CV885079

Overview
NameCV885079
Unique NameCV885079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN1_PERAE (Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.476e-36
Identity = 74/149 (49.66%), Postives = 105/149 (70.47%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAH-PKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y++AL+ ++ FF+ Q+SGKL  N +++WRGDS L DG    +DL  G YDAGD++KFG PMAFT T+L+W I+E+G  M   +Q++ A+ +L+W TDYL+ A     N L VQVG P+ DH+CWERPE M   R + +V+T  PG++VA
Sbjct:   30 YSDALEKSILFFEGQRSGKLPTNQRLTWRGDSGLSDGSSYHVDLVGGYYDAGDNLKFGLPMAFTTTMLAWGIIEFGCLMP--EQVENARAALRWSTDYLLKASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVSTQNPGSDVA 176          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 71/148 (47.97%), Postives = 106/148 (71.62%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y +AL  ++ FF+ Q+SGKL  + ++SWRGDS L DG  + +DL  G YDAGD+MKFGFP+AF+ T+L+W+++E+G  M    +LQ A+D+++W +DYL+ A    + + VQVG+ ++DH CWERPE M   R + +V+ S PGT+VA
Sbjct:   36 YRDALTKSILFFEGQRSGKLPPSQRVSWRGDSGLSDGSSIKVDLVGGYYDAGDNMKFGFPLAFSMTMLAWSVVEFGGLMK--GELQHARDAVRWGSDYLLKATAHPDTVYVQVGDANRDHACWERPEDMDTPRTVYKVDPSTPGTDVA 181          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN16_ARATH (Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43860 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 66/148 (44.59%), Postives = 103/148 (69.59%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y +AL  ++ F + Q+SGKL  NN++ WRGDSAL DG+ + +DL+ G YDAGD++K+G PMAFT T L+W+ + Y  ++    +L+ A+ +++W TDY +    ++N L VQVG+P+ DH+CW RPE+M   R + +++   PGTE+A
Sbjct:   35 YKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLVNVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRWGTDYFLKCASRKNRLYVQVGDPNADHQCWARPENMKTPRTVLEISDKVPGTEIA 182          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN20_ARATH (Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.321e-35
Identity = 69/149 (46.31%), Postives = 102/149 (68.46%), Query Frame = 1
Query:  268 KYAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            +Y +AL  ++ FF+ Q+SGKL  N ++ WR DSAL DG    ++L  G YDAGD++KF +PM+FT T+LSWA +EY +++  V+QL   + ++KW TD+++ AH   N+L  QVG+ + DH CWERPE M   R L  +++S PG+E A
Sbjct:   23 EYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGSLANVNLIGGYYDAGDNVKFVWPMSFTTTLLSWAAIEYQNEISSVNQLGYLRSTIKWGTDFILRAHTSPNMLYTQVGDGNSDHSCWERPEDMDTSRTLYSISSSSPGSEAA 171          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.321e-35
Identity = 69/148 (46.62%), Postives = 104/148 (70.27%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y +AL  ++ FF+ Q+SGKL  N +++WR +S L DG  + +DL  G YDAGD+MKFGFPMAFT T+LSW+++E+G  M    +L  A+D+++W TD+L+ A    + + VQVG+P+ DH CWERPE M   R + +V+ + PG+++A
Sbjct:   44 YKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGGLMK--SELPNAKDAIRWATDFLLKATSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVDKNNPGSDIA 189          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUNA_BACPU (Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35
Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y E L+ +M F++ Q+SG+L  +N+++WRGDS LKDG+D+G DLT G YDAGDH+KFG PMA++A VL+W + EY +  +  + L    D +KW TDY + AH   N    QVG+ + DH  W   E M   RP  +++   PGTEVA
Sbjct:   49 YVEVLQKSMLFYEAQRSGRLPESNRLNWRGDSGLKDGKDVGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDEILDQIKWATDYFLKAHTGPNEFWAQVGDGNADHAWWGPAEVMPMNRPAFKIDEHCPGTEVA 196          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35
Identity = 68/148 (45.95%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y +AL  A+ FF+ Q+SG+L  N + +WRGDSAL DGR+  ++LT G YDAGD++KFG+PMAFT T+L W+ +EYG  +    +L   + +++W  D+L+ AH     L  QVG+ + DH+CWERPE M   R L ++    PG+E A
Sbjct:   41 YGDALAKAILFFEGQRSGRLPANQRATWRGDSALTDGREENVNLTGGYYDAGDNVKFGYPMAFTVTLLGWSAVEYGAAVAAAGELGNLRAAIRWGADFLLRAHASPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITADSPGSEAA 188          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN18_ARATH (Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09740 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 68/148 (45.95%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y +AL  ++ FF+ Q+SGKL  N ++ WR DS L DG    ++L  G YDAGD++KF +PM+FT T+LSWA LEY +++  V+QL   + ++KW T++++ AH   N+L  QVG+ + DH CWERPE M   R L  +++S PG+E A
Sbjct:   24 YGDALNKSILFFEGQRSGKLPTNQRVKWRADSGLSDGASANVNLIGGYYDAGDNVKFVWPMSFTTTLLSWAALEYQNEITFVNQLGYLRSTIKWGTNFILRAHTSTNMLYTQVGDGNSDHSCWERPEDMDTPRTLYSISSSSPGSEAA 171          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSJ (Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YA A    + FF+ Q+SGKL +++ + WRGDSAL DG   G+DL  G YD+GDH+KFG PMA+  T+LSW ++E+  +M   ++L    D+++W T+Y + AH + N L VQVG+ D DH CWER E M+  R   +++ + PG+EVA
Sbjct:   39 YAGAFDKCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQGVDLVGGYYDSGDHVKFGLPMAYAVTMLSWGVVEFEKEMVDGNKLHRVLDAIRWGTNYFVKAHTQHNALWVQVGDGDSDHLCWERAEDMSTPRTAFKIDINNPGSEVA 186          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSI (Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YA A    + FF+ Q+SGKL +++ + WRGDSAL DG   G+DL  G YD+GDH+KFG PMA+  T+LSW ++E+  +M   ++L    D+++W T+Y + AH + N L VQVG+ D DH CWER E M+  R   +++ + PG+EVA
Sbjct:   39 YAGAFDKCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQGVDLVGGYYDSGDHVKFGLPMAYAVTMLSWGVVEFEKEMVDGNKLHRVLDAIRWGTNYFVKAHTQHNALWVQVGDGDSDHLCWERAEDMSTPRTAFKIDINNPGSEVA 186          
The following BLAST results are available for this feature:
BLAST of CV885079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN1_PERAE3.476e-3649.66Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 S... [more]
GUN3_ORYSJ7.744e-3647.97Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]
GUN16_ARATH1.011e-3544.59Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43... [more]
GUN20_ARATH1.321e-3546.31Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23... [more]
GUN1_ARATH1.321e-3546.62Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUNA_BACPU2.943e-3546.62Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 S... [more]
GUN20_ORYSJ3.843e-3545.95Endoglucanase 20 OS=Oryza sativa subsp. japonica G... [more]
GUN18_ARATH5.019e-3545.95Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09... [more]
GUN13_ORYSJ5.019e-3545.95Endoglucanase 13 OS=Oryza sativa subsp. japonica G... [more]
GUN13_ORYSI5.019e-3545.95Endoglucanase 13 OS=Oryza sativa subsp. indica GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012E03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885079 ID=CV885079; Name=CV885079; organism=Citrus sinensis; type=EST; length=713bp
CGTTTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCAC
CCAATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATT
GTGTTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTC
TTGGTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTAT
TAAAAAGAAAACAAGTCACTCTGATAAACCGGCTCCGGTTCCCGGTCCCC
CCGGCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAG
TTCTTCGACGTACAAAAATCGGGAAAGTTAGTGAATAATAAGATATCATG
GAGAGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCA
CAAAAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATG
GCTTTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCA
GATGGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGA
TCACTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTT
CAGGTGGGCAATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAG
CATGACTGAAGAGAGACCACTCACTCAGGTCAACACATCCTTTCCTGGAA
CAGAGGTTGCAGC
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