CV885128
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: PABP5_MACMU (Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.524e-11 Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = -3 Query: 395 VYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSP----YKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 835 V++ NI +ID+++L ++ E+G E +VI D +G+S+ F FV +T E A + L+G I G+ + V +K + ++ + E + +Y+ NL +T+ E LK+ FS G + AKV+ G K GFG V F Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGK--GFGVVCF 348
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV4_RAT (ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.524e-11 Identity = 41/145 (28.28%), Postives = 72/145 (49.66%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ +E + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ S D+N +YV L KT+T + L++ FS+ G+++++++L T S G GF+ F Sbjct: 43 VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP-------SSASIRDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 173
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.524e-11 Identity = 41/145 (28.28%), Postives = 72/145 (49.66%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ +E + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ S D+N +YV L KT+T + L++ FS+ G+++++++L T S G GF+ F Sbjct: 55 VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP-------SSASIRDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 185
BLAST of CV885128 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.524e-11 Identity = 41/145 (28.28%), Postives = 72/145 (49.66%), Query Frame = -3 Query: 395 IGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAEDSNFVDSPYKVYVGNLAKTVTSEMLKKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTF 829 + +P+N+ +E + G +E +++ DK TG+S + FV +DA I LNG + + IKV+ S D+N +YV L KT+T + L++ FS+ G+++++++L T S G GF+ F Sbjct: 50 VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP-------SSASIRDAN-------LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRF 180 The following BLAST results are available for this feature:
BLAST of CV885128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885128 ID=CV885128; Name=CV885128; organism=Citrus sinensis; type=EST; length=984bpback to top |