EY665370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 7.853e-28 Identity = 66/164 (40.24%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL-----------WCQATKRSRSQLNLCNPPVQYLLNYFYVEPP 630 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ W A ++ + NP F PP Sbjct: 997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPP 1160 HSP 2 Score: 124.405 bits (311), Expect = 1.026e-27 Identity = 66/163 (40.49%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL----------WCQATKRSRSQLNLCNPPVQYLLNYFYVEPP 630 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ W A + + NP F PP Sbjct: 279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPP 441 HSP 3 Score: 124.405 bits (311), Expect = 1.026e-27 Identity = 66/163 (40.49%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL----------WCQATKRSRSQLNLCNPPVQYLLNYFYVEPP 630 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ W A + + NP F PP Sbjct: 566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPP 728 HSP 4 Score: 124.405 bits (311), Expect = 1.026e-27 Identity = 66/165 (40.00%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL------------WCQATKRSRSQLNLCNPPVQYLLNYFYVEPP 630 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ W A ++ + NP F PP Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPP 873 HSP 5 Score: 124.02 bits (310), Expect = 1.340e-27 Identity = 66/164 (40.24%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL-----------WCQATKRSRSQLNLCNPPVQYLLNYFYVEPP 630 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ W A + + NP F PP Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPP 298 HSP 6 Score: 122.865 bits (307), Expect = 2.984e-27 Identity = 61/132 (46.21%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFLWCQATKRSRS 567 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ + + RS Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSSGGRS 1272 HSP 7 Score: 122.094 bits (305), Expect = 5.090e-27 Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL-----------WCQATKRSRSQLNLCNPPVQYLLNYFYVEPP 630 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD YWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ W A + + NP F PP Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPP 585 HSP 8 Score: 121.324 bits (303), Expect = 8.683e-27 Identity = 66/164 (40.24%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL-----------WCQATKRSRSQLNLCNPPVQYLLNYFYVEPP 630 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKL M+GCTDA+QVL+E+ E ++ YP +VR D+ +QVQ F+ W A + + NP F PP Sbjct: 854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRPSGSSSSSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPP 1016
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.026e-27 Identity = 74/181 (40.88%), Postives = 97/181 (53.59%), Query Frame = 1 Query: 13 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF-ELEKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +A S +S+A A S V P LK PA K + A+ M VW P K FET SYLPPL+DE + +++Y++ +GWIPCLEF E +K +V E G YYD RYWTMWKL M+GC D QVL+E+ K +P ++VR DN++QVQ FL Sbjct: 5 IAKSSVSAAVARPAR-------SSVRPMAALK-----PAVKAAPVAAPAQANQ------MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFL 167
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.648e-27 Identity = 60/138 (43.48%), Postives = 81/138 (58.70%), Query Frame = 1 Query: 193 KVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFE------LEKGWVYREHHKSPGYYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL---------WCQATKRS 561 KVW P K++ET SYLPPL+++ + ++++Y+I +GW PCLEF + R S GYYD RYWTMWKL M+GCTD +QVL+EV Q +P ++R DN +QVQ FL +C KRS Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRPRNAAEYCPLEKRS 167
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.351e-26 Identity = 63/147 (42.86%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 121 FPATKKTNNDITSIASNGGRVQC--MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 FP K N ASN +C M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKL M+GCTD +QVL E+ K +P +++R D RQVQ + FL Sbjct: 22 FPRATKNNK---GFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFL 165
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 6.223e-25 Identity = 62/152 (40.79%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 100 GLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 G SA P + A N R M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKL M+GCTD +QVL E+ K +P +++R D RQVQ + FL Sbjct: 15 GCTKPSAVPKVSINRKGFLNTAMNKKRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFL 164
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 8.127e-25 Identity = 64/166 (38.55%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 61 ASLAQASMVAPFTGLKSSSAFPATKKTNNDITS-IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 A++ ++V G SS+ P S +A R M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKL M+GCTD +QVL E+ K +P +++R D RQVQ + FL Sbjct: 3 AAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMKKSRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFL 166
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS_BATOE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Batophora oerstedii GN=RBCS PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.061e-24 Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 166 SNG--GRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFE-LEKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 SNG + + M VW P K FET SYLPPL+D+ + K+++Y++R+ W PCLEF ++ +V ++ G Y D RYWTMWKL M+GC D +QVL E+ K +P +++R D RQVQ + FL Sbjct: 26 SNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQVQISGFL 157
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS6_ACECL (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Acetabularia cliftonii GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.365e-24 Identity = 55/122 (45.08%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ + G Y D RYWTMWKL M+GCTD +QVL E+ K +P +++R D RQVQ + FL Sbjct: 43 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFL 164
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 5.268e-24 Identity = 55/122 (45.08%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 190 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 M VW P K FET S+LPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKL M+GCTDA+QVL E+ K +P +++R D RQVQ + FL Sbjct: 43 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFL 164
BLAST of EY665370 vs. ExPASy Swiss-Prot
Match: RBS4_ACEAT (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia acetabulum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.985e-24 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 115 SAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLAMYGCTDATQVLKEVGEVQKEYPLSFVRNFGIDNKRQVQWNHFL 537 +A P + S +N R M VW P K FET S+LPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKL M+GCTD +QVL E+ +P +++R D RQVQ + FL Sbjct: 20 AATPKVVTSKRSFASTVANKNRE--MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFL 164 The following BLAST results are available for this feature:
BLAST of EY665370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665370 ID=EY665370; Name=EY665370; organism=Citrus sinensis; type=EST; length=998bpback to top |