CV885145

Overview
NameCV885145
Unique NameCV885145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 48/128 (37.50%), Postives = 82/128 (64.06%), Query Frame = 3
Query:  474 QFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNK-PLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            + ++GK++AVK++ + +       +F+  +  IS L HPN+++L G C E  Q +LVYE+ +N  L   L   DE ++  L W++R KI LG A+ L +LHE   + +VH++IK++N+LLD +LN ++
Sbjct:  696 ELSEGKLIAVKQLSAKSRQGNR--EFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKI 821          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            A   DGK +A+KK+       E   +F   V  +S+  HPN++ L G+C      LL+Y + +NGSL  +LH  ++    L W +R++IA G A+ L YLHE C   ++H++IKS+NILLD   N  L
Sbjct:  751 ATLPDGKKVAIKKLSGDCGQIER--EFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHL 876          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 53/125 (42.40%), Postives = 83/125 (66.40%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYG-QHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            +GK +AVK++  +    +  D F   V+ ISQ+ H N+++L+G CS  G + LLVYE+  N SLHD+L  + +D +PL W  R KI LGTA  + YLHE  +L ++H++IK +NILL+++  P++
Sbjct:  344 NGKTVAVKRLFFNT--KQWVDHFFNEVNLISQVDHKNLVKLLG-CSITGPESLLVYEYIANQSLHDYL-FVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRI 464          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 3
Query:  462 LQCAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            L  ++   G V+AVKK+ +         +++  V+ + QL HPN+++LVGYC E    LLVYEF   GSL +  HL     +PL W  R+K+A+G A+ L +LH+  S  V++++ K+ANILLD E N +L
Sbjct:  107 LTASKPGSGIVVAVKKLKTEGYQGHK--EWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKS-QVIYRDFKAANILLDAEFNSKL 232          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 51/125 (40.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDD---FIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLD--EDNKPLI--WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN 836
            DG+ +A+K+ + +A   +  +    F   ++ +S+LHH +++ LVGYC E  + LLVY++ KNG+L+D LH  +  E +  LI  W  R+KIAL  AR +EYLH      ++H++IKS+NILLD+
Sbjct:  517 DGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDS 641          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 48/125 (38.40%), Postives = 77/125 (61.60%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDN-KPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DG +L +K++  S    +   +F   +  +  + + N++ L+GYC    + LL+YE+  NG L+D LH  DE++ KPL W SR+KIA+GTA+ L +LH  C+  ++H+NI S  ILL  E  P++
Sbjct:  324 DGSLLMIKRLQDSQRSEK---EFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKI 445          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 50/125 (40.00%), Postives = 76/125 (60.80%), Query Frame = 3
Query:  480 ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            ADG  +AVK++ S +       +F+  +  IS L HPN+++L G C E  + LLVYE+ +N SL   L   ++    L W++R KI +G A+ L YLHE   L +VH++IK+ N+LLD  LN ++
Sbjct:  689 ADGMTIAVKQLSSKSKQGNR--EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKI 811          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 49/119 (41.18%), Postives = 76/119 (63.87%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            DG+++AVKK  S  +  +  ++FI  V  +SQ++H NI++L+G C E    +LVYEF  NG+L + LH   ++N    WN R++IA+  A AL YLH   S  + H+++KS NI+LD +
Sbjct:  468 DGRIVAVKK--SKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEK 584          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 49/128 (38.28%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            AQ  DG V+A+KK+   +   +   +F   +  I ++ H N++ L+GYC    + LLVYE+ K GSL D LH   +    L W +R KIA+G AR L +LH  C   ++H+++KS+N+LLD  L  ++
Sbjct:  905 AQLKDGSVVAIKKLIHVSGQGDR--EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARV 1030          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.260e-19
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = -1
Query:  211 IVHIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYARELRGKSQLDSLRI 477
            IV+IGD LEIITNGTYRSIEHR VVNS +ERLS+AT ++V    EV PA SL+  +    F+R+ ++EY    ++R L GK+ LD+LRI
Sbjct:  270 IVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358          
The following BLAST results are available for this feature:
BLAST of CV885145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
Y1765_ARATH4.004e-1937.50Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH4.004e-1939.06Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK3_ARATH4.004e-1942.40Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
APK2B_ARATH4.004e-1940.46Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
ACCR3_ARATH4.004e-1940.80Putative serine/threonine-protein kinase-like prot... [more]
Y5838_ARATH5.229e-1938.40Probably inactive leucine-rich repeat receptor-lik... [more]
Y5343_ARATH5.229e-1940.00Probable LRR receptor-like serine/threonine-protei... [more]
WAKLH_ARATH5.229e-1941.18Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
BRI1_SOLPE5.229e-1938.28Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
SRG1_ARATH5.260e-1956.18Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885145 ID=CV885145; Name=CV885145; organism=Citrus sinensis; type=EST; length=855bp
CAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAGC
TACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACTT
ATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAGA
GTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCTT
GACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTCA
CGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACAA
AGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCAT
CATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGAG
TTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAAT
CTCCAATGTGTCTCCAATGTGCACAATTTGCCGATGGAAAGGTTCTTGCA
GTGAAGAAAATAGATTCGTCTGCCCTTCCCAGTGAAATGTGTGATGATTT
TATCGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGG
AGCTAGTGGGTTATTGTTCAGAGTATGGACAGCACCTGCTAGTGTATGAG
TTCCGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTTGGATGAAGA
CAACAAGCCTTTGATATGGAACTCCCGCGTCAAGATTGCTTTGGGGACCG
CACGAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCAC
AAAAATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCA
ACTTT
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