EY665370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.438e-13 Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 1 Query: 220 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQ 522 KFETLSYLP L+ + + +++ Y++ GW P +E H P G YW MWKL M+G TD +LKE K P + VR G DN +Q Q Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQ 106
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.453e-13 Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 217 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +++ETLSYLPPL+D + K++ Y++ G+IP +EF YWT+WKL ++G + +VL EV + +YP ++R G DN +Q Q F+ Sbjct: 8 RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFN------------EVSEPTELYWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFI 102
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.184e-13 Identity = 35/107 (32.71%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 217 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +KFET SYLPPL+D+ + +++ Y + +G+ P +EF G + WT+WKL ++G +VL E+ ++++P +++R D+ RQVQ FL Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEFSFT------------GKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFL 101
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_PSEHY (Ribulose bisphosphate carboxylase small chain OS=Pseudomonas hydrogenothermophila GN=cbbS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 9.320e-13 Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 217 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQ 522 K+FET SYLP +S E + K+I Y++ GW P +E H P YW MWKL M+G TD +++ E+ ++ P ++ G DN RQ Q Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE------------HCEPENAILHYWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQ 113
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_ALVHS (Ribulose bisphosphate carboxylase small chain OS=Alvinoconcha hessleri symbiotic bacterium GN=cbbS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.217e-12 Identity = 39/102 (38.24%), Postives = 49/102 (48.04%), Query Frame = 1 Query: 217 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQ 522 +KFET SYLP L E + K++ Y++ GW P +E H P YW MWKL M+G TD +L E K +P VR G DN Q Q Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVE------------HTEPENAFDHYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQ 106
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS1_CHRVI (Ribulose bisphosphate carboxylase small chain 1 OS=Chromatium vinosum GN=cbbS1 PE=1 SV=4) HSP 1 Score: 74.3294 bits (181), Expect = 1.217e-12 Identity = 37/100 (37.00%), Postives = 50/100 (50.00%), Query Frame = 1 Query: 217 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQ 516 +KFET SYLP + + + K++ Y++ GW P +E H P YW MWKL M+G TD +LKE K +P + VR G DN Q Sbjct: 17 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIE------------HTEPENAFDHYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQ 104
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_HYDMR (Ribulose bisphosphate carboxylase small chain 2 OS=Hydrogenovibrio marinus GN=cbbS-2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.542e-12 Identity = 36/103 (34.95%), Postives = 51/103 (49.51%), Query Frame = 1 Query: 226 ETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHF 534 ET S+LP + + + +I Y+I GW P LE H++P YW MWKL M+G D VL E+ + + YP +R G DN Q Q ++F Sbjct: 15 ETFSFLPEFTADEIYDQIVYIINQGWTPALE------------HEAPEAASSHYWGMWKLPMFGTRDPNAVLAEIDQCRAAYPNHMIRLIGYDNYTQCQGHNF 105
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.626e-12 Identity = 38/102 (37.25%), Postives = 51/102 (50.00%), Query Frame = 1 Query: 217 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQ 522 +KFET SYLP ++ + K++ YL+ GW P +E H P + YW MWKL M+G TD ++L E K P + VR G DN Q Q Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.030e-11 Identity = 40/107 (37.38%), Postives = 52/107 (48.60%), Query Frame = 1 Query: 217 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +K ET SYLP ++ + + ++ Y+I GW P +E H P YW MWKL M+G TDA VL EV K P + VR G DN Q Q + L Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQGANML 111
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_CHRVI (Ribulose bisphosphate carboxylase small chain 2 OS=Chromatium vinosum GN=cbbS2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.723e-11 Identity = 36/106 (33.96%), Postives = 54/106 (50.94%), Query Frame = 1 Query: 220 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 ++ET SYLPPL+ E +L++I Y++ +GW LE H+ P YW MWK+ +G D +L E+ ++ YP VR G D Q + + FL Sbjct: 15 RYETFSYLPPLNREEILEQILYILDNGWNASLE------------HEHPDRAFEYYWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFL 108 The following BLAST results are available for this feature:
BLAST of EY665370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665370 ID=EY665370; Name=EY665370; organism=Citrus sinensis; type=EST; length=998bpback to top |