CV885146

Overview
NameCV885146
Unique NameCV885146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.000e-37
Identity = 83/189 (43.92%), Postives = 117/189 (61.90%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA------GSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+  DG+   V+ I  S+L     + F E++   S+L HPNI+ L+G+C E G+HLLVYE+  + SL++ +H  DE  KPL W  R++IA+G ARAL+YLH      + H ++K+ NILLD EL P+++DCGLAS  P    ++   A       +GY APE    G    KSD Y+ GV++LELLTGR
Sbjct:  432 AKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMH--DEVYKPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNTGYIAPEHGQPGSSGTKSDTYALGVLLLELLTGR 618          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.423e-36
Identity = 83/182 (45.60%), Postives = 116/182 (63.74%), Query Frame = -3
Query:    8 AVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLD-----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 529
            A+KK+DS+  P    ++F+  VS +S+L H N ++L+GYC +    +L YEF  NGSLHD LH        +    L W  RVKIA+G AR LEYLHE  +  ++H++IKS+N+LL  +   +++D  L++  P+    L++       GY APE AM+GQ N KSDVYSFGVV+LELLTGR
Sbjct:   99 AIKKLDSNKQPD---NEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 277          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 7.544e-36
Identity = 84/186 (45.16%), Postives = 118/186 (63.44%), Query Frame = -3
Query:    8 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLD-----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 541
            G+  A+KK+DSS  P     +F+  VS +S+L   N++EL+GYC + G  +L YE+  NGSLHD LH        +    L W  RVKIA+G A+ LEYLHE     ++H++IKS+NILL ++   +++D  L++  P+    L++       GY APE AM+GQ + KSDVYSFGVV+LELLTGR
Sbjct:   90 GRAAAIKKLDSSKQPDR---EFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGR 272          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.423e-34
Identity = 82/183 (44.81%), Postives = 115/183 (62.84%), Query Frame = -3
Query:    2 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS-NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRNH 544
            DG ++AVK++ + +       +F+  +  IS LHHPN+++L G C E GQ LLVYEF +N SL   L    E    L W +R KI +G AR L YLHE   L +VH++IK+ N+LLD +LNP++SD GLA  +  ++       AG+ GY APE AM G    K+DVYSFG+V LE++ GR++
Sbjct:  645 DGTIIAVKQLSTGSKQGNR--EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSN 825          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.858e-34
Identity = 82/192 (42.71%), Postives = 118/192 (61.46%), Query Frame = -3
Query:    8 CAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLD-----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 559
            C +F  G+ +A+KK+D+S+   E   DF   +S +S+L H + +EL+GYC E    +L+Y+F   GSLHD LH        E    L WN RVKIA G A+ LE+LHE     +VH++++S+N+LL ++   +++D  L +   +    L++       GY APE AM+GQ   KSDVYSFGVV+LELLTGR
Sbjct:   89 CGKFK-GEAVAIKKLDASS-SEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGR 278          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.504e-33
Identity = 77/181 (42.54%), Postives = 113/181 (62.43%), Query Frame = -3
Query:    8 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 541
            G V+AVK+++          +++  ++ + QL HPN+++L+GYC E    LLVYEF   GSL + L       +PL WN+RV++ALG AR L +LH      V++++ K++NILLD+  N +LSD GLA + P  D +  +       GY APE   +G  ++KSDVYSFGVV+LELL+GR
Sbjct:  100 GIVIAVKRLNQEGFQGHR--EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGR 277          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.504e-33
Identity = 82/189 (43.39%), Postives = 115/189 (60.85%), Query Frame = -3
Query:    8 LQCAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 565
            L  ++   G V+AVKK+ +         +++  V+ + QL HPN+++LVGYC E    LLVYEF   GSL +  HL     +PL W  R+K+A+G A+ L +LH+  S  V++++ K+ANILLD E N +LSD GLA   P  D+   +       GY APE   +G+   KSDVYSFGVV+LELL+GR
Sbjct:  107 LTASKPGSGIVVAVKKLKTEGYQGHK--EWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKS-QVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGR 290          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.977e-33
Identity = 79/185 (42.70%), Postives = 108/185 (58.38%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A F DG   AVK++       +M  +F   V  +S+  H N++ L GYC      LL+Y F +NGSL  +LH   + N  LIW+ R+KIA G AR L YLH+VC  +V+H+++KS+NILLD +    L+D GLA  +   D  +  D     GY  PE + S     + DVYSFGVV+LEL+TGR
Sbjct:  771 ANFPDGSKAAVKRLSGDC--GQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGR 953          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.332e-32
Identity = 81/202 (40.10%), Postives = 122/202 (60.40%), Query Frame = -3
Query:    8 CGMSHWL*SPMCLQCAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLL-DEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 601
            C    WL     L   + + G V+AVK+++          +++  ++ + QL HPN+++L+GYC E  Q LLVYEF   GSL + L    ++D KPL W  R+K+AL  A+ L +LH    + V++++IK++NILLD++ N +LSD GLA + P  +++  +       GY APE   +G  N +SDVYSFGVV+LELL GR
Sbjct:   74 CVFRGWL-DETTLTPTKSSSGLVIAVKRLNPDGFQGHR--EWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHS-DPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGR 271          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.966e-32
Identity = 82/201 (40.80%), Postives = 116/201 (57.71%), Query Frame = -3
Query:    8 CGMSHWL*SPMCLQCAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 601
            C    W+     L  ++   G V+AVK++           +++  V+ + QL HPN++ LVGYC+E    LLVYEF   GSL +  HL     +PL W  R+K+A+G A+ L +LHE  S  V++++ K+ANILLD + N +LSD GLA   P  D    +       GY APE   +G+   KSDVYSFGVV+LEL++GR
Sbjct:   99 CVFKGWI-DQTSLTASRPGSGIVVAVKQLKPEGFQGHK--EWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKS-QVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR 293          
The following BLAST results are available for this feature:
BLAST of CV885146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRF2_ARATH4.000e-3743.92Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
Y2706_ARATH4.423e-3645.60Probable receptor-like protein kinase At2g47060 OS... [more]
PTI1_SOLLC7.544e-3645.16Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y1534_ARATH1.423e-3444.81Probable LRR receptor-like serine/threonine-protei... [more]
Y2197_ARATH1.858e-3442.71Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
NAK_ARATH3.504e-3342.54Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2B_ARATH3.504e-3343.39Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
PSKR2_ARATH5.977e-3342.70Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y3545_ARATH1.332e-3240.10Probable receptor-like protein kinase At3g55450 OS... [more]
APK2A_ARATH2.966e-3240.80Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885146 ID=CV885146; Name=CV885146; organism=Citrus sinensis; type=EST; length=975bp
AATGGTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAAAACTGTAG
ACATCACTTTTTATATTATATTGACCAGACATCGCAACCTCAGGTGCACC
ATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATTTGGCATAT
TGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGTTGTCCAGT
AATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGTGAGCAGAC
TTCATGCAGGTACTCCAGTGCTCGTGCGGTCCCCAAAGCAATCTTGACGC
GGGAGTTCCATATCAAAGGCTTGTTGTCTTCATCCAACAGATGCAAGAAG
TCGTGCAGTGAACCATTTTTACGGAACTCATACACTAGCAGGTGCTGTCC
ATACTCTGAACAATAACCCACTAGCTCCATTATGTTCGGGTGATGCAGCT
GGGATATGTTTGAAACCATCTCGATAAAATCATCACACATTTCACTGGGA
AGGGCAGACGAATCTATTTTCTTCACTGCAAGAACCTTTCCATCGGCAAA
TTGTGCACATTGGAGACACATTGGAGATTATAACCAATGGGACATACCGC
AGCATTGAGCATCGTGCAGTTGTAAACTCTGTACAGGAAAGACTTTCCGT
TGCCACAGTTTACTCAGTGAGATATGATGGTGAAGTATATCCTGCCTCCA
GTTTGATCTCTGAAAAAACTCCTCCTTTGTTTAGAAGAGTGAGAATTGAA
GAATACTTTAGGAGCCGGTATGCTCGTGAGCTTAGGGGAAAATCTCAGCT
GGATTCCCTGAGAATTCAACATGGTCAAGGCTAGTATAAGTTTATTTCGG
ATAACTAAAGAGTTTGGTACAAAAACTCTGAAGGACCTTGCTATTGAGAT
TGTGTGTGGAACTGAAAATAAGAAATAAGTTCTATGAATACTGTGGTATA
ACCTGCCATGCTGGGATCGTTGTGT
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