CV885128
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV1_HUMAN (ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.315e-11 Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ DEL + G VE A++I DK G S + FV T +DA I LNG + + IKV+ A S+ V +Y+ L +T+T + ++ FS G++++++VL T S G F+ F Sbjct: 24 VNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVS--------------YARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRF 154
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.717e-11 Identity = 50/177 (28.25%), Postives = 89/177 (50.28%), Query Frame = -3 Query: 320 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYK-----VYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFXXXXXXXXXXXSLNNSLLEGQRIRV 835 VY+ N+ +DN + +I + G V + D+ G+SR F FV + E A ++++N EI G+++ V +K ++D L + +S ++ K ++V NL ++ SE L++ F G + SA+V+ V KS GFGFV F +N +++G+ + V Sbjct: 241 VYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQ-EGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLD-ELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVM-VDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYV 414
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.717e-11 Identity = 52/177 (29.38%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 311 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKV--NITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFXXXXXXXXXXXSLNNSLLEGQRIRVNKA 835 V+I N+ IDN L G + +V D++ G S+ + FV +T E AN I+ +NG + +++ V +I++K S + +NF + VY+ N+ + VT E +K F + G++ SA + R KS GFGFV F +N+ ++GQ++ V +A Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ----SKFEEMKANFTN----VYIKNIDQEVTDEEFRKMFEKFGEITSATLSR-DQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRA 308
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.717e-11 Identity = 54/177 (30.51%), Postives = 81/177 (45.76%), Query Frame = -3 Query: 311 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKV--NITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFXXXXXXXXXXXSLNNSLLEGQRIRVNKA 835 ++I N+ IDN L + G V +V D+ G SR F FV K DA IE +NG + G E+ V ++ +K + S L+ +NF + +YV N+ T E ++ FS+ G+++SA L K GFGFV F LN + Q + V +A Sbjct: 140 IFIKNLHPAIDNKALHETFSTFGEVLSCKVALDE-NGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRI----SKLEEAKANFTN----IYVKNIDVETTDEEFEQLFSQYGEIVSA-ALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRA 306
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.717e-11 Identity = 52/177 (29.38%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 311 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKV--NITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFXXXXXXXXXXXSLNNSLLEGQRIRVNKA 835 V+I N+ IDN L G + +V D++ G S+ + FV +T E AN I+ +NG + +++ V +I++K S + +NF + VY+ N+ + VT E +K F + G++ SA + R KS GFGFV F +N+ ++GQ++ V +A Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ----SKFEEMKANFTN----VYIKNIDQEVTDEEFRKMFEKFGEITSATLSR-DQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRA 308
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.717e-11 Identity = 40/145 (27.59%), Postives = 73/145 (50.34%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ DE + G +E +++ DK TG+S + FV DA+ I LNG ++ + IKV+ S D+N +YV L KT++ + +++ FS+ G+++++++L T S G GF+ F Sbjct: 43 VNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARP-------SSASIRDAN-------LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRF 173
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.242e-11 Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = -3 Query: 320 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVD-SPYK---VYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFXXXXXXXXXXXSLNNSLLEGQRIRV 835 +Y+ NI ++L K+ +GA+ + D G+S+ F FV + E A +E+LN EI G++I V +K +++ Q E++ S Y+ +++ NL T+ SE L++ F G + SA+V+ V T KS GFGFV F +N + G+ + V Sbjct: 235 IYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDA-EGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVM-VDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYV 408 HSP 2 Score: 68.1662 bits (165), Expect = 8.520e-11 Identity = 55/176 (31.25%), Postives = 81/176 (46.02%), Query Frame = -3 Query: 311 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDL-SLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFXXXXXXXXXXXSLNNSLLEGQRIRVNKA 835 ++I N+ IDN L G + +V D G+S+ F FV +T E A A IE +NG + RE+ V K + + D S + +NF + +YV N+ + E LKK F+ G + S L KS GFGFV + LN+ + GQ+I V +A Sbjct: 142 IFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDM-GQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVG---KHISKKDRESKFEEIKANFTN----IYVKNIDLEYSEEDLKKLFTPYGAITSI-YLEKDAEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRA 308
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.242e-11 Identity = 42/145 (28.97%), Postives = 73/145 (50.34%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ +EL + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ S D+N +YV L KT+T + L++ FS+ G+++++++L T S G GF+ F Sbjct: 71 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP-------SSASIRDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 201
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.928e-11 Identity = 42/145 (28.97%), Postives = 73/145 (50.34%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ +EL + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ S D+N +YV L KT+T + L++ FS+ G+++++++L T S G GF+ F Sbjct: 43 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP-------SSASIRDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRF 173
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.928e-11 Identity = 42/145 (28.97%), Postives = 73/145 (50.34%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ +EL + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ S D+N +YV L KT+T + L++ FS+ G+++++++L T S G GF+ F Sbjct: 43 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP-------SSASIRDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRF 173 The following BLAST results are available for this feature:
BLAST of CV885128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885128 ID=CV885128; Name=CV885128; organism=Citrus sinensis; type=EST; length=984bpback to top |