EY665370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 4.551e-68 Identity = 123/175 (70.29%), Postives = 146/175 (83.43%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL EI YL++SGW+PCLEFE E+G+VYREHH SPGYYDGRYWTMWKL M+GCTDATQVL EV E +K YP ++VR G DN RQVQ F+ Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 4.551e-68 Identity = 125/175 (71.43%), Postives = 143/175 (81.71%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASSM+SSA V T S AQA+MVAPFTGLKSS+AFP T+KTN DITSIASNGGRV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKL ++GCTD+ QVLKEV E +KEYP +F+R G DN RQVQ F+ Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 171
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS1A_ARATH (Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 7.763e-68 Identity = 124/175 (70.86%), Postives = 143/175 (81.71%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASSM+SSAT+ AS AQA+MVAPF GLKSS+AFPAT+K NNDITSI SNGGRV CM+VWPP G KKFETLSYLP L+D L KE++YLIR+ WIPC+EFELE G+VYREH SPGYYDGRYWTMWKL ++GCTD+ QVLKEV E +KEYP +F+R G DN RQVQ F+ Sbjct: 1 MASSMLSSATMV----ASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFI 171
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.324e-67 Identity = 116/175 (66.29%), Postives = 148/175 (84.57%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA VA+ N AS AQASMVAPFTGLKSS+ FP T+K N DIT++ASN G+VQCMKVWPP GL+KFETLSYLP +S+E L KE +YL+R+GW+PC+EF++ G+VYRE+H+SPG+YDGRYWTMWKL M+GCTD++QV++E+ E +KEYP +F+R G DN RQVQ F+ Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFI 175
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.324e-67 Identity = 123/175 (70.29%), Postives = 145/175 (82.86%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWKL M+GCTDATQVL EV E +K YP ++VR G DN RQVQ F+ Sbjct: 1 MASSIVSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.729e-67 Identity = 121/176 (68.75%), Postives = 147/176 (83.52%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYREH+ SPGYYDGRYWTMWKL M+GCTD TQVL EV E + YP +++R G DN RQVQ F+ Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFI 174
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 2.259e-67 Identity = 123/175 (70.29%), Postives = 145/175 (82.86%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWKL M+GCTDATQVL EV E +K YP ++VR G DN RQVQ F+ Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 2.950e-67 Identity = 121/175 (69.14%), Postives = 145/175 (82.86%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASSMISSAT+AT N +S AQA+MVAPFTGLKS+SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLP L+ L KE++YL+RS WIPCLEFELE+G+V+R++ P YYDGRYWTMWKL M+GCTD+ QVL+E+ +KEYP +F+R G DN RQVQ F+ Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFI 175
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.950e-67 Identity = 121/175 (69.14%), Postives = 147/175 (84.00%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA VAT RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKL M+GCTDATQVL EV E +K YP +++R G DN RQVQ F+ Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 2.950e-67 Identity = 122/176 (69.32%), Postives = 148/176 (84.09%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++SSA AT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E+G+VYRE++ SPGYYDGRYWTMWKL M+GCTDATQVL EV E +K YP ++VR G DN RQVQ F+ Sbjct: 1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFI 174 The following BLAST results are available for this feature:
BLAST of EY665370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665370 ID=EY665370; Name=EY665370; organism=Citrus sinensis; type=EST; length=998bpback to top |