CV885145

Overview
NameCV885145
Unique NameCV885145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 49/125 (39.20%), Postives = 76/125 (60.80%), Query Frame = 3
Query:  480 ADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            ADG  +AVK++ S +       +F+  +  IS L HPN+++L G C E  + LLVYE+ +N SL   L   ++    L W++R K+ +G A+ L YLHE   L +VH++IK+ N+LLD  LN ++
Sbjct:  687 ADGMTIAVKQLSSKSKQGNR--EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKI 809          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 50/127 (39.37%), Postives = 78/127 (61.42%), Query Frame = 3
Query:  474 QFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            +  +G  +AVKK+ ++   +E   +F   V  I  + H N++ L+GYC E    +LVYE+  +G+L  +LH     +  L W +R+KI  GTA+AL YLHE     VVH++IK++NIL+D+E N +L
Sbjct:  201 KLVNGTEVAVKKLLNNLGQAEK--EFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKL 325          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            DG+++AVKK  S  +  +  ++FI  V  +SQ++H NI++L+G C E    +LVYEF  NG+L + LH   +D     W  R++IA+  A AL YLH   S  + H++IKS NI+LD +
Sbjct:  454 DGRIVAVKK--SKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEK 570          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 49/128 (38.28%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            AQ  DG V+A+KK+   +   +   +F   +  I ++ H N++ L+GYC    + LLVYE+ K GSL D LH   +    L W +R KIA+G AR L +LH  C   ++H+++KS+N+LLD  L  ++
Sbjct:  905 AQLKDGSVVAIKKLIHVSGQGDR--EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARV 1030          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 53/144 (36.81%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  426 CGMSHWL*SPMCLQCAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLL-DEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            C    WL     L   + + G V+AVK+++          +++  ++ + QL HPN+++L+GYC E  Q LLVYEF   GSL + L    ++D KPL W  R+K+AL  A+ L +LH    + V++++IK++NILLD++ N +L
Sbjct:   74 CVFRGWL-DETTLTPTKSSSGLVIAVKRLNPDGFQGHR--EWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHS-DPVKVIYRDIKASNILLDSDFNAKL 213          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 48/123 (39.02%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G V+AVK+++          +++  ++ + QL HPN+++L+GYC E    LLVYEF   GSL + L       +PL WN+RV++ALG AR L +LH      V++++ K++NILLD+  N +L
Sbjct:  100 GIVIAVKRLNQEGFQGHR--EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKL 219          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 49/125 (39.20%), Postives = 78/125 (62.40%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDED-NKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DG V+AVK+   ++   +   +F   +  +S+L+H +++ L+GYC +  + LLVYEF  +GSL+  LH  D +  K L W  RV IA+  AR +EYLH      V+H++IKS+NIL+D + N ++
Sbjct:  526 DGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARV 650          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G V+AVKK++          +++  V+ + Q  HPN+++L+GYC E    LLVYEF   GSL + L       +PL W  R+K+ALG A+ L +LH     SV++++ K++NILLD+E N +L
Sbjct:  101 GVVIAVKKLNQDGWQGHQ--EWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKL 220          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.521e-18
Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            DG ++AVKK  S AL  E  ++FI  +  +SQ++H N+++++G C E    +LVYEF  N +L D LH   ED  P+ W  R+ IA   A AL YLH   S+ + H+++KS NILLD +
Sbjct:  411 DGMIVAVKK--SKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSED-FPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEK 526          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.521e-18
Identity = 48/124 (38.71%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            +G+ +AVK++   +   ++  +F   VS +++L H N+++L+G+C+E  + +LVYEF  N SL  F+   DE    L W  R +I  G AR L YLHE   L ++H+++K++NILLD E+NP++
Sbjct:  374 NGQEVAVKRLTKGSGQGDI--EFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFI-FDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKV 494          
The following BLAST results are available for this feature:
BLAST of CV885145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
Y5344_ARATH6.830e-1939.20Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH8.920e-1939.37Probable receptor-like protein kinase At2g42960 OS... [more]
WAKLJ_ARATH8.920e-1941.18Wall-associated receptor kinase-like 10 OS=Arabido... [more]
BRI1_SOLLC8.920e-1938.28Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y3545_ARATH1.165e-1836.81Probable receptor-like protein kinase At3g55450 OS... [more]
NAK_ARATH1.165e-1839.02Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRI4_MAIZE1.165e-1839.20Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
APK1B_ARATH1.165e-1839.84Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
WAKLG_ARATH1.521e-1842.86Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
CRK39_ARATH1.521e-1838.71Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885145 ID=CV885145; Name=CV885145; organism=Citrus sinensis; type=EST; length=855bp
CAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAGC
TACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACTT
ATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAGA
GTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCTT
GACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTCA
CGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACAA
AGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCAT
CATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGAG
TTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAAT
CTCCAATGTGTCTCCAATGTGCACAATTTGCCGATGGAAAGGTTCTTGCA
GTGAAGAAAATAGATTCGTCTGCCCTTCCCAGTGAAATGTGTGATGATTT
TATCGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGG
AGCTAGTGGGTTATTGTTCAGAGTATGGACAGCACCTGCTAGTGTATGAG
TTCCGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTTGGATGAAGA
CAACAAGCCTTTGATATGGAACTCCCGCGTCAAGATTGCTTTGGGGACCG
CACGAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCAC
AAAAATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCA
ACTTT
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