EY665370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.207e-64 Identity = 119/175 (68.00%), Postives = 142/175 (81.14%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 ++S M+SSA AT RAS AQ+SMVAPFTGLKS+SAFP T+K N D++ + SNGGRVQCMKVWP G+KKFETLSYLP + DEAL+K+I YL+RS WIPCLEF KG+V+RE+H+SPGYYDGRYWTMWKL M+GCTDA QV KEV E +KEYP +F+R G DN RQVQ F+ Sbjct: 2 VSSMMVSSA--ATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEF-CPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCISFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS5_MESCR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-5 PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 6.801e-64 Identity = 116/175 (66.29%), Postives = 140/175 (80.00%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM VWPP G+KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKL M+GCTD +QV+ E+ E +K YP +F+R G DN RQVQ F+ Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSISAFPVTRK-NNDITSVASNGGRVQCM-VWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFI 173
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.515e-63 Identity = 111/168 (66.07%), Postives = 140/168 (83.33%), Query Frame = 1 Query: 34 SATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 S++VAT +R + AQA+MVAPFTGLKS++AFP TKK N D +++ SNGGRVQCMKVWPP GLKK+ETLSYLPPL++ L KE++YL+R W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKL M+GCTD+ QV+KE+ E +KEYP +++R G DN RQVQ F+ Sbjct: 5 SSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKAN-DFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFI 171
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.979e-63 Identity = 117/175 (66.86%), Postives = 140/175 (80.00%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASSM++S A RA AQ+SMVAPF GL+SS AFPAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E G+VYRE+H SPGYYDGRYWTMWKL M+GCTDA+QV+ EV E +K YP FVR G DNKRQVQ F+ Sbjct: 1 MASSMMAST--AAVARAGPAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFI 172
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.979e-63 Identity = 118/175 (67.43%), Postives = 141/175 (80.57%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS ++VATA RA+ AQASMVAPF GLKS+SAFP T+K ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YLIR+GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWKL M+GCTDA QV+KE E +KEYP +F+R G DN RQVQ F+ Sbjct: 1 MASSATMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFI 174
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_MESCR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.979e-63 Identity = 117/173 (67.63%), Postives = 139/173 (80.35%), Query Frame = 1 Query: 19 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +SM+S+A V R + AQASMVAPFTGLKS SAFP TKK+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKL M+GCTD +QV+ E+ E +K YP +F R G DN RQVQ F+ Sbjct: 2 ASMMSNAAVV--GRTTPAQASMVAPFTGLKSVSAFPVTKKSN-DITSIASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGFDNVRQVQCISFI 171
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS4_FLAPR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Flaveria pringlei GN=RBCS4 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 3.375e-63 Identity = 112/168 (66.67%), Postives = 141/168 (83.93%), Query Frame = 1 Query: 34 SATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 S+TVAT +RA+ AQA+MVAPFTGLKS++AFPATKK N D +++ SNGGRVQCMKVWPP G KK+ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKL M+GCTD+ QV+KE+ E +KEYP +++R G DN RQVQ F+ Sbjct: 5 SSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKAN-DFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFI 171
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.283e-62 Identity = 117/175 (66.86%), Postives = 140/175 (80.00%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASS ++VATA + AQASMVAPF GLKS+SAFP T+KT ++++ SNGGRVQCMKVWP GLKKFETLSYLP LS E+LLK+I YLIR+GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWKL M+GCTDA QV+KE E +KEYP +F+R G DN RQVQ F+ Sbjct: 1 MASSATMLSSVATAACVAPAQASMVAPFVGLKSASAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFI 174
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_SILPR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Silene pratensis GN=RBCS PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.675e-62 Identity = 115/173 (66.47%), Postives = 141/173 (81.50%), Query Frame = 1 Query: 19 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +S++S+A V TA+ A AQA+MVAPF+GLKS+SAFP ++K+N DITS+A+NGGRV CM+VWPP LKKFETLSYLP LS+E+LLKEINYL+ GW+PCLEFE+ VYRE++KSPGYYDGRYWTMWKL M+GCTDA+QV EV E + YP + VR G DNKRQVQ F+ Sbjct: 2 ASLMSNAAVVTASTA--AQANMVAPFSGLKSTSAFPVSRKSNVDITSLATNGGRVNCMQVWPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEFEVGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYPDAHVRIIGFDNKRQVQCISFI 172
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.675e-62 Identity = 115/175 (65.71%), Postives = 138/175 (78.86%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 MASSM++S A R AQ +MVAPF GL+SS AFPAT+K NND++++ SNGGRV CM+VWPP GLKKFETLSYLPPLS E L KE++YL+R+ W+PC+EF E G+VYRE+H SPGYYDGRYWTMWKL M+GCTDA+QV+ EV E +K YP FVR G DNKRQVQ F+ Sbjct: 1 MASSMMAST--AAVARVGPAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFI 172 The following BLAST results are available for this feature:
BLAST of EY665370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665370 ID=EY665370; Name=EY665370; organism=Citrus sinensis; type=EST; length=998bpback to top |