTNSLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRH 244          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_STRA3 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus agalactiae serotype III GN=uppS PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.502e-23
Identity = 79/250 (31.60%), Postives = 116/250 (46.40%), Query Frame = 1
Query:   76 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQRHH 825
            IP HI  I+DGN R+AKK  L     GH+AG   L  +      L VK +++YAFS +N+ R  +E+++                  L K  VRV  IG+   + +    A ++    T  N+ +V+   L Y    EI + ++E        Q       NP +D+TED   +            L  +    +Y DPD++IRTSGE RLSNFL WQS+    Y    LWP+     L  AI+++ + H
Sbjct:   17 IPAHIGIIMDGNGRWAKKR-LKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKFIMNLPVEFFDKYVPE---LDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALNYGGRSEITNAIKEIA------QDVLEAKLNP-DDITEDLVANH-----------LMTNSLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRH 244          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_RICBR (Undecaprenyl pyrophosphate synthetase OS=Rickettsia bellii (strain RML369-C) GN=uppS PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.502e-23
Identity = 69/245 (28.16%), Postives = 114/245 (46.53%), Query Frame = 1
Query:   85 HIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            H+A I+DGN R+A  HNL  +  GHRAG   +  LL   + L + Y+++Y FS +N++R+  EI +                  L K G+++  IG L L+S+ ++      +  T  N ++ + I  +Y S +EI     +  + + KT+                           I   D++  +Y    PD D+LIR  G  R+SNFLLWQ++   LY  +  WP+     +I AI ++ +
Sbjct:    6 HLAIIMDGNARWAATHNLP-KSEGHRAGADKVHELLPEFINLKIPYITLYTFSSENWQRSNTEISFLMRLLNIYLKKELDN---LHKNGIKIKVIGRLNLLSDSLQKQINNAIELTKDNNKLTLCIAFSYGSRQEITDACTKI-IASGKTE---------------------------ILESDIQNALYDPEMPDVDLLIRPGGVFRISNFLLWQAAYAELYFSQKYWPDFNKEDIINAIDDYSK 218          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_MYCPF (Undecaprenyl pyrophosphate synthetase OS=Mycobacterium parafortuitum GN=uppS PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.502e-23
Identity = 71/242 (29.34%), Postives = 113/242 (46.69%), Query Frame = 1
Query:   76 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWA 801
            +P H+A ++DGN R+A +  L G   GH+ G   L+ +    +E+ +K++++YAFS +N+KR+  E+R+                  L+  GVR+ ++G+   +   +    +   + T  N  I I  C+ Y    EIV    E                     + ++A + K K  N I      KH++    PD D+ IRTSGE R SNFLLWQ++       + LWP+   R L WA
Sbjct:   67 VPQHVAVVMDGNGRWATQRGL-GRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTENWKRSTEEVRFLMGFNREVVRRRREN---LNDMGVRMRWVGSRPRMWSSVIKEFDIAEQMTVDNDVITINYCVNYGGRTEIVEAARE---------------------LAQEAVDGKIKP-NRISEAQFAKHLHRSDIPDVDLFIRTSGEQRASNFLLWQAAYAEYVFQDKLWPDYDRRDL-WA 281          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_PHOLL (Undecaprenyl pyrophosphate synthetase OS=Photorhabdus luminescens subsp. laumondii GN=uppS PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.492e-23
Identity = 65/234 (27.78%), Postives = 114/234 (48.72%), Query Frame = 1
Query:   73 VIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPE 774
            ++P H+A I+DGN R+AKK        GHRAG   + S + +  + +++ +++YAFS +N+ R + E+                    L K+ +R+  IG++G  SE ++    + ++ T+ NT + + I   Y    +IV +V++     K    +       Q D+TE+                +  +M +   P  D++IRT GE+R+SNFLLWQ +    Y  + LWP+
Sbjct:   15 LLPKHVAIIMDGNGRWAKKRGKL-RAFGHRAGIKAVRSAVSFSAKHNIESLTLYAFSSENWNRPEQEVSSLMELFIFALDSEIKS---LHKHNIRLSVIGDIGRFSERLQDRIHRSVKLTANNTGLQLNIAANYGGRWDIVQSVQKIAQQIKDNSLE-------QQDITEEL---------------VNNYMNLSQQPQVDLVIRTGGEHRISNFLLWQIAYAEFYFTDILWPD 222          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_RICTY (Undecaprenyl pyrophosphate synthetase OS=Rickettsia typhi GN=uppS PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.109e-22
Identity = 67/245 (27.35%), Postives = 116/245 (47.35%), Query Frame = 1
Query:   85 HIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            H+A I+DGN R+A +HNL  +  GH+AG   +  LL   + L++ Y+++Y FS +N++R+ +E+ +                  L + GV++  IG L L+   ++      +  T  N +I + I  +Y S +EIV    +                N +  V+E+               D++  +Y    PD D+LIR+ G  R+SNFLLWQ++   LY  +  WP+     +  AI ++ +
Sbjct:    6 HLAIIMDGNARWADQHNLT-KSEGHKAGADKIRELLPEFINLNIPYITLYTFSSENWQRSSSEVNFLIKLLSLYLKNELDS---LHENGVKIKVIGRLNLLRSSLQKQINNAIELTQNNNKIKLCIAFSYGSRQEIVDACTKII-------------ANGKKQVSEN---------------DIQHALYDPEMPDVDLLIRSGGVYRISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSK 218          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_RICPR (Undecaprenyl pyrophosphate synthetase OS=Rickettsia prowazekii GN=uppS PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.109e-22
Identity = 67/245 (27.35%), Postives = 114/245 (46.53%), Query Frame = 1
Query:   85 HIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            H+A I+DGN R+A +HNL  +  GH+AG   +  LL   + L++ Y+++Y FS +N++R+ +E+ +                  L + GV++  IG L L+   ++      +  T  N +I + I  +Y S +EIV                         D       H  K+   +   D++  +Y    PD D+LIR+ G  R+SNFLLWQ++   LY  +  WP+     +  AI ++ +
Sbjct:    6 HLAIIMDGNARWADRHNLT-KSEGHKAGADKIRELLPEFINLNIPYITLYTFSFENWQRSSSEVDFLIKLLSIYLKNELDS---LHENGVKIKVIGRLNLLRSSLQKQINNAIELTKNNNKIKLCIAFSYGSRQEIV-------------------------DACTKIIAHGKKQ---VSEYDIQHALYDPEMPDVDLLIRSGGVYRISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSK 218          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS1_CORDI (Undecaprenyl pyrophosphate synthetase 1 OS=Corynebacterium diphtheriae GN=uppS1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.109e-22
Identity = 61/231 (26.41%), Postives = 104/231 (45.02%), Query Frame = 1
Query:   79 PNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWP 771
            P H+A + DGNRR+A++   A    GHR G   +  ++++C    V+ V++Y  S +N  R  +E++                +        R+  +G+L L+ + +     +   +T+ NT + + + + Y   +EIV  V E                    D    A     +    I +  + KH+Y    PDPD++IRTSGE RLS FLLWQ++   ++  +  WP
Sbjct:   35 PEHVAIMCDGNRRWAREAGFADVTHGHRVGAKKIGEMVRWCAHTDVELVTVYLLSTENLGRASDELQMLFDIIGDVVDELASPET-----NCRLRLVGHLDLLPDDVSRRLTQAQDSTNDNTGVFVNVAVGYGGRQEIVDAVRELI------------------DAEAAAGTTATEMAEKISVDSISKHLYTSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWP 242          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_RICSI (Undecaprenyl pyrophosphate synthetase OS=Rickettsia sibirica GN=uppS PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.892e-22
Identity = 69/245 (28.16%), Postives = 113/245 (46.12%), Query Frame = 1
Query:   85 HIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            H+A I+DGN R+A +HNL  +  GH+AG   +  LL   + L++ Y+++Y FS +N++R+  E+ +                  L K GV++  IG L L+S  ++      +  T  N +I + I  +Y S +EIV     T ++T                            K  +   D++  +Y    PD D+LIR  G  R+SNFLLWQ++   LY     WP+     +  AI ++ +
Sbjct:    6 HLAIIMDGNARWADQHNLT-KSEGHKAGADKIRELLPEFLNLNIPYITLYTFSSENWQRSSTEVDFLIKLLSIYLKTELNN---LHKNGVKIKVIGRLTLLSSSLQKQINNAIELTKNNNKITLCIAFSYGSRQEIVDAC--TKIIT--------------------------SGKKAVSDSDIQHALYDPEMPDVDLLIRPGGVYRISNFLLWQAAYAELYFSPKYWPDFNKYDIQEAINDYSK 218          
BLAST of CV885157 vs. ExPASy Swiss-Prot
Match: UPPS_RICCN (Undecaprenyl pyrophosphate synthetase OS=Rickettsia conorii GN=uppS PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.892e-22
Identity = 69/245 (28.16%), Postives = 113/245 (46.12%), Query Frame = 1
Query:   85 HIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCVELSVKYVSIYAFSIDNFKRTQNEIRYXXXXXXXXXXXXXXXDGFLSKYGVRVCFIGNLGLVSEPIRVAAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEKNTIKLVDLEKHMYMGVYPDPDILIRTSGENRLSNFLLWQSSNCMLYAPEALWPEIGLRHLIWAILNFQR 819
            H+A I+DGN R+A +HNL  +  GH+AG   +  LL   + L++ Y+++Y FS +N++R+  E+ +                  L K GV++  IG L L+S  ++      +  T  N +I + I  +Y S +EIV     T ++T                            K  +   D++  +Y    PD D+LIR  G  R+SNFLLWQ++   LY     WP+     +  AI ++ +
Sbjct:   15 HLAIIMDGNARWADQHNLT-KSEGHKAGADKIRELLPEFLNLNIPYITLYTFSSENWQRSSTEVDFLIKLLSIYLKTELNN---LHKNGVKIKVIGRLTLLSSSLQKQINNAIELTKNNNKITLCIAFSYGSRQEIVDAC--TKIIT--------------------------SGKKAVSDSDIQHALYDPEMPDVDLLIRPGGVYRISNFLLWQAAYAELYFSPKYWPDFNKYDIQEAINDYSK 227          
The following BLAST results are available for this feature:
BLAST of CV885157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
UPPS_STRA56.502e-2331.60Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_STRA36.502e-2331.60Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_RICBR6.502e-2328.16Undecaprenyl pyrophosphate synthetase OS=Rickettsi... [more]
UPPS_MYCPF6.502e-2329.34Undecaprenyl pyrophosphate synthetase OS=Mycobacte... [more]
UPPS_PHOLL8.492e-2327.78Undecaprenyl pyrophosphate synthetase OS=Photorhab... [more]
UPPS_RICTY1.109e-2227.35Undecaprenyl pyrophosphate synthetase OS=Rickettsi... [more]
UPPS_RICPR1.109e-2227.35Undecaprenyl pyrophosphate synthetase OS=Rickettsi... [more]
UPPS1_CORDI1.109e-2226.41Undecaprenyl pyrophosphate synthetase 1 OS=Coryneb... [more]
UPPS_RICSI1.892e-2228.16Undecaprenyl pyrophosphate synthetase OS=Rickettsi... [more]
UPPS_RICCN1.892e-2228.16Undecaprenyl pyrophosphate synthetase OS=Rickettsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885157 ID=CV885157; Name=CV885157; organism=Citrus sinensis; type=EST; length=897bp
GAAGAAAGTAAACTGTGCAGGAAGCTGGGAGTTTTCATGAGGAAATGCGT
GTTTAGGATACTATCCGTGGGTGTTATTCCAAATCATATTGCATTCATAT
TGGACGGGAACCGAAGATTCGCCAAGAAGCACAATCTGGCAGGAGAGGGG
GCTGGTCACAGGGCTGGATTTTTGACCCTCATGTCCCTGTTGAAGTACTG
CGTCGAATTGAGTGTGAAGTATGTCTCTATCTACGCCTTCAGTATAGATA
ATTTCAAACGAACGCAAAACGAGATTCGATATTTGATGGATCTAATGTTG
GAAAAGATGGAGTTGCTGCTTCGGGAAGATGGTTTTCTTAGTAAATATGG
TGTCAGAGTATGTTTCATAGGCAACTTAGGACTAGTGAGTGAGCCTATTA
GGGTTGCAGCTGAAAAAGTGATGAGAGCTACTTCCAAAAACACCAGGATC
GTGATTCTAATCTGCCTGGCATATAGTTCCACTGAGGAGATCGTCCATAC
TGTTGAAGAAACCTGCCTCGTTACAAAGAAAACCCAGCCCCAAGCATTTA
AGCCACGTAATCCTCAAAATGATGTTACTGAAGATGCTGATGAGCATAAA
AATAAGGAGAAAAATACTATTAAGCTTGTAGATCTTGAGAAGCATATGTA
CATGGGTGTATATCCAGATCCTGACATCCTCATCCGAACTTCTGGCGAGA
ACCGCCTGAGCAATTTCCTTCTTTGGCAGAGCAGCAACTGCATGTTGTAT
GCCCCAGAAGCACTGTGGCCAGAAATTGGTTTGCGGCACTTGATCTGGGC
TATCTTGAACTTTCAACGACACCACGCCTATTTGGAAAAGAAGAAGAAGC
AGCTCTAGTATCCTTTGCCCCCTAGAACCATATACTATCTGAACAAC
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