CV885155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_DICDI (Eukaryotic translation initiation factor 3 subunit E OS=Dictyostelium discoideum GN=eif3e PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.698e-32 Identity = 74/193 (38.34%), Postives = 117/193 (60.62%), Query Frame = 3 Query: 3 PHLLRYLATAFIVNKRRRPQ------FKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQLLEHAQTQ 563 PH+LRYLA A IVNK+++ ++V++QE Y+DPIT+F++ ++V ++F+ AQ ++ CE+V+ ND FL V DEF+ENAR+ +FETYC I + ID+ +L + L ++ E +++WIV IRN++ AKID+ + + M H N Y Q++D TK L R ++V + E Q Sbjct: 290 PHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQEAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVLKNDFFLNTCV-----------DEFMENARVCVFETYCNILESIDIDMLCKNLRIDPESSEKWIVEAIRNTRFSAKIDSANNQIKMFTQH-NSYRQVMDKTKALFNRGIEMVVGINESRSQQ 470
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_USTMA (Eukaryotic translation initiation factor 3 subunit E OS=Ustilago maydis GN=INT6 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.718e-29 Identity = 69/166 (41.57%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 39 VNKRRRPQ-FKDFIKVIQQEQNSYK----DPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRT 521 VNK Q KD + +I E SY+ DPI +FL+ ++V++DF+ AQ+++ E+V D FL +DE +E R+ I E YCRIH ++D+A L ++LNL+ E+ ++WIVNL+R+++ DAKID K G V M PTHP VY+ +I+ T+G + RT Sbjct: 308 VNKLSPQQAIKDIVNIIDSE--SYRIAGTDPIVDFLSKLFVDFDFEAAQEQLTLAEQVASKDFFLAD-----------FKDELVEACRVVISEAYCRIHSKVDIADLVKRLNLSKEDGEKWIVNLVRDTRADAKIDFKEGMVFMNPTHPPVYQTIIEKTRGFTFRT 460
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_CRYNE (Eukaryotic translation initiation factor 3 subunit E OS=Cryptococcus neoformans GN=INT6 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.527e-29 Identity = 74/183 (40.44%), Postives = 108/183 (59.02%), Query Frame = 3 Query: 3 PHLLRYLATAFIV--------NKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKL--DAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRT 521 PHLLRYL A I+ N R R K+ ++++ E+ Y DPIT FL V+ ++D AQ+++ E V+ +D FL S FA DEF+ENAR I E CR+H+RID+ L++ LNL+ EE ++WIVNLIR+S++ +AKID K + + H LI+ T+GL+ R+ Sbjct: 253 PHLLRYLVAAAIISRRAPKPANVRSRDHVKELTRIVETEEYQYTDPITSFLKDVFADFDLTQAQQRLSVAESVVRSDFFL------SGFA-----DEFVENARWLISEVICRLHRRIDIGQLSKTLNLSNEEGEKWIVNLIRDSRMGVEAKIDLKENMLHITRPHATPTATLIETTRGLAFRS 424
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_MONBE (Eukaryotic translation initiation factor 3 subunit E OS=Monosiga brevicollis GN=13685 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.426e-28 Identity = 62/181 (34.25%), Postives = 107/181 (59.12%), Query Frame = 3 Query: 3 PHLLRYLATAFIVNKRR-RPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNVYEQLIDHTKGLSGRTYKLVGQL 542 PHL RY I+++R+ R +F+ + +Q+++ DP+ FL + ++DF A++K+++C EV+ D FL + + DEF+ A+L++FE Y R+H R+ + A +L + ++A+ W+V LIR++KLDA+ID SG + + VY+ ++D TK L RTY +V L Sbjct: 246 PHLFRYATAVAIMSRRKKRDVMWEFVGIARQDKDLGDDPVVGFLVSLIKDFDFVTAEEKLQQCREVLSKDYFLAE-----------MTDEFINTAQLYLFEVYLRVHSRVSIKNAATRLGKSEDDAEEWLVKLIRDAKLDAQIDPASGEIHITKPVTTVYQHVLDRTKNLQYRTYVIVESL 415
BLAST of CV885155 vs. ExPASy Swiss-Prot
Match: EIF3E_SCHPO (Eukaryotic translation initiation factor 3 subunit E OS=Schizosaccharomyces pombe GN=int6 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.782e-18 Identity = 55/147 (37.41%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 3 PHLLRYLATAFIVN------KRRRPQ------FKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAQRWIVNLIRN 407 P LLRYL A + N K R P+ +D +++I QE Y DP+T F++ +Y DF+ AQ ++ECEEV+ D FL V L D FLE AR + E YCRIH I + VLA KL ++ + ++ L+ N Sbjct: 262 PWLLRYLTVAVVTNQNNANQKPRNPRQSYQRRMRDLVRIISQENYEYSDPVTSFISALYTEVDFEKAQHCLRECEEVLKTDFFL-----------VSLCDHFLEGARKLLAEAYCRIHSVISVDVLANKLEMDSAQ----LIQLVEN 393 The following BLAST results are available for this feature:
BLAST of CV885155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885155 ID=CV885155; Name=CV885155; organism=Citrus sinensis; type=EST; length=799bpback to top |