CV885138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.277e-15 Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = -3 Query: 290 ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSN-----GPVRIFNSTDDQKCEGVGSSEEDQENSGGETELPEIDPRAED-------RELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 793 ELD FM Y +L ++E+L + ++ EA+ +E L L+ G + +D + + + + + S G P + E ELKN L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 286
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.883e-15 Identity = 58/184 (31.52%), Postives = 82/184 (44.57%), Query Frame = -3 Query: 290 ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPVRIFNS---TDDQKCEGVGSSEEDQENSG------GETELPEIDPRAEDR---ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 793 ELD FM Y +L ++E+L + ++ EA+ +E L L+ R + +DD+ + S N G G L E + +R ELK+ L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 112 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 295
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX7_MAIZE (Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.635e-13 Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = -3 Query: 290 ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 535 ELKN L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 82
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX6_MAIZE (Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.635e-13 Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = -3 Query: 290 ELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 535 ELKN L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 82
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX1_MAIZE (Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.747e-13 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = -3 Query: 290 LLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 424 L WW+ H KWPYP+E +K L E TGL KQINNWFINQRKR+W Sbjct: 41 LKQWWQEHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 85
BLAST of CV885138 vs. ExPASy Swiss-Prot
Match: KNOX2_MAIZE (Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13 Identity = 34/83 (40.96%), Postives = 43/83 (51.81%), Query Frame = -3 Query: 290 RELKNHLLRKYSGYXXXXXXXXXXXXXXXXXXKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHW 538 +ELK+ L + Y + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 3 QELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 85 The following BLAST results are available for this feature:
BLAST of CV885138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885138 ID=CV885138; Name=CV885138; organism=Citrus sinensis; type=EST; length=909bpback to top |