CV885143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_CYAP7 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 7424) GN=rplO PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.783e-12 Identity = 48/105 (45.71%), Postives = 61/105 (58.10%), Query Frame = -1 Query: 342 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 656 EGGQMPLYRRIPKL+ +Y +N+ + A EV+LETL GLI + PLKILG+GEL+ L KA AF+ A+EK+EAAG + V Sbjct: 51 EGGQMPLYRRIPKLKHFP---LVNRRQYTIINVGQL--ASLDPNSEVTLETLMDAGLITTNDG----PLKILGNGELTIPLTIKAAAFTKGAQEKIEAAGGSCVV 146
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_CORK4 (50S ribosomal protein L15 OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=rplO PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.783e-12 Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = -1 Query: 345 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 656 EGGQMP++ R+PKL+G + Y VN+ D++ F G V++ L GL+ K P+K+LGDGE++ +N A FS SAK+K+EAAG ++T Sbjct: 52 EGGQMPIHMRLPKLKGFK---NPNKVTYQVVNVADLQKH-FENGGNVTIADLVSAGLVRA-----KQPVKVLGDGEITASVNITATKFSASAKQKIEAAGGSVT 146
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_SYNJA (50S ribosomal protein L15 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplO PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12 Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = -1 Query: 357 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 656 EGGQ PLYRR+PKL+ + P+Y +NL+ + A G EVSLE+L G++ + PLKILGDGE+ L +A A + SA+ K+EAAG Sbjct: 51 EGGQTPLYRRLPKLKHFP--RYVRRPQYTLINLRAL--AKLPAGSEVSLESLMDLGIVTTNDG----PLKILGDGEVGVPLTIRAAAITPSARAKVEAAG 142
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_PROMP (50S ribosomal protein L15 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplO PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQMPLYRR+PKL+ + VNL + F E + V++++L KKK L P K PLKILG+GE+ KL +A AF+ AKEK+EAAG + ++ Sbjct: 53 EGGQMPLYRRVPKLKHFE---IINQKNFSIVNLSKLSE--FKESEVVNIDSLVKKKLLFKP-----KFPLKILGNGEVKVKLKVQAHAFTKVAKEKIEAAGGSCEII 149
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_BACP2 (50S ribosomal protein L15 OS=Bacillus pumilus (strain SAFR-032) GN=rplO PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12 Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQMPL++R+PK G + Y +NL + + F EG EV+ E L + G I+ + K +KILG+G+L KKL KA FS SAKE +EAAG T V+ Sbjct: 51 EGGQMPLFQRLPK----RGFTNINRKDYAVINLDRLNS--FDEGTEVTPELLLETGAIS----KLKAGVKILGNGKLEKKLTVKANKFSASAKEAIEAAGGTAEVI 146
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_ANAVT (50S ribosomal protein L15 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplO PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ K PLK+LG+G+L LN KA AF+ A+ K+EAAG + VL Sbjct: 51 EGGQQPLYRRIPKLKGFPV---VNRKIYTTINVEKL--ADLPANTEVTLESLRASGILTAV----KGPLKVLGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_SULSY (50S ribosomal protein L15 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplO PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 357 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 656 EGGQ P RIPK G + +Y VNLK +E F E +EV+ +TLK+KGL+ ++ +KILGDG+L+KKL KA AFS SA+EK+++ G Sbjct: 52 EGGQTPFIMRIPK----RGFKNPSKIEYEIVNLKALENK-FNENEEVNPQTLKEKGLV-----KKGECVKILGDGQLTKKLTVKAHAFSASAEEKIKSVG 141
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_PROM9 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplO1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQMPLYRR+PKL+ + +NL ++ F + D V+L++L KKGLI + K PLKILG+G+++ KL +A AF+ AK+K+E AG + +L Sbjct: 53 EGGQMPLYRRVPKLKHFE---IINQKNFSIINLDKLK--DFNDNDTVNLDSLVKKGLIF----KPKFPLKILGNGKVNVKLTVQAHAFTKVAKQKIEDAGGSCELL 149
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_LACH4 (50S ribosomal protein L15 OS=Lactobacillus helveticus (strain DPC 4571) GN=rplO PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = -1 Query: 339 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 656 EGGQMPL+R +PK G + +Y VNL D+ F +G EV++ETLK+ GL+ ++ +K+LG+GEL KL K S +AK+ +EAAG T+ V+ Sbjct: 51 EGGQMPLFRTMPK----RGFKNINRKEYAIVNLDDLNK--FNDGSEVTVETLKENGLV----KKELSGVKLLGNGELKVKLTVKVNKVSAAAKKAVEAAGGTVEVI 146
BLAST of CV885143 vs. ExPASy Swiss-Prot
Match: RL15_LACBA (50S ribosomal protein L15 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rplO PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = -1 Query: 357 EGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 656 EGGQMPLYRRIPK G + ++ VNL + F +G EV+ L + G++ + K +KILG+GELSKKL KA FS SA E +EAAG Sbjct: 49 EGGQMPLYRRIPK----RGFTNINRKEFAVVNLSALNV--FDDGAEVTPAALVEAGIV----KNEKAGIKILGNGELSKKLTVKAAKFSKSAAEAIEAAG 138 The following BLAST results are available for this feature:
BLAST of CV885143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885143 ID=CV885143; Name=CV885143; organism=Citrus sinensis; type=EST; length=656bpback to top |