CV885138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS7_ORYSJ (Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica GN=OSH3 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.939e-55 Identity = 114/233 (48.93%), Postives = 154/233 (66.09%), Query Frame = -3 Query: 215 LAAARQEFESRQRSSL--NSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPE---------IDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQN---AASLYMD 871 +AAA + E+RQR++ + +DPELDQFME Y +LV+ +EEL+RP+QEA +F+R +E++LN +++GP + + G+ SS++D+ G E+ E IDPR++D+ LK HLLRKYSGY KEARQKLL WWELHY+WP PSE EK+ALAESTGL+QKQINN FINQRKRHWKP+E+M+F VM+ H Q+ AA+ Y+D Sbjct: 106 IAAAARVREARQRAAAAASRMPPAPEDPELDQFMEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSINSGPP--LTALISESKAGLDSSDDDEHEDGSGMEMMEAAEDEDLGIIDPRSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVMEAYHHQSTDAAAAFYVD 336
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 1.117e-54 Identity = 109/204 (53.43%), Postives = 133/204 (65.20%), Query Frame = -3 Query: 236 SSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPE-----IDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQN 832 +S+ +DP LDQFMEAY +MLVKY +EL++P +EAM F++R+E Q LS F+ G G + D+ N+G E + +DP+AEDRELK LLRKYSGY KEARQ+LL+WW HYKWPYPSE +K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD HP + Sbjct: 166 ASMGPTGCLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFS--------GYGETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHH 361
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: STM_BRAOL (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.613e-53 Identity = 107/202 (52.97%), Postives = 130/202 (64.36%), Query Frame = -3 Query: 242 SSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPE-----IDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHP 832 +S+ S +DP LDQFMEAY +MLVKY +EL++P +EAM F++ +E Q LS G G + ++ N+G E + +DP+AEDRELK LLRKYSGY KEARQ+LL+WW HYKWPYPSE +K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD HP Sbjct: 168 ASMGPTGSLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLS---------LSSPSSLGYGEAAIERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHP 360
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum GN=LET6 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.751e-53 Identity = 109/212 (51.42%), Postives = 134/212 (63.21%), Query Frame = -3 Query: 197 SSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAASLYMDGHYMAD 832 SS + +DP LDQFMEAY +ML KY +EL++P +EAM F+ RIE Q L+ P S + + GSS+E+ + + IDP+AEDRELK LLRKYSGY KEARQ+L++WW H KWPYPSE++K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD HP + H+ D Sbjct: 143 SSSSGGGIIGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDEEVDVNNSF-----IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLANHFPMD 349
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.583e-53 Identity = 113/199 (56.78%), Postives = 133/199 (66.83%), Query Frame = -3 Query: 215 KDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGV---GSSEEDQENSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAASLYMD 802 +DP LDQFMEAY +ML KY +EL++P++EAM F++RIE Q L+ +S+D EG GSSEED + IDP+AEDR+LK LLRKYSGY KEARQ+LL WW HYKWPYPSE++K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD HP YMD Sbjct: 181 EDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLT------ISSSDFASNEGGDRNGSSEEDVDLHN------MIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPH----YYMD 363 HSP 2 Score: 21.557 bits (44), Expect = 3.583e-53 Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = -1 Query: 880 CQKVEVPPEV 909 CQKV PPEV Sbjct: 144 CQKVGAPPEV 153
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS4_ORYSJ (Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.946e-53 Identity = 116/220 (52.73%), Postives = 136/220 (61.82%), Query Frame = -3 Query: 227 RLAAARQEFESRQRSSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETE---LPEI-DPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAAS 874 RL+A E +SR S+ DPELD+FME Y DMLV YR+ELTRPIQEA F R +E Q++ + DD EG SSE++QE GG+ LPEI P AED+ELK+HLL KYSGY ++ARQKLL+WW+LHY+WPYPSE EK ALAESTGLD KQINNWFINQRKRHWKP+ M L P AAS Sbjct: 94 RLSALAGELDSRAEDRYLQGQSS--DPELDEFMETYIDMLVSYRQELTRPIQEADQFFRNMEAQIDSFT---------LDDNGSEGGNSSEDEQEAGGGDMASAGLPEITSPCAEDKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPTPPA--MEYRSLQPAGAAS 300 HSP 2 Score: 21.557 bits (44), Expect = 7.946e-53 Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = -1 Query: 880 CQKVEVPPEV 909 CQKV PPEV Sbjct: 82 CQKVGAPPEV 91
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS8_ORYSJ (Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica GN=OSH43 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.256e-47 Identity = 112/245 (45.71%), Postives = 136/245 (55.51%), Query Frame = -3 Query: 179 AARQEFESRQRSSLNSRDSTNKDPE-LDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS--EDMQFMVMD-------------GLHPQNAASLYMDGHYMADGPYRLG 865 AA+Q E+ + DP+ LDQFM+AY ML +YREEL RPI EA +F R+ETQL+ L+ + CEG GSSEE+Q+ S D++LK+ LLRKY G KEARQKLL+WWELHYKWPYPSE EK+ LA++TGLDQKQINNWFINQRKRHWKP+ F M+ GL A LYM ++ DG YRLG Sbjct: 121 AAQQLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSLA-----------ESNCEGTGSSEEEQDPS--------------DKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTAFPTMEAAGGGFRHSGHGGGLAAAAALPLYMGRPFVVDGMYRLG 340
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNAT6_ARATH (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.556e-46 Identity = 97/183 (53.01%), Postives = 120/183 (65.57%), Query Frame = -3 Query: 254 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEID-PRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 799 DPELD+FME Y D+LVKY+ +L RP EA F+ +IE QL L G ++D GV SS D+E SGG+ E+ E R EDR+LK+ LLRK+ +EARQ LL+WW LHYKWPYP+E +K+ALA++TGLDQKQINNWFINQRKRHWKPSE+M F +MD Sbjct: 141 DPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSED----GVISS--DEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMD 317
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS1_ORYSJ (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica GN=OSH6 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 6.143e-45 Identity = 97/200 (48.50%), Postives = 124/200 (62.00%), Query Frame = -3 Query: 215 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEI----DPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL-HPQNAASLYMD 799 DPELD+FMEAY +LV+Y+EEL+RP EA F+ I+TQL+ L +G +T E VGSS+EDQ GET++ +I R D ELK LL+KYSG K+AR LL WW HY+WPYP+E +K+ LA TGLD KQINNWFINQRKRHWKPS+ M+F +M+G+ + +LY D Sbjct: 98 DPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVGSSDEDQ--CSGETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFALMEGVAGGSSGTTLYFD 295
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNAT2_ARATH (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2 PE=1 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 2.334e-44 Identity = 91/182 (50.00%), Postives = 115/182 (63.19%), Query Frame = -3 Query: 254 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 799 DPELD+FME Y D+LVKY+ +L RP EA FI +IE QL L GP +DD V S EE +E+ + + R+ DR+LK+ LLRK+ + +EARQ LL+WW +H KWPYP+E +K++LAE TGLDQKQINNWFINQRKRHWKPSE+M F +MD Sbjct: 125 DPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDG---AVSSDEELREDD--DIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMD 301 The following BLAST results are available for this feature:
BLAST of CV885138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885138 ID=CV885138; Name=CV885138; organism=Citrus sinensis; type=EST; length=909bpback to top |