CV885138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: HLG3_MAIZE (Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.246e-21 Identity = 49/85 (57.65%), Postives = 54/85 (63.53%), Query Frame = -3 Query: 281 ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPS 535 ELK LL+KYSG K+AR LL WW HY+WPYP+E +KV LA TGLD KQINNWFINQRKRHWKPS Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPS 85
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.419e-17 Identity = 60/206 (29.13%), Postives = 88/206 (42.72%), Query Frame = -3 Query: 290 SSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAED---------------------RELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 832 S+L + + + ELDQFM Y +L ++E+L + ++ EA+ +E L L T EG G++ D E+ ++E DP + +ELK+ L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 156 SALAAAAAGDDGRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSL----------TGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 351
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.419e-17 Identity = 59/187 (31.55%), Postives = 82/187 (43.85%), Query Frame = -3 Query: 290 ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSN-----GPVRIFNSTDDQKCEGVGSSEEDQENSGGE--TELPEIDPRAEDR--------ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 793 ELD F+ Y +L ++E+L + ++ EA+ R IE L+ L+ G + +D S + SGG T + P +R ELK L + + + L NWW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 89 ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 275
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.419e-17 Identity = 61/194 (31.44%), Postives = 84/194 (43.30%), Query Frame = -3 Query: 290 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEID------------PRAEDR--------ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 799 D ELDQFM Y +L ++E+L + ++ EA+ IE L L T EG+G++ D E+ E++ D P +R ELK+ L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 220 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL----------TGVSPGEGMGATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 403
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.419e-17 Identity = 59/187 (31.55%), Postives = 82/187 (43.85%), Query Frame = -3 Query: 290 ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSN-----GPVRIFNSTDDQKCEGVGSSEEDQENSGGE--TELPEIDPRAEDR--------ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 793 ELD F+ Y +L ++E+L + ++ EA+ R IE L+ L+ G + +D S + SGG T + P +R ELK L + + + L NWW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 92 ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 278
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17 Identity = 59/187 (31.55%), Postives = 81/187 (43.32%), Query Frame = -3 Query: 290 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSN------GPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAED-------RELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 799 D ELDQFM Y +L ++E+L + ++ EA+ IE L L+ + + DDQ +E E P I +E +ELK+ L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 225 DKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 411
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.335e-15 Identity = 57/187 (30.48%), Postives = 77/187 (41.18%), Query Frame = -3 Query: 290 ELDQFMEAYYDMLVKYREELTRPI----QEAMDFIRRIETQLNML-------SNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAEDR--------ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 793 ELD FM Y +L ++E+L + EA+ IE L L SNG + D+Q V + + S + P +R ELK+ L + + + L WW H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 176 ELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNW 362
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 1.335e-15 Identity = 58/194 (29.90%), Postives = 82/194 (42.27%), Query Frame = -3 Query: 290 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEID------------PRAEDR--------ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 799 D ELD FM Y +L ++E+L + ++ EA+ IE L T EG G++ + E+ E++ D P +R ELK+ L + Y + L +WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 184 DKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSF----------TGVSPGEGTGATMSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 367
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.743e-15 Identity = 57/197 (28.93%), Postives = 84/197 (42.64%), Query Frame = -3 Query: 290 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEID---------------PRAEDR--------ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 799 D +LDQFM Y +L ++E+L + ++ EA+ +E L L T EG G++ D ++ +++ +D P +R ELK+ L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 222 DKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSL----------TGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 408
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.743e-15 Identity = 60/201 (29.85%), Postives = 85/201 (42.29%), Query Frame = -3 Query: 290 STNKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPVRIFNSTDDQKCEGVGSS-EEDQENSGGETELP--------------EIDPRAEDR--------ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 811 S + ELD F+ Y +L +RE+L + ++ EA+ R IE L L+ + EG G++ ED++ + E P + P +R ELK L + + + L WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 109 SPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLE----------EGTGATMSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 299 The following BLAST results are available for this feature:
BLAST of CV885138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885138 ID=CV885138; Name=CV885138; organism=Citrus sinensis; type=EST; length=909bpback to top |