CV885146

Overview
NameCV885146
Unique NameCV885146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.426e-26
Identity = 64/178 (35.96%), Postives = 109/178 (61.24%), Query Frame = -3
Query:    8 LAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLI-WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 532
            +AVKKI  +++      +FI  + ++ +L H N++ L G+C +    LL+Y++  NGSL   L+     +  ++ WN+R KIA G A  L YLHE     V+H++IK +N+L+++++NP+L D GLA       ++         GY APE+A +G+ +  SDV++FGV++LE+++GR
Sbjct:  388 IAVKKITPNSMQGVR--EFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGR 563          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.426e-26
Identity = 67/183 (36.61%), Postives = 107/183 (58.47%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A  +DG  +AVK+ +++ +       F   +  + ++ H NI+ L+GYCSE G+ LLVYE+  +G+LHD LH    D   L W+ R+KI L  AR L+YLH      ++H+++K++NILLD E+  +++D GL S+  N  ++ N+D                  + DVY FG+V+LE+L+GR
Sbjct:  536 AVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLH---GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVSS--NERDSSNSDR-----------------EGDVYDFGIVLLEILSGR 696          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 68/180 (37.78%), Postives = 100/180 (55.56%), Query Frame = -3
Query:   11 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTG 544
            +G V+AVK++       E+   F   V  I    H N++ L G+C    + +LVY +  NGS+ D L     +   L WN R+ IALG AR L YLHE C+  ++H+++K+ANILLD      + D GLA  +   D  +        G+ APE   +GQ + K+DV+ FGV++LEL+TG
Sbjct:  321 NGTVVAVKRLKDPIYTGEV--QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITG 498          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.432e-26
Identity = 69/184 (37.50%), Postives = 101/184 (54.89%), Query Frame = -3
Query:    8 QFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 553
            + ADG ++AVK++            F   V  IS   H N++ L G+C    + LLVY +  NGS+   L    E N  L W  R  IALG+AR L YLH+ C   ++H+++K+ANILLD E    + D GLA  M   D  +        G+ APE   +G+ + K+DV+ +GV++LEL+TG+
Sbjct:  312 RLADGNLVAVKRLKEERTKGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 494          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.432e-26
Identity = 71/186 (38.17%), Postives = 112/186 (60.22%), Query Frame = -3
Query:   11 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTG 556
            ++   G ++A+K+++S ++      ++   V+ +  L H N+++L+GYC E  + LLVYEF   GSL   L      N P  W+ R+KI +G AR L +LH +    V++++ K++NILLD+  + +LSD GLA   P ADE         G+ GY APE   +G   +KSDV++FGVV+LE++TG
Sbjct:  113 SRVGSGMIVAIKRLNSESVQGFA--EWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLF---RRNDPFPWDLRIKIVIGAARGLAFLHSL-QREVIYRDFKASNILLDSNYDAKLSDFGLAKLGP-ADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTG 291          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.177e-26
Identity = 72/192 (37.50%), Postives = 109/192 (56.77%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLH-LLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--------GSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A   DG + A+K+   +   ++  D  +  V  + Q++H +++ L+G C +    LL+YEF  NG+L + LH   D   KPL W  R++IA  TA  L YLH      + H+++KS+NILLD +LN ++SD GL S + +  E  NN++          GY  PE   + Q   KSDVYSFGVV+LE++T +
Sbjct:  380 AVLEDGTITAIKRAKLNN--TKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGL-SRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSK 568          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.177e-26
Identity = 73/193 (37.82%), Postives = 105/193 (54.40%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSAL-------PSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD--EALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A   +G+V+AVKK+  + +          + D F   V  +  + H NI+  +G C      LL+Y++  NGSL   LH  +     L W+ R +I LG A+ L YLH  C   +VH++IK+ NIL+  +  P ++D GLA  +   D     N  AGS GY APE   S +   KSDVYS+GVV+LE+LTG+
Sbjct:  803 ADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLH--ERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGK 993          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.177e-26
Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLH--LLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A   DG  +A+KK+   +   +   +F+  +  + ++ H N++ L+GYC    + LLVYEF + GSL + LH     E  + L W  R KIA G A+ L +LH  C   ++H+++KS+N+LLD ++  ++SD G+A  +   D  L+    AG+ GY  PE   S +   K DVYS GVVMLE+L+G+
Sbjct:  855 ATLKDGSSVAIKKLIRLSCQGDR--EFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGK 1040          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.149e-26
Identity = 65/181 (35.91%), Postives = 102/181 (56.35%), Query Frame = -3
Query:    8 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNN--DAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 544
            DG  +A+K+ +  +   +   +F   +  +S+L H +++ L+GYC E  + +LVYE+  NG   D  HL  ++  PL W  R++I +G AR L YLH   +  ++H+++KS NILLD  L  +++D GL+ ++      ++       GY  PE     Q   KSDVYSFGVV+LE L  R
Sbjct:  546 DGTQVAIKRGNPQS--EQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRD--HLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCAR 722          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.149e-26
Identity = 66/182 (36.26%), Postives = 104/182 (57.14%), Query Frame = -3
Query:    5 VLAVKK----IDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRN 535
            ++AVK+    ID       +  +F+  V  ++++ H N+++L G+CS      L+YE+ + GSL+  L   DE+ K L W  R+ +  G A AL Y+H      +VH++I S NILLDN+   ++SD G A  +       +  AG+ GY APE A + +   K DVYSFGV++LEL+ G++
Sbjct:  874 IIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLL-ANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKH 1054          
The following BLAST results are available for this feature:
BLAST of CV885146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LRKA2_ARATH1.426e-2635.96Lectin-domain containing receptor kinase A4.2 OS=A... [more]
ACCR2_ARATH1.426e-2636.61Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5457_ARATH1.862e-2637.78Probable LRR receptor-like serine/threonine-protei... [more]
SERK4_ARATH2.432e-2637.50Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CX32_ARATH2.432e-2638.17Probable serine/threonine-protein kinase Cx32, chl... [more]
WAKLQ_ARATH3.177e-2637.50Wall-associated receptor kinase-like 20 OS=Arabido... [more]
RCH2_ARATH3.177e-2637.82Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
BRL2_ARATH3.177e-2637.23Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y2214_ARATH4.149e-2635.91Probable receptor-like protein kinase At2g21480 OS... [more]
Y1571_ARATH4.149e-2636.26Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885146 ID=CV885146; Name=CV885146; organism=Citrus sinensis; type=EST; length=975bp
AATGGTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAAAACTGTAG
ACATCACTTTTTATATTATATTGACCAGACATCGCAACCTCAGGTGCACC
ATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATTTGGCATAT
TGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGTTGTCCAGT
AATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGTGAGCAGAC
TTCATGCAGGTACTCCAGTGCTCGTGCGGTCCCCAAAGCAATCTTGACGC
GGGAGTTCCATATCAAAGGCTTGTTGTCTTCATCCAACAGATGCAAGAAG
TCGTGCAGTGAACCATTTTTACGGAACTCATACACTAGCAGGTGCTGTCC
ATACTCTGAACAATAACCCACTAGCTCCATTATGTTCGGGTGATGCAGCT
GGGATATGTTTGAAACCATCTCGATAAAATCATCACACATTTCACTGGGA
AGGGCAGACGAATCTATTTTCTTCACTGCAAGAACCTTTCCATCGGCAAA
TTGTGCACATTGGAGACACATTGGAGATTATAACCAATGGGACATACCGC
AGCATTGAGCATCGTGCAGTTGTAAACTCTGTACAGGAAAGACTTTCCGT
TGCCACAGTTTACTCAGTGAGATATGATGGTGAAGTATATCCTGCCTCCA
GTTTGATCTCTGAAAAAACTCCTCCTTTGTTTAGAAGAGTGAGAATTGAA
GAATACTTTAGGAGCCGGTATGCTCGTGAGCTTAGGGGAAAATCTCAGCT
GGATTCCCTGAGAATTCAACATGGTCAAGGCTAGTATAAGTTTATTTCGG
ATAACTAAAGAGTTTGGTACAAAAACTCTGAAGGACCTTGCTATTGAGAT
TGTGTGTGGAACTGAAAATAAGAAATAAGTTCTATGAATACTGTGGTATA
ACCTGCCATGCTGGGATCGTTGTGT
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