CV885155

Overview
NameCV885155
Unique NameCV885155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_DROPE (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila persimilis GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L G L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VACLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHLAG-LIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_DROMO (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila mojavensis GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L G L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VACLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHLAG-LIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_DROME (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila melanogaster GN=eIF3-S6 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L G L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VACLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHLAG-LIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_DROGR (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila grimshawi GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L G L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VACLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHLAG-LIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_DROER (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila erecta GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L G L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VACLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHLAG-LIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_DROAN (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila ananassae GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L G L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VACLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHLAG-LIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EI3E2_DROWI (Eukaryotic translation initiation factor 3 subunit E-2 OS=Drosophila willistoni GN=eIF3-S6-2 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.315e-47
Identity = 97/187 (51.87%), Postives = 132/187 (70.59%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L G L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VACLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHLAG-LIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_ANOGA (Eukaryotic translation initiation factor 3 subunit E OS=Anopheles gambiae GN=eIF3-S6 PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.638e-46
Identity = 99/191 (51.83%), Postives = 133/191 (69.63%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRT--YKLVGQLLEHAQTQAA 569
            PH+LRYLATA I+N+ RR   KD IKVIQQE  +Y+DPITEFL  +YVN+DF+GA+KK+ EC+ VI+ND F+           +    EF+ENARL IFET+CRIHQ I + +LA+KLN+  +EA+ WIVNLIRN++LDAKID+K G V+M     + Y+QL++    LS R+    L+ +    A+TQ A
Sbjct:  246 PHILRYLATAVIINRGRRNALKDLIKVIQQESYTYRDPITEFLEHLYVNFDFEGARKKLHECQTVIVNDFFI-----------IGCLTEFVENARLMIFETFCRIHQCITIGMLADKLNMKPDEAECWIVNLIRNARLDAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSVRSEALTLLVERKHKAKTQEA 425
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EI3E1_DROWI (Eukaryotic translation initiation factor 3 subunit E-1 OS=Drosophila willistoni GN=eIF3-S6-1 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.638e-46
Identity = 96/187 (51.34%), Postives = 131/187 (70.05%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563
            PH++RYLATA ++N+ RR   KD IKVIQQE  +Y+DPITEFL C+YVN+DF+GA+ K+ EC+ VILND F+           V   +EF+E+ARL IFET+CRIHQ I +++LA+KLN+   EA+ WIVNLIRN++L+AKID+K G V+M     + Y+QL++    LS R+  L   L+E    Q
Sbjct:  248 PHIMRYLATAVVINRTRRNALKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFI-----------VSCLNEFVEDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSMRSEHL-ADLIERKSKQ 422
[Close]
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_AEDAE (Eukaryotic translation initiation factor 3 subunit E OS=Aedes aegypti GN=eIF3-S6 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.309e-45
Identity = 93/176 (52.84%), Postives = 125/176 (71.02%), Query Frame = 3 
Query:    3 PHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKL 530
            PH+LRYLATA I+N+ RR   KD IK+IQQE  +Y+DPITEFL  +YVN+DF+GA+ K+ EC+ VI+ND F+           +    EF+ENARL IFET+CRIHQ I + +LA+KLN+  +EA+ WIVNLIRN++LDAKID+K G V+M     + Y+QL++    LS R+  L
Sbjct:  248 PHILRYLATAVIINRGRRNALKDLIKIIQQESYTYRDPITEFLEHLYVNFDFEGARMKLHECQTVIVNDFFI-----------IGCLQEFIENARLMIFETFCRIHQCITIGMLADKLNMEPDEAECWIVNLIRNARLDAKIDSKLGHVVMGTQPLSPYQQLVEKIDSLSVRSEAL 412
The following BLAST results are available for this feature:
BLAST of CV885155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
EIF3E_DROPE5.315e-4751.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROMO5.315e-4751.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROME5.315e-4751.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROGR5.315e-4751.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROER5.315e-4751.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_DROAN5.315e-4751.87Eukaryotic translation initiation factor 3 subunit... [more]
EI3E2_DROWI5.315e-4751.87Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_ANOGA2.638e-4651.83Eukaryotic translation initiation factor 3 subunit... [more]
EI3E1_DROWI2.638e-4651.34Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_AEDAE1.309e-4552.84Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885155 ID=CV885155; Name=CV885155; organism=Citrus sinensis; type=EST; length=799bp
CTCCCCATCTTTTACGCTATTTAGCTACTGCATTCATTGTCAACAAAAGG
AGGAGACCTCAATTCAAAGATTTTATTAAGGTTATCCAGCAAGAGCAAAA
CTCGTACAAAGATCCCATTACAGAGTTTTTGGCATGTGTGTACGTCAATT
ATGACTTTGATGGGGCACAGAAGAAGATGAAGGAGTGTGAAGAAGTGATA
TTGAATGATCCTTTCCTTGGCAAACGAGTTGAAGATAGCAACTTTGCTAC
TGTTCCTTTGAGAGATGAGTTCCTCGAAAATGCTCGGCTATTCATCTTTG
AGACCTATTGTCGAATTCATCAACGCATTGATATGGCAGTGCTTGCTGAG
AAGTTGAATCTAAATTATGAGGAAGCTCAAAGATGGATTGTGAATCTTAT
TCGGAACTCAAAACTTGATGCCAAGATTGATGCAAAGTCGGGAACTGTTA
TCATGGAACCCACCCACCCCAACGTGTATGAGCAATTGATTGACCACACC
AAAGGACTTTCAGGACGTACTTACAAATTAGTCGGTCAACTTCTGGAACA
TGCACAAACACAAGCTGCGCGATAAATTATCAGAAGTACTTGTTGCAAGT
TGTCATCCCTGGAAATTGCTTCTTTAATTAGATTCAGAAGAGAGCAATTC
TATTGATAAATCATTTCATTTCCATTTTTCTTTCAAATTTTGGAAGAGTT
TATGATTATGTCCTCGGTGTTTGCTGTAACTTTGTTTAATTATTCAAAGA
TTAACATGTATCTTTCTGAAAGAGGTCATTCTTGTGAAATTTGTTTGAA
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