CV885130

Overview
NameCV885130
Unique NameCV885130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_PELLD (Adenosylhomocysteinase OS=Pelodictyon luteolum (strain DSM 273) GN=ahcY PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.035e-61
Identity = 124/216 (57.41%), Postives = 148/216 (68.52%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARVIVTEIDPICALQA MEG +V T++  + + +IFVTTTGNKD++ ++HMK+M + AIVCNIGHFDNEI V  L  Y G  ++ IKPQ D++ F E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPK LDE+V           LT L+KEQA+YI V   GPYKP HYRY
Sbjct:  261 YGDVGKGCAHSMRSYGARVIVTEIDPICALQAAMEGFEVTTMDKAVKEGNIFVTTTGNKDVVTLEHMKQMPDEAIVCNIGHFDNEIQVEPLNEYKGATKLNIKPQVDKYTF-EDGHCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NDYKVDVYRLPKALDEEVARLHLEQIGVKLTTLSKEQAEYIGVPVTGPYKPEHYRY 471          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.766e-61
Identity = 127/216 (58.80%), Postives = 147/216 (68.06%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARVI+TEIDPICALQA M+G QV TL++V+  ADIFVTTTGNKDIIM   M KMK+ AIV NIGHFDNEID+ GL   PG+ +  +KPQ   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQA YI V  DGPYKP HYRY
Sbjct:  257 YGDVGKGCAESLRGQGARVIITEIDPICALQAAMDGYQVATLDEVVDKADIFVTTTGNKDIIMASDMAKMKHQAIVGNIGHFDNEIDMAGLAQIPGIVKDEVKPQVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVEVDGPYKPDHYRY 469          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.766e-61
Identity = 127/216 (58.80%), Postives = 152/216 (70.37%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARV VTEIDPI ALQALM+G  V+T+E  +  ADI +T+TGNKDII +DHMK MK+ AI+ NIGHFDNEID+  LE   G  RI IKPQ D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV           LT+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  278 YGDVGKGCAESLAGQGARVQVTEIDPINALQALMDGFDVVTVEQAIGSADIVITSTGNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.766e-61
Identity = 127/216 (58.80%), Postives = 152/216 (70.37%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARV VTEIDPI ALQALM+G  V+T+E  +  ADI +T+TGNKDII +DHMK MK+ AI+ NIGHFDNEID+  LE   G  RI IKPQ D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV           LT+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  278 YGDVGKGCAESLAGQGARVQVTEIDPINALQALMDGFDVVTVEQAIGSADIVITSTGNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 5.138e-61
Identity = 123/216 (56.94%), Postives = 148/216 (68.52%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            +GDV             RV+V+E+DPICALQA MEG +V+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI + GL     +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L K+QADYI V  +GPYK  HYRY
Sbjct:  262 FGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAGLRN---LKWTNIKPQVDEIEFPDKHR-IIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 8.764e-61
Identity = 129/216 (59.72%), Postives = 151/216 (69.91%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            +GDV            A+V VTE+DPICALQA M+G +V+T+E+    ADIFVT TGN ++I  DHMK MK+ AIVCNIGHFDNEIDV  L+ Y   K   IKPQ D   FP+    I +LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   + GKYEK VYVLPKHLDEKV           LTRL++EQA YI VS DGP+KP  YRY
Sbjct:  221 FGDVGKGSAQSLRGLGAQVWVTEVDPICALQASMDGYKVVTMEEAAPVADIFVTATGNYNVITHDHMKAMKDEAIVCNIGHFDNEIDVASLKQY---KWDEIKPQVDHVEFPD-GKKITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELY--NNPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.145e-60
Identity = 126/216 (58.33%), Postives = 153/216 (70.83%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            +GDV            ARV+VTE+DPICALQA MEG +V+TLE+    ADIFVT TGN DII +DHM+ MK +AIVCNIGHFD+EI +  L     +K   IKPQ D   FP+    IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   +T KY+K VY+LPKHLDEKV           L++LT++QADYI V  +GP+KP HYRY
Sbjct:  255 FGDVGKGSAASLRNGGARVLVTEVDPICALQAAMEGYEVVTLEEAAPRADIFVTCTGNADIITLDHMRAMKQHAIVCNIGHFDSEIQINSL---ANMKWTEIKPQVDLVKFPD-GKEIIVLAKGRLVNLGCATGHPSFVMSASFTNQVLAQIELF--CNTDKYQKDVYMLPKHLDEKVAALHLPKLGVHLSKLTQKQADYIGVPVNGPFKPDHYRY 464          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.145e-60
Identity = 127/216 (58.80%), Postives = 150/216 (69.44%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            A V VTEIDPICALQA MEG +V+ +++V   ADIFVT TGN  +I  +HMKKM+NNAI+CNIGHFD+EI+V  L  Y   +   IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   +  KYEKKVYVLPKHLDEKV           LT L+ +QA YISV   GPYKP HYRY
Sbjct:  257 YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVRMDEVADQADIFVTATGNVGVITHEHMKKMRNNAIICNIGHFDSEIEVASLRQY---QWENIKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELF--ANGHKYEKKVYVLPKHLDEKVARLHLARIGARLTELSDQQAAYISVPKQGPYKPDHYRY 466          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_STRCO (Adenosylhomocysteinase OS=Streptomyces coelicolor GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.495e-60
Identity = 125/216 (57.87%), Postives = 147/216 (68.06%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            YGDV            ARVI+TEIDPICALQA M+G QV TL++V+  ADIFVTTTGNKDIIM   M KMK+ AIV NIGHFDNEID+ GL   PG+ +  +KPQ   W +P+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQADYI V  +GPYK  HYRY
Sbjct:  273 YGDVGKGCAESLRGQGARVIITEIDPICALQAAMDGFQVTTLDEVVDKADIFVTTTGNKDIIMAKDMAKMKHQAIVGNIGHFDNEIDMAGLAQTPGIVKDEVKPQVHTWTYPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDSLGVKLTTLRPEQADYIGVKVEGPYKADHYRY 485          
BLAST of CV885130 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.495e-60
Identity = 127/216 (58.80%), Postives = 149/216 (68.98%), Query Frame = -2
Query:  320 YGDVXXXXXXXXXXXXARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 967
            +GDV            A V V E+DPICALQA MEG  V+TL DV+ D DIFVT TGN  +I  D++ KMK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +  + +Y K+VYVLPKHLDE V           LT+LTK+QADYI+VS +GPYKP  YRY
Sbjct:  263 FGDVGKGSAQSLRGLGAIVKVAEVDPICALQAAMEGFSVVTLNDVVEDIDIFVTATGNYQVITNDNLIKMKDEAIVCNIGHFDNEIDVASLKDYPWE---NIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNK--SDEYSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472          
The following BLAST results are available for this feature:
BLAST of CV885130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_PELLD1.035e-6157.41Adenosylhomocysteinase OS=Pelodictyon luteolum (st... [more]
SAHH_STRAZ1.766e-6158.80Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_MYCSS1.766e-6158.80Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK1.766e-6158.80Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_BRAJA5.138e-6156.94Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_HALHL8.764e-6159.72Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_ZYMMO1.145e-6058.33Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]
SAHH_CHRVO1.145e-6058.80Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_STRCO1.495e-6057.87Adenosylhomocysteinase OS=Streptomyces coelicolor ... [more]
SAHH_PROMP1.495e-6058.80Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012G11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885130 ID=CV885130; Name=CV885130; organism=Citrus sinensis; type=EST; length=968bp
CCTTTTTTTTTATATCATTCATCAGTAAACAATAAGGATAACAAGATGCA
GCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAATCCAACAC
GGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAATCAACTGA
AACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACACACACTA
CTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGAAAACAAT
CAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCACTCTTCTT
CTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTAAGGACCA
TCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCCTGGTGAG
CTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCATCGAGGT
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACAATTGCAT
TGTTCTTCATCTTCTTCATGTGGTCAACCATGATGATGTCCTTGTTACCG
GTGGTGGTAACAAAGATGTCAGCATCGGAGAGGACATCCTCAAGGGTTAG
GACTTGAAGACCCTCCATAAGAGCCTGGAGAGCGCAAATTGGATCAATCT
CGGTAACAATTACACGAGCACCGGCTTGCTTCNAAGCAGCAGCACAACCC
TTGCCAACATCACCATAA
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