CV885130

Overview
NameCV885130
Unique NameCV885130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.174e-37
Identity = 100/244 (40.98%), Postives = 135/244 (55.33%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTL--------------EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV              V V+E+DPICA+QA M+G +V++               + +L   D+ VTTTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V ++    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V           +T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  229 YGDVGKGSSQSLRQEGMIVKVSEVDPICAMQACMDGFEVVSPFIDGVNDGTEASIDKALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKV---HRTGAGAFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKTQADYIGVTVEGPFKPHAYRY 469          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAD (Adenosylhomocysteinase OS=Acinetobacter sp. (strain ADP1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.825e-37
Identity = 98/237 (41.35%), Postives = 130/237 (54.85%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLE--------------DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPET-NSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK------STGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV              V VTE+DPICA+QA M+G +V++                D+L + D+ VTTTGN  +     +  +K  A+VCNIGHFD EID   L  Y   K + +KPQ  +    E  N  +I+L+EGRL+NLG ATGHPS VM  SF NQV+ Q+ L++EK      S    + +V VLPK LDE+V           LT+LT  QADY+ V  +GP+K   Y+Y
Sbjct:  234 YGDVGKGSAQSLRQEGMIVRVTEVDPICAMQACMDGYEVVSPYKNGVQTGKKEDINLDLLKNTDLIVTTTGNYHVCDSAMLDTLKAGAVVCNIGHFDTEIDTNYLRGY---KWVEVKPQVHQVYRSENENDYLILLSEGRLVNLGNATGHPSRVMDGSFANQVLGQIHLFQEKFADLPASEKAAQIRVEVLPKKLDEEVAAAMVLGFGGVLTQLTSVQADYLGVPVEGPFKSDAYKY 467          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAE (Adenosylhomocysteinase OS=Pseudomonas aeruginosa GN=ahcY PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.153e-36
Identity = 100/244 (40.98%), Postives = 138/244 (56.56%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLT-----LED---------VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV              V V E+DPICA+QA M+G +V++     + D         +L   D+ VTTTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T +  F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V           +T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  229 YGDVGKGSSQSLRQEGMIVKVAEVDPICAMQACMDGFEVVSPYKNGINDGTEASIDAALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGKDGFDAHNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAB (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ahcY PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.153e-36
Identity = 100/244 (40.98%), Postives = 138/244 (56.56%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLT-----LED---------VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV              V V E+DPICA+QA M+G +V++     + D         +L   D+ VTTTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T +  F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V           +T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  229 YGDVGKGSSQSLRQEGMIVKVAEVDPICAMQACMDGFEVVSPYKNGINDGTEASIDAALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGKDGFDAYNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.153e-36
Identity = 100/244 (40.98%), Postives = 138/244 (56.56%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLT-----LED---------VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV              V V E+DPICA+QA M+G +V++     + D         +L   D+ VTTTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T +  F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V           +T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  229 YGDVGKGSSQSLRQEGMIVKVAEVDPICAMQACMDGFEVVSPYKNGINDGTEASIDAALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIH---RTGKDGFDAHNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_PSEF5 (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ahcY PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.380e-36
Identity = 99/244 (40.57%), Postives = 136/244 (55.74%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTL--------------EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-------ETYPGVKRITIKPQTDRWVFPETNSG-IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV              V V+E+DPICA+QA M+G ++++               + +L   D+ VTTTGN ++   + +K +K  A+VCNIGHFDNEID   +       E  P V +I    +T    F   N   +I+LAEGRL+NLG ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V           +T+LTK+QA+YI V+ +GP+KP  YRY
Sbjct:  229 YGDVGKGSAQSLRQEGMIVKVSEVDPICAMQACMDGFELVSPFIDGINHGTEASIDKALLGKIDLIVTTTGNVNVCDANMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKI---HRTGPGDFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQAEYIGVTVEGPFKPDAYRY 469          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_HAHCH (Adenosylhomocysteinase OS=Hahella chejuensis (strain KCTC 2396) GN=ahcY PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.471e-36
Identity = 93/237 (39.24%), Postives = 132/237 (55.70%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTL--------------EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDR-WVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK----STGKYEKKVY--VLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV              V ++EIDPICA+QA M+G +V++                D+L   D+ VTTTGN ++     ++ +K+ A+VCNIGHFDNEID   +      +   +KPQ    +   + N  +++L+EGRL+NLG ATGHPS +M  SF NQV+AQ+ L++ K       +  K +Y  VLPK LDE+V           +T+LT+ QA YI V  +GPYKP  Y+Y
Sbjct:  229 YGDVGKGSAASLRQEGMIVKISEIDPICAMQACMDGYEVVSPYIDGVNTGAADGVNRDLLGHTDLLVTTTGNVNVCDKYMLQALKSGAVVCNIGHFDNEIDTRFMRD--NWEWEEVKPQVHVIYRNKDQNDHLLLLSEGRLVNLGNATGHPSRIMDGSFANQVLAQMYLFERKFADLPADEKPKNLYVRVLPKQLDEEVARYMVQGFGGVITKLTQPQAKYIGVEVEGPYKPTDYKY 463          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_SULSO (Adenosylhomocysteinase OS=Sulfolobus solfataricus GN=ahcY PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.132e-34
Identity = 83/184 (45.11%), Postives = 110/184 (59.78%), Query Frame = -2
Query:  365 RVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 916
            RVIVTE+DPI AL+A+M+G  V+ + +     DIFVT TGN   I V+HM  MK+ AI+ N GHF+ E+DV GL+    VK   I+P  D +  P     + +LA+GRL+NL  A GHPS VM  SF NQ +A   L K +  GK EKKVY +P  LD +V           +  LT+EQ +Y+
Sbjct:  231 RVIVTEVDPIRALEAVMDGFDVMPIAEASKVGDIFVTATGNTKAIRVEHMLNMKDGAILSNAGHFNVEVDVKGLKE-TAVKVRNIRPYVDEYTLP-NGKRVYLLADGRLVNLAAAEGHPSEVMDMSFANQALAVEYLVKNR--GKLEKKVYNMPMELDYEVARIKLKSMGIQIDELTEEQKEYL 410          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_GLOVI (Adenosylhomocysteinase OS=Gloeobacter violaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.458e-31
Identity = 76/189 (40.21%), Postives = 111/189 (58.73%), Query Frame = -2
Query:  347 VIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 913
            V+VTEI+P+ A++A M+GLQV+ + +     D+F+T TGNK +I  +H   MK+ AIVCN GHFD EID++ L      +R+ ++P T+ +   E    +IVL EGRL+NL  A GHP+ VM  SF NQ +A   L K +  GK    +Y +P+ LD ++           +  LT +Q  YIS   +G
Sbjct:  242 VVVTEINPVRAIEAAMDGLQVMPMAEAACLGDLFITVTGNKHVIRREHFAMMKDGAIVCNSGHFDIEIDLVALGELSSERRM-VRPFTEEYTL-EGGKSVIVLGEGRLINLAAAEGHPASVMDMSFANQALAVEYLIKNQ--GKLSPGIYNIPEELDRQIAALKLAAMGIAIDTLTPDQLHYISSWDEG 426          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_SYNY3 (Adenosylhomocysteinase OS=Synechocystis sp. (strain PCC 6803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.242e-31
Identity = 79/190 (41.58%), Postives = 112/190 (58.95%), Query Frame = -2
Query:  347 VIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL-ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 913
            VIVTEI P+ A++A M+G +V+ + +     DIF+T TGNK +I  +H   MK+ AIVCN GHFD EID+  L E    VK   ++  T++++ P   S IIV+ EGRL+NL  A GHPS VM  SF NQ +A   L K K  G+ E  ++ +P  +D+++           +  LT EQ +YI+  A G
Sbjct:  240 VIVTEISPVPAIEAAMDGFRVMPMAEAAHQGDIFITVTGNKHVIRPEHFAVMKDGAIVCNSGHFDIEIDLKSLKEQAKEVKE--VRNFTEQYILPNGKS-IIVIGEGRLVNLAAAEGHPSAVMDMSFANQALACEHLVKNK--GQLEPGMHSIPVEVDQEIARLKLQAMGIAIDSLTPEQVEYINSWASG 424          
The following BLAST results are available for this feature:
BLAST of CV885130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_PSEFS5.174e-3740.98Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_ACIAD8.825e-3741.35Adenosylhomocysteinase OS=Acinetobacter sp. (strai... [more]
SAHH_PSEAE1.153e-3640.98Adenosylhomocysteinase OS=Pseudomonas aeruginosa G... [more]
SAHH_PSEAB1.153e-3640.98Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEA81.153e-3640.98Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEF54.380e-3640.57Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_HAHCH7.471e-3639.24Adenosylhomocysteinase OS=Hahella chejuensis (stra... [more]
SAHH_SULSO9.132e-3445.11Adenosylhomocysteinase OS=Sulfolobus solfataricus ... [more]
SAHH_GLOVI1.458e-3140.21Adenosylhomocysteinase OS=Gloeobacter violaceus GN... [more]
SAHH_SYNY34.242e-3141.58Adenosylhomocysteinase OS=Synechocystis sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012G11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885130 ID=CV885130; Name=CV885130; organism=Citrus sinensis; type=EST; length=968bp
CCTTTTTTTTTATATCATTCATCAGTAAACAATAAGGATAACAAGATGCA
GCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAATCCAACAC
GGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAATCAACTGA
AACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACACACACTA
CTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGAAAACAAT
CAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCACTCTTCTT
CTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTAAGGACCA
TCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCCTGGTGAG
CTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCATCGAGGT
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACAATTGCAT
TGTTCTTCATCTTCTTCATGTGGTCAACCATGATGATGTCCTTGTTACCG
GTGGTGGTAACAAAGATGTCAGCATCGGAGAGGACATCCTCAAGGGTTAG
GACTTGAAGACCCTCCATAAGAGCCTGGAGAGCGCAAATTGGATCAATCT
CGGTAACAATTACACGAGCACCGGCTTGCTTCNAAGCAGCAGCACAACCC
TTGCCAACATCACCATAA
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