CV885145

Overview
NameCV885145
Unique NameCV885145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.571e-23
Identity = 52/122 (42.62%), Postives = 82/122 (67.21%), Query Frame = 3
Query:  489 KVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            +V+A+K++D + +      +F+  V  +S   HPN+++L+G+C+E  Q LLVYE+   GSL D LH+L    KPL WN+R+KIA G AR LEYLH+  +  V+++++K +NILL  +  P+L
Sbjct:  127 QVVAIKQLDRNGVQG--IREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKL 246          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.737e-22
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DG ++AVK++ + +       +F+  +  IS LHHPN+++L G C E GQ LLVYEF +N SL   L    E    L W +R KI +G AR L YLHE   L +VH++IK+ N+LLD +LNP++
Sbjct:  645 DGTIIAVKQLSTGSKQGNR--EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKI 766          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            A F DG   AVK++       +M  +F   V  +S+  H N++ L GYC      LL+Y F +NGSL  +LH   + N  LIW+ R+KIA G AR L YLH+VC  +V+H+++KS+NILLD +    L
Sbjct:  771 ANFPDGSKAAVKRLSGDC--GQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHL 896          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21
Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD 833
            DGK +AVK     +  S +   F+  V+ +S++HH N++ L+GYC E  + +LVYE+  NGSL D LH    D KPL W +R++IA   A+ LEYLH  C+ S++H+++KS+NILLD
Sbjct:  627 DGKEVAVKITADPS--SHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHG-SSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLD 740          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21
Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLD-----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL 830
            G+  A+KK+DSS  P     +F+  VS +S+L   N++EL+GYC + G  +L YE+  NGSLHD LH        +    L W  RVKIA+G A+ LEYLHE     ++H++IKS+NILL
Sbjct:   90 GRAAAIKKLDSSKQPDR---EFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILL 206          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.275e-21
Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 3
Query:  498 AVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLD-----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL 830
            A+KK+DS+  P    ++F+  VS +S+L H N ++L+GYC +    +L YEF  NGSLHD LH        +    L W  RVKIA+G AR LEYLHE  +  ++H++IKS+N+LL
Sbjct:   99 AIKKLDSNKQPD---NEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLL 211          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.587e-21
Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 3
Query:  468 CAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLD-----EDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILL 830
            C +F  G+ +A+KK+D+S+   E   DF   +S +S+L H + +EL+GYC E    +L+Y+F   GSLHD LH        E    L WN RVKIA G A+ LE+LHE     +VH++++S+N+LL
Sbjct:   89 CGKFK-GEAVAIKKLDASS-SEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLL 212          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 7.297e-21
Identity = 50/102 (49.02%), Postives = 69/102 (67.65%), Query Frame = 3
Query:  549 FIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            F+  V  +S+  HPNI++  GYC+E G + LVY F  NGSL D LHL  +   PL W  R+ I LGTARA+++LH+  S S++H +IKS+N+LLD  L P+L
Sbjct:  256 FLTEVEQLSRFRHPNIVDFAGYCAESGLYCLVYGFLPNGSLEDQLHLQTQACSPLSWPQRLDILLGTARAIQFLHQ-DSPSLIHGDIKSSNVLLDERLMPKL 356          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20
Identity = 49/123 (39.84%), Postives = 78/123 (63.41%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            A  ADG+ +AVK+ +++ +      +F   +  +  + H NI+ L+GY +E G+ LLVYE+  +G+LHD LH       PL W+ R+KIA+ TA+ LEYLH      ++H ++KS+N+LLD+E
Sbjct:  537 AVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLH---SGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSE 656          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.773e-20
Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 3
Query:  459 CLQCAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNK-PLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            C+      DG  +AVK+   S+   +  ++F   +  +S+L+H +++ L+GYC E G+ LLVYEF  +GSLH+ LH  ++  K  L W  RV IA+  AR +EYLH      V+H++IKS+NIL+D E N ++
Sbjct:  525 CVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARV 657          
The following BLAST results are available for this feature:
BLAST of CV885145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
RLCK7_ARATH1.571e-2342.62Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1534_ARATH1.737e-2244.35Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH2.962e-2242.19Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y1677_ARATH1.470e-2145.30Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC1.470e-2145.00Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2706_ARATH3.275e-2144.83Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH5.587e-2142.06Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
IRAK1_MOUSE7.297e-2149.02Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
ACCR1_ARATH1.245e-2039.84Serine/threonine-protein kinase-like protein CCR1 ... [more]
ACR4_ARATH2.773e-2039.85Serine/threonine-protein kinase-like protein ACR4 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885145 ID=CV885145; Name=CV885145; organism=Citrus sinensis; type=EST; length=855bp
CAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAGC
TACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACTT
ATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAGA
GTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCTT
GACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTCA
CGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACAA
AGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCAT
CATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGAG
TTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAAT
CTCCAATGTGTCTCCAATGTGCACAATTTGCCGATGGAAAGGTTCTTGCA
GTGAAGAAAATAGATTCGTCTGCCCTTCCCAGTGAAATGTGTGATGATTT
TATCGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGG
AGCTAGTGGGTTATTGTTCAGAGTATGGACAGCACCTGCTAGTGTATGAG
TTCCGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTTGGATGAAGA
CAACAAGCCTTTGATATGGAACTCCCGCGTCAAGATTGCTTTGGGGACCG
CACGAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCAC
AAAAATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCA
ACTTT
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