CV885145

Overview
NameCV885145
Unique NameCV885145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.621e-20
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 3
Query:  480 ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            ADG+V+AVK++ S +       +F+  +  IS L HPN+++L G+C E  Q LL YE+ +N SL   L        P+ W +R KI  G A+ L +LHE   L  VH++IK+ NILLD +L P++
Sbjct:  701 ADGRVVAVKQLSSKSRQGNR--EFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKI 823          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.621e-20
Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 3
Query:  492 VLAVKKIDSSALP--SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            V AVK++  +A    + +   F+  V  +S+  HPNI++  GYC++ G + LVY F  NGSL D LH   +   PL W  R+ I LGTARA+++LH+  S S++H +IKS+N+LLD  L P+L
Sbjct:  235 VYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQ-DSPSLIHGDIKSSNVLLDERLTPKL 356          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.621e-20
Identity = 51/127 (40.16%), Postives = 84/127 (66.14%), Query Frame = 3
Query:  477 FADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLI-WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            F +G+ +AVK++   +   +M  +F   VS +++L H N+++L+G+C+E  + +LVYEF  N SL  F+   DED + L+ W  R +I  G AR L YLHE   L ++H+++K++NILLD E+NP++
Sbjct:  367 FPNGQEVAVKRLTKGSGQGDM--EFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFI--FDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKV 489          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.730e-20
Identity = 49/123 (39.84%), Postives = 80/123 (65.04%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G V+AVK+ +  +L  +   +F   +  +S+LHH N++ L+GYC + G+ +LVYE+  NGSL D L       +PL    R++IALG+AR + YLH      ++H++IK +NILLD+++NP++
Sbjct:  653 GLVVAVKRAEQGSLQGQK--EFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSA--RFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKV 771          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 842
            A  +DG  +AVK+ +++ +       F   +  + ++ H NI+ L+GYCSE G+ LLVYE+  +G+LHD LH    D   L W+ R+KI L  AR L+YLH      ++H+++K++NILLD E+
Sbjct:  536 AVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLH---GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEM 656          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.376e-19
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 842
            DG+ +AVK    SA  ++   +F   ++ +S + H N++ L+GYC+EY Q +LVY F  NGSL D L+      K L W +R+ IALG AR L YLH     SV+H+++KS+NILLD+ +
Sbjct:  616 DGQEVAVKV--RSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSM 733          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19
Identity = 53/135 (39.26%), Postives = 86/135 (63.70%), Query Frame = 3
Query:  471 AQFADGKVLAVKKID-SSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY--GQHLLVYEFRKNGSLHDFLH----LLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            A+  +G+ +AVKKI     L S     F   V  + ++ H ++++L+GYCS    G +LL+YE+ KNGS+ D+LH    +L++  K L W +R++IA+G A+ +EYLH  C   +VH++IKS+N+LLD+ +   L
Sbjct:  968 AELENGETVAVKKILWKDDLMSNK--SFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHL 1100          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19
Identity = 48/124 (38.71%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DG  +A+KK+   +   +   +F+  +  I ++ H N++ L+GYC    + LLVYEF K GSL D LH   +    L W++R KIA+G+AR L +LH  CS  ++H+++KS+N+LLD  L  ++
Sbjct:  904 DGSAVAIKKLIHVSGQGDR--EFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARV 1025          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 842
            DG+ +AVK   S++  ++   +F   ++ +S + H N++ L+GYC+EY Q +LVY F  NGSL D L+      K L W +R+ IALG AR L YLH     SV+H+++KS+NILLD  +
Sbjct:  617 DGQEVAVKVRSSTS--TQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSM 734          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19
Identity = 52/123 (42.28%), Postives = 77/123 (62.60%), Query Frame = 3
Query:  492 VLAVKKIDSSALP--SEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            V AVK++   A    + +   F   V  +S+  HPNI++  GYC++ G + LVY F  NGSL D LH+  +   PL W  R+ I LGTARA+++LH+  S S++H ++KS+N+LLD  L P+L
Sbjct:  235 VYAVKRLKEEADLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGSLEDRLHVQTQAWPPLSWPQRLDILLGTARAIQFLHQ-DSPSLIHGDVKSSNVLLDERLMPKL 356          
The following BLAST results are available for this feature:
BLAST of CV885145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
RKF1_ARATH3.621e-2040.80Probable LRR receptor-like serine/threonine-protei... [more]
IRAK1_HUMAN3.621e-2043.09Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
CRK40_ARATH3.621e-2040.16Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
Y5374_ARATH4.730e-2039.84Probable LRR receptor-like serine/threonine-protei... [more]
ACCR2_ARATH1.054e-1939.52Serine/threonine-protein kinase-like protein CCR2 ... [more]
NORK_PEA1.376e-1943.33Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
GSO1_ARATH2.347e-1939.26LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_ARATH2.347e-1938.71Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
NORK_MEDTR3.066e-1942.50Nodulation receptor kinase OS=Medicago truncatula ... [more]
IRAK1_BOVIN3.066e-1942.28Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885145 ID=CV885145; Name=CV885145; organism=Citrus sinensis; type=EST; length=855bp
CAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAGC
TACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACTT
ATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAGA
GTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCTT
GACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTCA
CGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACAA
AGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCAT
CATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGAG
TTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAAT
CTCCAATGTGTCTCCAATGTGCACAATTTGCCGATGGAAAGGTTCTTGCA
GTGAAGAAAATAGATTCGTCTGCCCTTCCCAGTGAAATGTGTGATGATTT
TATCGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGG
AGCTAGTGGGTTATTGTTCAGAGTATGGACAGCACCTGCTAGTGTATGAG
TTCCGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTTGGATGAAGA
CAACAAGCCTTTGATATGGAACTCCCGCGTCAAGATTGCTTTGGGGACCG
CACGAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCAC
AAAAATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCA
ACTTT
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