CV885131

Overview
NameCV885131
Unique NameCV885131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.006e-52
Identity = 104/259 (40.15%), Postives = 165/259 (63.71%), Query Frame = 3
Query:  126 LPDFLNSVNLNYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFDTTDAVFLFGLLGILAYIYLETT-----PCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN 887
            + DF +SV L YV+LGY YL+++ + L+  P++  +   ++ ++   ++L   ++     L  L      I++ T      P  +YLVD++CY+PP   ++    F+E +R     N  S+EF+ RI++ SGLG+ET LP A+      P ++  R EA MV+F A++DL   T ++PKDI +L+VNC + + TPSLSAM+IN YKLR NI S+NL GMGCSA +I++D+A+DLL  +P S A+++STE+++  +Y GN
Sbjct:    1 MSDFSSSVKLKYVKLGYQYLINNFLTLLLIPVIATV-AIELLRMGPEEILSVLNSLHFELLHILCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKPPVTCRVPFSSFMEHSRLILKDNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMESARNEAQMVIFTAMEDLFKNTGLKPKDIDILIVNCSLFSPTPSLSAMIINKYKLRSNIKSYNLSGMGCSASLISVDVARDLLQVHPNSNAIIISTEIITPNYYKGN 258          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.347e-46
Identity = 110/266 (41.35%), Postives = 156/266 (58.65%), Query Frame = 3
Query:  138 LNSVNLNYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTFD-------TTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIE----------QARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGG 884
            + SVN   V+L Y Y+L++   L   P+   + G +  +LT +DL            T   +F F + G++ YI     P  +YLVD++CY PP  LK+S  + ++           +R     + +SL+F ++I + SGLGDETY P  +     R      REE   V+ GA+++L   TK+ P++I +LVVN  + N TPSLSAMV+N +KLR NI SFNLGGMGCSAG+IAIDLAKDLL+ +  +YALVVSTE ++   Y G
Sbjct:    1 MTSVN---VKLLYRYVLTNFFNLCLFPLTAFLAG-KASRLTINDLHNFLSYLQHNLITVTLLFAFTVFGLVLYIVTRPNP--VYLVDYSCYLPPPHLKVSVSKVMDIFYQIRKADTSSRNVACDDPSSLDFLRKIQERSGLGDETYSPEGLIHVPPRKTFAASREETEKVIIGALENLFENTKVNPREIGILVVNSSMFNPTPSLSAMVVNTFKLRSNIKSFNLGGMGCSAGVIAIDLAKDLLHVHKNTYALVVSTENITQGIYAG 260          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.526e-45
Identity = 103/253 (40.71%), Postives = 150/253 (59.29%), Query Frame = 3
Query:  162 VRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDLLPTF-----DTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQAR---ESGNFNDAS---LEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN 887
            V++ + YL++H   L   P+++ I   +  +L+  DL   +     + T     F  L + + +YL T P  +YLVDF+CY PP+ LK S +  ++  R   E+G +   S   ++F ++I++ SGLG ETY+P  +     + NL   R E   V+ GA+D+L   T I P DI +LVVN    N TPSLS++++N +KLR NI S NLGGMGCSAG+IAID AK LL  +  +YALVVSTE ++   Y GN
Sbjct:    8 VKIFFNYLMAHRFKLCFLPLMVAI-AVEASRLSTQDLQNFYLYLQNNHTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSHLKASTQRIMQHVRLVREAGAWKQESDYLMDFCEKILERSGLGQETYVPEGLQTLPLQQNLAVSRIETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYMGN 259          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.115e-43
Identity = 80/191 (41.88%), Postives = 127/191 (66.49%), Query Frame = 3
Query:  315 LLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN 887
            L+ I  Y Y  T    +YLVDF+C++P +  KIS + F   A+ +  + D +++F  RI+  SGLGD+TY PR +      P++ + R E+ +V+FGA++ L   T I P+++ + +VNC + N  PSLS+M++N YKL+ ++ ++NL GMGCSAG I++DLA +LL A P +YA++VSTE ++ + Y GN
Sbjct:   44 LISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTDETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGN 234          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.438e-43
Identity = 91/206 (44.17%), Postives = 136/206 (66.02%), Query Frame = 3
Query:  291 TDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFI---EQARESG-----NFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGG 884
            T ++ LF L+  +  +Y+ T P  +YLVDF+CY PP+ LK+S +  +    +ARE+G       +D  ++F+++I++ SGLG ETY+P  + C   +  +   R+E   V+FGA+D+L   T ++P DI +LVVN    N TPSL++M++N YKLR NI S NLGGMGCSAG+IA+D+AK LL  +  +YA+VVSTE ++   Y G
Sbjct:   46 TISLLLF-LVVFVWILYMLTRPKPVYLVDFSCYLPPSHLKVSIQTLMGHARRAREAGMCWKNKESDHLVDFQEKILERSGLGQETYIPEGLQCFPLQQGMGASRKETEEVIFGALDNLFRNTGVKPDDIGILVVNSSTFNPTPSLASMIVNKYKLRDNIKSLNLGGMGCSAGVIAVDVAKGLLQVHRNTYAIVVSTENITQNLYLG 250          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.660e-37
Identity = 73/191 (38.22%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  315 LLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN 887
            L+ I  Y Y  T    +YLVDF+C++P +  KIS + F   A+ +  + + +++F  RI+  SGLGD+TY PR +      P++ + R E+ +V+FGA++ L   T I P+++ + +VNC + N  PSLS+M++N YKL+ ++ ++NL G       I++DLA +LL A P +YA++VSTE ++ + Y GN
Sbjct:   44 LISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG-------ISVDLATNLLKANPNTYAVIVSTENMTLSMYRGN 227          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36
Identity = 80/212 (37.74%), Postives = 129/212 (60.85%), Query Frame = 3
Query:  255 LTFSDLLPTFDTTDAVF-LFGLLGILAYIYLET-TPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGG 884
            ++ S+L     +  +VF +F  L ++  IY    T   +YL+DF CYR P+  ++     IE        +  S++F+ RI++ S L ++T +PR++     + +L   + E    +F +++DLL   K+ P+ I +L+ NC + + +PSLSAMVIN + +R NI SFNL GMGC+AGI++++LA DLL A+ GS AL+VSTE ++  WY G
Sbjct:   13 MSISELTTLLSSGVSVFEIFAGLLVVHLIYQRIRTRVKVYLLDFTCYRAPDSNRVPMSTLIETIYLDDKLDQESIDFQARILERSWLSNQTSIPRSLMEIPLKKSLSSVKIETMTTIFTSVEDLLRKNKLSPRSIDILITNCSLHSPSPSLSAMVINKFHMRSNIKSFNLSGMGCAAGILSVNLANDLLQAHRGSLALIVSTEALNTHWYIG 224          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35
Identity = 75/190 (39.47%), Postives = 117/190 (61.58%), Query Frame = 3
Query:  315 LLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGG 884
            L+ +  Y + +   C IYL+DF+CY+PP+ L+     FIE    SG F+  SL+ +Q+I++ SG+ D+  +P  V       ++   REE   +LF  + DL +  +I PK I +LV NC +   +PS+++M+IN + +R +I SF+L GMGCSAGI++++L KDL+  +  S ALV+S E VS   Y G
Sbjct:   32 LIAVFGYYFFKPR-CIIYLIDFSCYQPPDFLRAPVSNFIEHLTISGVFDQESLDLQQKILERSGISDDASVPATVHEIPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIINKFGMRSDIKSFSLSGMGCSAGILSVNLVKDLMKIHGDSLALVLSMEAVSPNGYRG 220          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS12_ARATH (3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32
Identity = 77/209 (36.84%), Postives = 123/209 (58.85%), Query Frame = 3
Query:  294 DAVFLFGLLGILAYIYLETTPCW----------IYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVF-CPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN 887
            D +FLF  L +L+Y++ +    W           Y++D+ C++P ++  +S +   E    + N      +F  + I +SG+G++TY PR VF     RP+L+DG  E       +I  LL   +I PKDI +LVVN  +L++TPSL++ +INHYK+R ++  FNL GMGCSA +I++D+ K++  +Y    ALV ++E +S  WY GN
Sbjct:    2 DLLFLFFSL-LLSYLFFKI---WKLIDSKQDKDCYILDYQCHKPTDDRMVSTQFSGEIIYRNQNLGLTEYKFLLKAIVSSGIGEQTYAPRLVFEGREERPSLQDGISEMEEFYVDSIGKLLERNQISPKDIDILVVNVSMLSSTPSLASRIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSESLSPNWYSGN 206          
BLAST of CV885131 vs. ExPASy Swiss-Prot
Match: KCS3_ARATH (3-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana GN=KCS3 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31
Identity = 68/175 (38.86%), Postives = 105/175 (60.00%), Query Frame = 3
Query:  366 YLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVF-CPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN 887
            Y++D+ C++P ++  ++ +   +    + +      +F  + I +SG+G++TY PR  F     RP L+DG  E        I+ +L   KI P +I +LVVN  +LN+TPSLSA +INHYK+R +I  FNL  MGCSA +I+ID+ K++   Y    ALVV++E +S  WY GN
Sbjct:   75 YILDYQCHKPSDDRMVNTQFSGDIILRNKHLRLNEYKFLLKAIVSSGIGEQTYAPRLFFEGREQRPTLQDGLSEMEEFYIDTIEKVLKRNKISPSEIDILVVNVSMLNSTPSLSARIINHYKMREDIKVFNLTAMGCSASVISIDIVKNIFKTYKNKLALVVTSESLSPNWYSGN 249          
The following BLAST results are available for this feature:
BLAST of CV885131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS5_ARATH1.006e-5240.153-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana ... [more]
KCS18_ARATH5.347e-4641.353-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana... [more]
KCS16_ARATH4.526e-4540.713-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]
KCS13_ARATH1.115e-4341.883-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana... [more]
KCS8_ARATH9.438e-4344.173-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]
KCS14_ARATH2.660e-3738.22Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis... [more]
KCS20_ARATH2.252e-3637.74Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis... [more]
KCS7_ARATH1.459e-3539.473-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana ... [more]
KCS12_ARATH1.156e-3236.843-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana... [more]
KCS3_ARATH3.720e-3138.863-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885131 ID=CV885131; Name=CV885131; organism=Citrus sinensis; type=EST; length=889bp
TTGATAAGTAAATTTCCATGGCAAGAGAGCATAAGCTGCTTTCCCCGGAG
ATCGTGAACCGGGGTGTCGAGAACTCTGGCCCATACGCCGGTTCCTTGAG
TTTCTCCGTCAGGGTCCAGCGTCGTCTCCCGGATTTCCTTAACTCCGTCA
ACTTGAACTATGTGAGGCTTGGATATGGCTATCTTCTTAGCCATGGTGTT
TATCTCATACCTGCACCGATTCTCATCGTCATCTTCGGTGCTCAGATTGG
GAAGCTCACATTCAGTGATTTGCTTCCCACATTTGATACCACTGACGCCG
TTTTCCTGTTCGGATTACTCGGAATACTTGCATATATTTACCTCGAGACA
ACACCCTGTTGGATTTATCTAGTCGATTTTGCTTGTTATCGTCCTCCAAA
CGAGCTTAAGATTTCAAAGAAGGAATTCATAGAGCAAGCAAGAGAATCAG
GCAACTTCAATGATGCTTCCTTGGAATTCAAGCAAAGGATCATCAAGAAC
TCCGGTCTAGGAGACGAAACTTACCTGCCCAGAGCAGTTTTTTGCCCTGG
TTACAGACCAAATTTGAAAGATGGCAGAGAAGAGGCGGCGATGGTGCTTT
TTGGAGCTATTGATGACCTTCTAGCGGCCACAAAAATCCGGCCGAAGGAC
ATCAGAGTCCTGGTCGTAAACTGTGGTGTGTTAAACACAACACCCTCACT
GTCAGCGATGGTAATAAACCATTACAAACTTCGACATAATATTAATAGCT
TCAATCTTGGTGGCATGGGTTGTTCAGCTGGAATTATAGCTATTGATTTG
GCAAAAGATCTGTTGAATGCTTATCCTGGATCTTATGCATTAGTAGTTAG
CACAGAAGTTGTGAGCAATACATGGTATGGTGGCAATGA
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