CV885145

Overview
NameCV885145
Unique NameCV885145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.521e-18
Identity = 54/143 (37.76%), Postives = 82/143 (57.34%), Query Frame = 3
Query:  426 CGMSHWL*SPMCLQCAQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            C    W+     L  ++   G V+AVK++           +++  V+ + QL HPN++ LVGYC+E    LLVYEF   GSL +  HL     +PL W  R+K+A+G A+ L +LHE  S  V++++ K+ANILLD + N +L
Sbjct:   99 CVFKGWI-DQTSLTASRPGSGIVVAVKQLKPEGFQGHK--EWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKS-QVIYRDFKAANILLDADFNAKL 235          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.987e-18
Identity = 48/119 (40.34%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            DG+ +AVKK  S  +  +   +FI  V  +SQ++H ++++L+G C E    +LVYEF  NG+L   +H  + D+  +IW  R++IA+  A AL YLH   S  + H++IKS NILLD +
Sbjct:  465 DGRTVAVKK--SKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEK 581          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.389e-18
Identity = 44/124 (35.48%), Postives = 78/124 (62.90%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            +G+V+A+K+    ++      +F   +  +S++HH N+++L+G+C +  + +LVYE+  NGSL D L    ++   L W  R+KIALG+ + L YLHE+    ++H+++KS NILLD  L  ++
Sbjct:  655 NGQVIAIKRAQQGSMQGAF--EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLS--GKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKV 774          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.389e-18
Identity = 54/126 (42.86%), Postives = 80/126 (63.49%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHL-LVYEFRKNGSLHDFLHLLDEDNK-PLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            D + +AVK +  S+  ++    F   V  + ++HH N++ LVGYC E GQHL L+YE+  NG+L    HL  E+++ PL W +R++IA  TA+ LEYLH  C   ++H++IKS NILLDN    +L
Sbjct:  612 DNEQVAVKVLSESS--AQGYKQFKAEVDLLLRVHHINLVTLVGYCDE-GQHLVLIYEYMSNGNLKQ--HLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKL 732          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18
Identity = 47/119 (39.50%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            DG+ +AVKK  S  +  +   +FI  V  +SQ++H ++++L+G C E    +LVYEF  NG+L   +H  + D+  ++W  R++IA+  A AL YLH   S  + H++IKS NILLD +
Sbjct:  474 DGRTVAVKK--SKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEK 590          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.782e-18
Identity = 44/123 (35.77%), Postives = 81/123 (65.85%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G V+A+K+    +L  E   +F+  +  +S+LHH N++ L+G+C E G+ +LVYE+ +NG+L D + +  +  +PL +  R++IALG+A+ + YLH   +  + H++IK++NILLD+    ++
Sbjct:  647 GTVVAIKRAQEGSLQGEK--EFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISV--KLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKV 765          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.782e-18
Identity = 50/124 (40.32%), Postives = 75/124 (60.48%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DG  +AVK + ++   +E   +F   V  I ++ H N++ L+GYC E    +LVY+F  NG+L  ++H    D  PL W+ R+ I LG A+ L YLHE     VVH++IKS+NILLD + N ++
Sbjct:  175 DGTKVAVKNLLNNRGQAEK--EFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKV 296          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.782e-18
Identity = 50/124 (40.32%), Postives = 75/124 (60.48%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            D  ++A+KK  +    S   D FI  V  +SQ++H N+++++G C E    LLVYEF  NG+L D LH    D+  L W  R++IA+  A  L YLH   S+ ++H++IK+ANILLD  L  ++
Sbjct:  436 DNTIVAIKK--ARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSS-LTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKV 556          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.782e-18
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = 3
Query:  471 AQFADGKVLAVKKID-SSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEY--GQHLLVYEFRKNGSLHDFLHLLDEDNKPLI--WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            A+  +G+ +AVKKI     L S     F   V  +  + H ++++L+GYCS    G +LL+YE+  NGS+ D+LH  +   K  +  W +R+KIALG A+ +EYLH  C   +VH++IKS+N+LLD+ +   L
Sbjct:  965 AELKNGETIAVKKILWKDDLMSNK--SFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHL 1095          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.551e-18
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDN 836
            A   DG  +A+K++       +M  +F   V  +S+  HPN++ L+GYC+     LL+Y +  NGSL  +LH   +    L W +R++IA G A  L YLH+ C   ++H++IKS+NILL +
Sbjct:  760 ATLPDGTKVAIKRLSGDT--GQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSD 879          
The following BLAST results are available for this feature:
BLAST of CV885145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
APK2A_ARATH1.521e-1837.76Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
WAKLM_ARATH1.987e-1840.34Wall-associated receptor kinase-like 17 OS=Arabido... [more]
Y5977_ARATH3.389e-1835.48Probable leucine-rich repeat receptor-like protein... [more]
Y4245_ARATH3.389e-1842.86Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH4.427e-1839.50Wall-associated receptor kinase-like 18 OS=Arabido... [more]
Y1684_ARATH5.782e-1835.77Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH5.782e-1840.32Probable serine/threonine-protein kinase At1g01540... [more]
WAK3_ARATH5.782e-1840.32Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
GSO2_ARATH5.782e-1839.10LRR receptor-like serine/threonine-protein kinase ... [more]
PSKR1_DAUCA7.551e-1836.89Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885145 ID=CV885145; Name=CV885145; organism=Citrus sinensis; type=EST; length=855bp
CAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAGC
TACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACTT
ATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAGA
GTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCTT
GACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTCA
CGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACAA
AGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCAT
CATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGAG
TTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAAT
CTCCAATGTGTCTCCAATGTGCACAATTTGCCGATGGAAAGGTTCTTGCA
GTGAAGAAAATAGATTCGTCTGCCCTTCCCAGTGAAATGTGTGATGATTT
TATCGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGG
AGCTAGTGGGTTATTGTTCAGAGTATGGACAGCACCTGCTAGTGTATGAG
TTCCGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTTGGATGAAGA
CAACAAGCCTTTGATATGGAACTCCCGCGTCAAGATTGCTTTGGGGACCG
CACGAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCAC
AAAAATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCA
ACTTT
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