CV885145

Overview
NameCV885145
Unique NameCV885145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLD 833
            DG+++AVK+  S A+  +  ++FI  V  ++Q++H NI++L+G C E    +LVYEF  NG L   LH  + D+  + W  R+ IA+  A AL YLH   S  + H++IK+ NILLD
Sbjct:  437 DGRIVAVKR--SKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHD-ESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLD 550          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  474 QFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            + ADG ++AVK++            F   V  IS   H N++ L G+C    + LLVY +  NGS+   L    E N  L W  R  IALG+AR L YLH+ C   ++H+++K+ANILLD E
Sbjct:  312 RLADGNLVAVKRLKEERTKGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEE 432          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 3
Query:  471 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYC--SEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            A  +  KV AVKK+  + + +      +  +  I ++ H N+++L  +    EYG  L++Y + +NGSLHD LH  +   KPL W++R  IA+GTA  L YLH  C  ++VH++IK  NILLD++L P +
Sbjct:  833 ATLSPDKVYAVKKLVFTGIKNGSVS-MVREIETIGKVRHRNLIKLEEFWLRKEYG--LILYTYMENGSLHDILHETNPP-KPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHI 958          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 3
Query:  495 LAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFL------HLLDEDNKP-LIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            +AVK++ S++   +   +F   V  +++L H N++ L+G+C E  + +LVYEF  N SL+ FL      HLLD   K  L W  R  I  G  R L YLH+   L+++H++IK++NILLD ++NP++
Sbjct:  346 VAVKRLSSNS--GQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKI 470          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.090e-16
Identity = 49/124 (39.52%), Postives = 74/124 (59.68%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DG+ +AVK +   +   +    F+  +  IS + H N+++L G C E    LLVYE+  NGSL   L    E    L W++R +I LG AR L YLHE   L +VH+++K++NILLD++L P++
Sbjct:  714 DGREVAVKLLSVGSRQGK--GQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQAL--FGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKV 833          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.090e-16
Identity = 47/135 (34.81%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  483 DGKVLAVKKID-----------SSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            DG  +AVK I+           SS+  S++  +F      +  +HH N+   VGYC +     L+YE+  NG+L D+L    E+ + L W  R+ IA+ +A+ LEYLH  C   +VH+++K+ANILL++ L  ++
Sbjct:  588 DGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLS--SENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKI 720          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.090e-16
Identity = 49/125 (39.20%), Postives = 80/125 (64.00%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDED-NKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            +GK +AVK++  +    +  ++F   V+ IS + H N+++L+G   E  + LLVYE+  N SL  FL   DE  +K L W+ R+ I LGTA  L YLH    + ++H++IK++N+LLD++LNP++
Sbjct:  336 NGKNVAVKRLVFNT--RDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFL--FDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKI 456          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.424e-16
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNE 839
            DG+ +AVKK  S  +  +  ++FI  V  +SQ++H ++++L+G C E     LVYEF  NG+L   +H  + D+    W  R++IA+  A AL YLH   S  + H++IKS NILLD +
Sbjct:  472 DGRTVAVKK--SKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHE-ESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEK 587          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.424e-16
Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  486 GKVLAVKKI-DSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDN--KPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQL 854
            G+ LAVKK+   +   +E    F   V  + ++ H NI++L+  C+      LVYEF +NGSL D LH   E     PL W +R  IA+G A+ L YLH      +VH+++KS NILLD+E+ P++
Sbjct:  708 GQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRV 833          
BLAST of CV885145 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.860e-16
Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = 3
Query:  483 DGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNEL 842
            DG  +AVK+ +  +   +   +F   +  +SQ  H +++ L+GYC E  + +LVYE+ +NG+L    HL       L W  R++I +G+AR L YLH   +  V+H+++KSANILLD  L
Sbjct:  503 DGTKVAVKRANPKS--QQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKS--HLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENL 618          
The following BLAST results are available for this feature:
BLAST of CV885145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
WAKLB_ARATH8.349e-1741.03Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
SERK4_ARATH8.349e-1739.34Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RPK1_IPONI8.349e-1738.46Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
CRK32_ARATH8.349e-1738.58Putative cysteine-rich receptor-like protein kinas... [more]
Y5614_ARATH1.090e-1639.52Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH1.090e-1634.81Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH1.090e-1639.20Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
WAKLK_ARATH1.424e-1639.50Putative wall-associated receptor kinase-like 11 O... [more]
HSL2_ARATH1.424e-1639.68LRR receptor-like serine/threonine-protein kinase ... [more]
Y5597_ARATH1.860e-1637.50Probable receptor-like protein kinase At5g59700 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885145 ID=CV885145; Name=CV885145; organism=Citrus sinensis; type=EST; length=855bp
CAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAGC
TACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACTT
ATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAGA
GTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCTT
GACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTCA
CGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACAA
AGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCAT
CATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGAG
TTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAAT
CTCCAATGTGTCTCCAATGTGCACAATTTGCCGATGGAAAGGTTCTTGCA
GTGAAGAAAATAGATTCGTCTGCCCTTCCCAGTGAAATGTGTGATGATTT
TATCGAGATGGTTTCAAACATATCCCAGCTGCATCACCCGAACATAATGG
AGCTAGTGGGTTATTGTTCAGAGTATGGACAGCACCTGCTAGTGTATGAG
TTCCGTAAAAATGGTTCACTGCACGACTTCTTGCATCTGTTGGATGAAGA
CAACAAGCCTTTGATATGGAACTCCCGCGTCAAGATTGCTTTGGGGACCG
CACGAGCACTGGAGTACCTGCATGAAGTCTGCTCACTGTCAGTTGTTCAC
AAAAATATTAAGTCGGCCAACATATTACTGGACAACGAGCTCAATCCTCA
ACTTT
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