CV885138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSJ (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica GN=OSH71 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.357e-42 Identity = 93/201 (46.27%), Postives = 119/201 (59.20%), Query Frame = -3 Query: 215 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEI----DPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL--HPQNAASLYMD 799 DPELD+FME Y +L +Y+EELTRP EA F+ I TQL L G +++D+ VGSSE+ E G+ + + R D ELK LL+KYSG K+AR L++WW HY+WPYP+E +KV LA TGLD KQINNWFINQRKRHWKPSEDM+F +M+G+ + +LY D Sbjct: 111 DPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEM----VGSSED--EPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVTGGSSSGTTLYFD 305
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSI (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica GN=OSH71 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 6.357e-42 Identity = 93/201 (46.27%), Postives = 119/201 (59.20%), Query Frame = -3 Query: 215 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEI----DPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL--HPQNAASLYMD 799 DPELD+FME Y +L +Y+EELTRP EA F+ I TQL L G +++D+ VGSSE+ E G+ + + R D ELK LL+KYSG K+AR L++WW HY+WPYP+E +KV LA TGLD KQINNWFINQRKRHWKPSEDM+F +M+G+ + +LY D Sbjct: 111 DPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEM----VGSSED--EPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVTGGSSSGTTLYFD 305
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS5_ORYSJ (Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica GN=Os03g0673500 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.157e-37 Identity = 92/201 (45.77%), Postives = 110/201 (54.73%), Query Frame = -3 Query: 227 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAEDREL----KNHLLRKYSGYXXXXXXXXXXXXXXXXXXK--EARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKP----SEDMQFMVMDGLHPQNAAS 799 DPELDQFME Y ML +Y +EL RPIQEA +F R IE Q++ L+ E V ED+ G LPE + E+ + HL+ KYSGY +AR KLL WW LHY+WPYPSE EK ALAESTGLD+KQ+ NWFINQRKRHWKP + D F+ M HP+ AS Sbjct: 130 DPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSLALD-------------EDVSYDYEDEVAGG----LPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKPKPAAAMDAGFLQM---HPRYGAS 310
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS9_ORYSJ (Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica GN=Os03g0772100 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 102/253 (40.32%), Postives = 131/253 (51.78%), Query Frame = -3 Query: 179 AARQEFESR----QRSSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAEDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHY-KWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS--EDMQFMVMD-------------GLHPQNAAS---LYMDG-HYMADGPYRLG 865 AA+Q+ ++ +R RD D +LDQFM A D ++ + S G +++ +S D CEG GSSEE+Q+ S E E EIDP D++LK+ LL KY G KEAR KLL+WWELHY KWPYPSE EK+ LA++TGLDQKQI+NWFINQRKRHWKP+ M F ++ GL AA+ LYM ++ DG YRLG Sbjct: 119 AAQQQLDAADGHPRRRHEPRRDDDVPDHQLDQFMHA--------------------DEVQGGAGAADPGSRGVLQL-DSIADSNCEGTGSSEEEQDTSCPEAE--EIDP--SDKQLKHQLLMKYGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVAGMTFPTVEAAGGGFRHSGHDGGLAAAAAAAALPLYMGSWPFVVDGMYRLG 346
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX4_MAIZE (Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.243e-29 Identity = 61/85 (71.76%), Postives = 65/85 (76.47%), Query Frame = -3 Query: 281 ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS 535 ELK LL+KYSGY KEARQKLL+WWELHYKWPYPSETEK+ALAE+TGLDQKQINNWFINQRKRHWKPS Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAEATGLDQKQINNWFINQRKRHWKPS 85
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX3_MAIZE (Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.618e-29 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 281 EDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS 544 +D+ELK LLRKYSG KEARQKLL+WWELHY+WPYPSE EK+ALAESTGL+QKQINNWFINQRKRHWKPS Sbjct: 1 DDKELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPS 88
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX8_MAIZE (Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.375e-28 Identity = 59/85 (69.41%), Postives = 64/85 (75.29%), Query Frame = -3 Query: 281 ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS 535 ELK+ LLRKY GY KEARQKLL+WWELHYKWPYPSETEK+ALAE+TGLD KQINNWFINQRKRHWKP+ Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKPA 85
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNX10_MAIZE (Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.423e-27 Identity = 55/86 (63.95%), Postives = 62/86 (72.09%), Query Frame = -3 Query: 287 EDRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWK 544 ED +LKN LL KYSGY ++ARQKLL+WW+LHY+WPYPSE EK ALAESTGL+ KQINNWFINQRKRHWK Sbjct: 1 EDNDLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQRKRHWK 86
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNX11_MAIZE (Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.966e-23 Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = -3 Query: 281 DRELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS 541 DRELK LL+KYSG K+AR L++WW HY+WPYP+E +KV LA +TGLD KQINNWFINQRKRHWKPS Sbjct: 2 DRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAATGLDPKQINNWFINQRKRHWKPS 88
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX5_MAIZE (Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.543e-22 Identity = 48/85 (56.47%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 281 ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS 535 ELK LL+KYSG K+AR L++WW HY+WPYP+E +KV LA TGLD KQINNWFINQRKRHWKPS Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPS 85 The following BLAST results are available for this feature:
BLAST of CV885138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885138 ID=CV885138; Name=CV885138; organism=Citrus sinensis; type=EST; length=909bpback to top |