CV885145

Overview
NameCV885145
Unique NameCV885145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 48/125 (38.40%), Postives = 76/125 (60.80%), Query Frame = 3
Query:  483 DGKVLAVK-KIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DGK +AVK + D + L +   D FI  V  +SQ+ H N++   G+C E  + +LVYE+   GSL D L+        L W SR+K+A+  A+ L+YLH      ++H+++KS+NILLD ++N ++
Sbjct:  627 DGKQVAVKVRFDRTQLGA---DSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKV 748          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 842
            DG  +AVK+ +  +   +   +F   +  +S+L H +++ L+GYC E  + +LVYEF  NG   D  HL  ++  PL W  R++I +G+AR L YLH   +  ++H+++KS NILLD  L
Sbjct:  547 DGTKVAVKRGNPQS--EQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRD--HLYGKNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEAL 662          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 842
            DG  +AVK+   +    +   +F   +  +S+L H +++ L+GYC E  + +LVYE+  NG L    HL   D  PL W  R++I +G AR L YLH   S S++H+++K+ NILLD  L
Sbjct:  531 DGTKVAVKR--GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRS--HLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENL 646          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  474 QFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            + ADG ++AVK++     P      F   V  IS   H N++ L G+C    + LLVY +  NGS+   L        PL W+ R +IALG+AR L YLH+ C   ++H+++K+ANILLD E
Sbjct:  323 RLADGTLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE 443          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  474 QFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            + ADG ++AVK++     P      F   V  IS   H N++ L G+C    + LLVY +  NGS+   L        PL W +R +IALG+AR L YLH+ C   ++H+++K+ANILLD E
Sbjct:  320 RLADGTLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE 440          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 48/124 (38.71%), Postives = 81/124 (65.32%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLI-WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G+ +AVK++   +   E+  +F   V  +++L H N+++L+G+C+E  + +LVYE   N SL  F+   DED + L+ W+ R +I  G AR L YLHE   L ++H+++K++NILLD E+NP++
Sbjct:  362 GQEIAVKRLAGGSGQGEL--EFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFI--FDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKV 481          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17
Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G+ LAVKK+  S +   + +DF   V  +++  HPN++ + GY      HLLV E+  NG+L   LH  +    PL W+ R KI LGTA+ L YLH     + +H N+K  NILLD + NP++
Sbjct:  749 GRNLAVKKLVPSPILQNL-EDFDREVRILAKAKHPNLVSIKGYFWTPDLHLLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKI 870          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            D  ++A+KK       S   + FI  V  +SQ++H N+++L+G C E    LLVYEF  NG+L D LH    D+  L W  R+KIA+  A  L YLH   S+ ++H++IK+ANILLD  L  ++
Sbjct:  430 DNSIVAIKKARLG--DSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSS-LTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKV 550          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 45/125 (36.00%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLI--WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G+ +AVK++   +   +  ++FI  VS +++L H N++ L+G+C +  + +L+YEF KN SL    H + + N+ +I  W +R +I  G AR L YLHE     +VH+++K++N+LLD+ +NP++
Sbjct:  366 GEEIAVKRLSMKSGQGD--NEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLD---HYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKI 485          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.682e-17
Identity = 47/124 (37.90%), Postives = 81/124 (65.32%), Query Frame = 3
Query:  486 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLI-WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G+ +AVK++   +   E+  +F   V  +++L H N+++L+G+C+E  + +LVYEF  N SL  F+   DE+ + L+ W+ R +I  G AR L YLHE   L ++H+++K++NILLD  +NP++
Sbjct:  361 GEEIAVKRLTRGSGQGEI--EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFI--FDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKV 480          
The following BLAST results are available for this feature:
BLAST of CV885145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
Y5487_ARATH9.862e-1838.40Probable LRR receptor-like serine/threonine-protei... [more]
Y4391_ARATH9.862e-1837.50Probable receptor-like protein kinase At4g39110 OS... [more]
THE1_ARATH9.862e-1838.33Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
SERK2_ARATH9.862e-1839.34Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH9.862e-1839.34Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK36_ARATH9.862e-1838.71Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y3804_ARATH1.288e-1739.84Probably inactive leucine-rich repeat receptor-lik... [more]
WAK1_ARATH1.682e-1741.13Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
CRK41_ARATH1.682e-1736.00Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK38_ARATH1.682e-1737.90Cysteine-rich receptor-like protein kinase 38 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885145 ID=CV885145; Name=CV885145; organism=Citrus sinensis; type=EST; length=855bp
CAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAGC
TACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACTT
ATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAGA
GTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCTT
GACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTCA
CGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACAA
AGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCAT
CATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGAG
TTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAAT
CTCCAATGTGTCTCCAATGTGCACAATTTGCCGATGGAAAGGTTCTTGCA
GTGAAGAAAATAGATTCGTCTGCCCTTCCCAGTGAAATGTGTGATGATTT
TATCGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGG
AGCTAGTGGGTTATTGTTCAGAGTATGGACAGCACCTGCTAGTGTATGAG
TTCCGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTTGGATGAAGA
CAACAAGCCTTTGATATGGAACTCCCGCGTCAAGATTGCTTTGGGGACCG
CACGAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCAC
AAAAATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCA
ACTTT
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