CV885112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.633e-11 Identity = 46/179 (25.70%), Postives = 80/179 (44.69%), Query Frame = 2 Query: 224 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 760 + VLVY ISG H NPAVT + L + Y+++Q +G+ ++ G + +G+ L + +I + Y +F + + R + LA L +G V + + V+G +NP RSLG A++Y+ + WI+ V P +GA A+ + + Sbjct: 95 VMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYS---CYRGLWIYIVSPIVGAVSGAWVYNMV 268
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: PDUF_SALTY (Propanediol diffusion facilitator OS=Salmonella typhimurium GN=pduF PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.491e-11 Identity = 64/212 (30.19%), Postives = 89/212 (41.98%), Query Frame = 2 Query: 224 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGAN---------ELADGYSTGTGLG--------AEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQW---------------IFWVGPFIGA-AIAAFYHQFI 760 I + VY TAGISGGH+NPAVT L+L + + Y++AQ GA G L S +T + + +LA +ST E++ T +L+ + + TD LAPL IG V ++ +T +TG +NPAR G + W W + V P IGA A AA Y FI Sbjct: 50 ISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKG---PLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLF-----TWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFI 253
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.491e-11 Identity = 61/229 (26.64%), Postives = 95/229 (41.48%), Query Frame = 2 Query: 59 SFYRAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXXXXXXXXMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAA 742 S YR + AEF+ TL+ ++ T I +TD + +++ T ISG H+NPAVT + +Y+ AQ + ++ +KA + GG G S L E I +F L++ V + ATD + V LA + +G V + L T +NP R+LG A+ N +A W++ P +GA I A Sbjct: 77 SLYRKLGAEFVGTLILIFAGTATAI-VNQKTDGAETLIGCAASAGLA--------VMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAV---FEPTMSGGVTVPTVGLSQAFAL--EFIISFNLMFVVTAVATDTRA------VGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRA---IWVYLTAPILGALIGA 282
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.865e-11 Identity = 46/192 (23.96%), Postives = 78/192 (40.62%), Query Frame = 2 Query: 221 MIFVLVYCTAGISGGHINPAV-----TFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASK 781 ++F + G NP GL R SL + AQ GA+ G + Y GG + D + TG AE++ TFV+ V + P++ + + + L + TG +NPA + G A + N+ W+ +++W+ PF+GA +AA+ + + A K Sbjct: 57 LLFAFNLLCDALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISELMPEQYKHMLGGPSLKVDLH---TGAAAELVLTFVITLAVLWII-----VKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVFPPPAPK 240
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: GLPF_ECOLI (Glycerol uptake facilitator protein OS=Escherichia coli (strain K12) GN=glpF PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.660e-11 Identity = 55/212 (25.94%), Postives = 93/212 (43.87%), Query Frame = 2 Query: 224 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKA--------FQKSYYTRYGGGAN-ELADGYST--------GTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQW---------------IFWVGPFIGAAIAAFYHQFIL 763 + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV F+++++ G + +LA +ST E++ T +L+ + + TD LAPL IG + ++ + +TG +NPAR G V AW W + GP +GA + AF ++ ++ Sbjct: 52 VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLI 255
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: GLPF_ECOL6 (Glycerol uptake facilitator protein OS=Escherichia coli O6 GN=glpF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.660e-11 Identity = 55/212 (25.94%), Postives = 93/212 (43.87%), Query Frame = 2 Query: 224 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKA--------FQKSYYTRYGGGAN-ELADGYST--------GTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQW---------------IFWVGPFIGAAIAAFYHQFIL 763 + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV F+++++ G + +LA +ST E++ T +L+ + + TD LAPL IG + ++ + +TG +NPAR G V AW W + GP +GA + AF ++ ++ Sbjct: 52 VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLI 255
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: GLPF_ECO57 (Glycerol uptake facilitator protein OS=Escherichia coli O157:H7 GN=glpF PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.660e-11 Identity = 55/212 (25.94%), Postives = 93/212 (43.87%), Query Frame = 2 Query: 224 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKA--------FQKSYYTRYGGGAN-ELADGYST--------GTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQW---------------IFWVGPFIGAAIAAFYHQFIL 763 + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV F+++++ G + +LA +ST E++ T +L+ + + TD LAPL IG + ++ + +TG +NPAR G V AW W + GP +GA + AF ++ ++ Sbjct: 52 VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLI 255
BLAST of CV885112 vs. ExPASy Swiss-Prot
Match: AQP_NOSCE (Aquaporin OS=Nosema ceranae (strain BRL01) GN=AQP PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.660e-11 Identity = 60/248 (24.19%), Postives = 94/248 (37.90%), Query Frame = 2 Query: 68 RAIIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXXXXXXXXMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG-AICGCGLVKAFQKSYYTRYG-GGANELADGYSTGTGLGAEIIGTFVLVYTVFSA-----TDPKRNARDSHVP---------VLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 763 ++ I EF A+ +F + ++IG +QT + ++Y I+ H NPA+TF R++ + ++ Q G I G V Y + +AD S G G E T +LVY F+ T PK D P + APL IGF + L I+ +G NP L ++ WD W++ +G F G + +F+L Sbjct: 10 QSYIGEFFASFIFGFAVYTSIIG-SAQTGQSAGPIIVALTIALSGV--------AIIYSFCDITVAHFNPAITFSAMCFRRLPFFGGIFIIIFQVAGFIIAGLASVAVLPGKYKNKLEIARPKRVADNVSRGRIFGTEFFLTAILVYVAFAVGVNPYTPPKDEHGDQLDPDEGLTEGRKITAPLAIGFTLGFCALLGIASSGGAFNPGIVLSPMILTG---TWDFWWVYLLGQFSGGLLGGGLQRFLL 245 The following BLAST results are available for this feature:
BLAST of CV885112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885112 ID=CV885112; Name=CV885112; organism=Citrus sinensis; type=EST; length=915bpback to top |