CV885130

Overview
NameCV885130
Unique NameCV885130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_MYXXD (Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.071e-58
Identity = 127/217 (58.53%), Postives = 146/217 (67.28%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE-KKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            A+V VTEIDPICALQA MEG +V+T++     ADIFVT TGNK +I  DHM KMK+ AIVCNIGHFDNEI+V  LE Y   K   IKPQ D  +FP+ N  II+LA+GRL+NLGC TGHPS+VMS SF NQ IAQ+EL+    +  YE  KVYVLPKHLDEKV           LT L++EQADYI V   GPYKP  YRY
Sbjct:  266 YGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAADKADIFVTATGNKGVITHDHMAKMKDQAIVCNIGHFDNEIEVASLEKY---KWEEIKPQVDHIIFPD-NKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYSH--SANYEVGKVYVLPKHLDEKVARLQLKKLNAQLTELSQEQADYIGVKTSGPYKPDTYRY 476          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_METNO (Adenosylhomocysteinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.071e-58
Identity = 121/216 (56.02%), Postives = 147/216 (68.06%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            +GDV             RV+V+E+DPICALQA MEG +V T+ED    ADIFVT TGNKD+I +DHM+ MK+ AIVCNIGHFDNEI V GL     +K   IKPQ D   F + +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+ELW  +  GKY+++VY LPK LDEKV           LT+L  +QA YI VS +GP+KP HYRY
Sbjct:  259 FGDVGKGSAASLRNAGCRVLVSEVDPICALQAAMEGYEVTTMEDAAPRADIFVTATGNKDVITLDHMRAMKDRAIVCNIGHFDNEIQVAGLR---NLKWTNIKPQVDEIEFADGHR-IILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELWTNQ--GKYDRQVYTLPKALDEKVAALHLEKIGVKLTKLRPDQAAYIGVSENGPFKPDHYRY 468          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.071e-58
Identity = 120/216 (55.56%), Postives = 145/216 (67.13%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            +GDV             RV+V+EIDPICALQA MEG +V+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI V  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L  +QA YI V  +GP+K  HYRY
Sbjct:  262 FGDVGKGSAASLRQAGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVASLK---NLKWTNIKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELYANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRPDQAAYIGVKQEGPFKSDHYRY 473          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_SOLUE (Adenosylhomocysteinase OS=Solibacter usitatus (strain Ellin6076) GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.827e-58
Identity = 124/216 (57.41%), Postives = 144/216 (66.67%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARVIVTEIDPI ALQA MEG +V T+ED L   DI+VT TGN +II ++HM+ MK+ AIVCNIGHFDNEI +  L      KR+ IKPQ D + FP   S I +LAEGRL+NLGCATGHPSFVMS SF NQ +AQL+LWK K T  Y+  VY LPK LDE+V           LT LT  QA+Y+ V  +GPYKP HYRY
Sbjct:  264 YGDVGKGSAHSLRGMGARVIVTEIDPINALQAAMEGFEVTTIEDTLGRGDIYVTCTGNCEIITLEHMRLMKDQAIVCNIGHFDNEIQMDRLNE-SDAKRLQIKPQVDMYTFP-GGSSIFILAEGRLVNLGCATGHPSFVMSNSFANQTLAQLDLWKNKDT--YKVGVYTLPKKLDEEVARLHLEKIGVKLTTLTPAQAEYLGVPVEGPYKPDHYRY 475          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.827e-58
Identity = 124/218 (56.88%), Postives = 144/218 (66.06%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            A+V VTEIDPICALQA MEG +V+T++      DIFVT TGN  +I  DHM KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV           LT LT +QA YI VS +GPYK  HYRY
Sbjct:  261 YGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAAEHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEE---IKPQVDHVIFPD-GKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY 474          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.827e-58
Identity = 119/216 (55.09%), Postives = 146/216 (67.59%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            + V VTEIDPICALQA M+G +V  LE VL  ADI +TTTGNKDI+  +H + MK+  IV NIGHFDNEI V  L    G  ++ IKPQ D++        II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW  K+T +Y+ +VY+LPKHLDEKV           LT L ++QA+YI V+ +GPYKP +YRY
Sbjct:  227 YGDVGKGTAQSFKGAGSIVTVTEIDPICALQAAMDGFEVKQLETVLPKADIVITTTGNKDIVRPEHFEAMKDKTIVANIGHFDNEIAVSWLNEKHGDSKVEIKPQVDKYTI--NGKDIILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--KNTDEYKNEVYMLPKHLDEKVAKLHLERIGVELTELKQDQAEYIGVTVEGPYKPEYYRY 438          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.827e-58
Identity = 125/216 (57.87%), Postives = 146/216 (67.59%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            A V VTEIDPICALQA MEG +V+T+E     ADIFVT TGN  +I  DHMK M++NAIVCNIGHFD+EIDV     Y   +   IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ + +  KYE KVYVLPKHLDEKV           LT L+ EQA YI V  +GP+KP HYRY
Sbjct:  264 YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQY---QWDNIKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGN--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.387e-58
Identity = 123/216 (56.94%), Postives = 151/216 (69.91%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARV VTE DPICALQA M+G +V+ LEDV+S ADIF+TTTGNKD+I +DHM++MK+ AIV NIGHFDNEI+V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +    +Y  +VY+LPKHLDEKV           LT+L++EQA YI VS  GP+K  HYRY
Sbjct:  257 YGDVGKGSAASLSGAGARVKVTEADPICALQAAMDGYEVVLLEDVVSSADIFITTTGNKDVIRIDHMRQMKDMAIVGNIGHFDNEIEVAALR---NLKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKPD--QYSNQVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.387e-58
Identity = 123/217 (56.68%), Postives = 148/217 (68.20%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            A V +TEIDPICALQA MEG +V+T++D    ADIFVT TGN  +I  DHM KMK+ +I+CNIGHFD+EID+  ++ Y   +   IKPQ D  +FP T   IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+    GK Y+KKVYVLPK LDE V           LT LT EQA Y+++  +GPYKP  YRY
Sbjct:  269 YGDVGKGCAQSLRGLGATVWITEIDPICALQAAMEGYRVVTMDDACDKADIFVTATGNLRVITHDHMLKMKDQSIICNIGHFDSEIDIASVQKY---QWENIKPQVDHVIFP-TGRRIIVLAQGRLVNLGCATGHPSFVMSSSFTNQVLAQIELWQ---NGKDYQKKVYVLPKRLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.317e-58
Identity = 123/216 (56.94%), Postives = 149/216 (68.98%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARV VTE DPICALQA M+G +V+ LEDV+S ADIF+TTTGNKD+I +DHM+ MK+ AIV NIGHFDNEI+V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +    +Y  +VY+LPKHLDEKV           LT L++EQA YI VS  GP+K  HYRY
Sbjct:  257 YGDVGKGSAASLSGAGARVKVTEADPICALQAAMDGYEVVLLEDVVSSADIFITTTGNKDVIRIDHMRAMKDMAIVGNIGHFDNEIEVAALR---NLKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKPD--QYSNQVYILPKHLDEKVARLHLDKLGVKLTELSEEQAAYIGVSPKGPFKSDHYRY 466          
The following BLAST results are available for this feature:
BLAST of CV885130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_MYXXD1.071e-5858.53Adenosylhomocysteinase OS=Myxococcus xanthus (stra... [more]
SAHH_METNO1.071e-5856.02Adenosylhomocysteinase OS=Methylobacterium nodulan... [more]
SAHH_BRASB1.071e-5855.56Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_SOLUE1.827e-5857.41Adenosylhomocysteinase OS=Solibacter usitatus (str... [more]
SAHH_RALSO1.827e-5856.88Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_GRAFK1.827e-5855.09Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_BURXL1.827e-5857.87Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_RHILW2.387e-5856.94Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_NITEU2.387e-5856.68Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHH_RHIL35.317e-5856.94Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012G11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885130 ID=CV885130; Name=CV885130; organism=Citrus sinensis; type=EST; length=968bp
CCTTTTTTTTTATATCATTCATCAGTAAACAATAAGGATAACAAGATGCA
GCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAATCCAACAC
GGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAATCAACTGA
AACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACACACACTA
CTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGAAAACAAT
CAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCACTCTTCTT
CTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTAAGGACCA
TCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCCTGGTGAG
CTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCATCGAGGT
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACAATTGCAT
TGTTCTTCATCTTCTTCATGTGGTCAACCATGATGATGTCCTTGTTACCG
GTGGTGGTAACAAAGATGTCAGCATCGGAGAGGACATCCTCAAGGGTTAG
GACTTGAAGACCCTCCATAAGAGCCTGGAGAGCGCAAATTGGATCAATCT
CGGTAACAATTACACGAGCACCGGCTTGCTTCNAAGCAGCAGCACAACCC
TTGCCAACATCACCATAA
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