CV885079

Overview
NameCV885079
Unique NameCV885079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN21_ORYSJ (Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y +AL   + +F+ Q+SG L  N ++ WRG S L DG   G+DL  G YDAGD++KFG PMAFT T+LSWA  E+ D++    + +   +++KW TDYL+ AH   + L  +VG+ D DH CW+RPE MT  R   +V+   PG++VA
Sbjct:   37 YKKALHSGLLYFEAQRSGHLPYNQRVRWRGHSGLADGLQQGVDLVGGYYDAGDNVKFGLPMAFTMTMLSWAAAEFWDEIAAAGERRHVLEAIKWGTDYLVKAHTAADELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDNPGSDVA 184          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN11_ORYSJ (Endoglucanase 11 OS=Oryza sativa subsp. japonica GN=GLU4 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.466e-34
Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YA+AL  ++ FF  Q+SG+L  ++ + WR +S L DG    +DLT G YD GD++KFGFPMAFT T+LSW ++EYG +M     L+ A+D+++W  DYL+ +A     VL V VG+PD DH+CWERPE M   R +  V+ S PG++VA
Sbjct:   42 YADALAKSILFFQGQRSGRLPPDQAVKWRSNSGLSDGSAANVDLTGGYYDGGDNVKFGFPMAFTTTMLSWGVVEYGGRMR-GRVLRDARDAVRWAADYLLRAATATPGVLYVGVGDPDADHRCWERPEDMDTPRAVYSVSASSPGSDVA 189          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.236e-33
Identity = 68/148 (45.95%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y +AL  ++ FF+ Q+SG+L  + ++ WR DS L DG    +DLT G YDAGD++KFGFPMAFTAT++SW ++++G         + A+ +++W TDYL+ A  K N + VQVG+  +DH CWERPE M   R + +V+ S PG++VA
Sbjct:   37 YGDALHKSILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFG--PHKEEARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVA 182          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN22_ORYSJ (Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.615e-33
Identity = 64/148 (43.24%), Postives = 96/148 (64.86%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y EAL+ ++ +F+ Q+SG+L  + +++WRG S L DG   G+DL  G YDAGDH+KFG PMAFT T+LSW  +++   +    + + A +++KW TDY + AH    V   +VG+ D DH CW+RPE MT  R   +V+   PG+++A
Sbjct:   56 YREALEKSLLYFEAQRSGRLPYSQRVTWRGHSGLTDGLQQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIDFAADIAAAGEWRHALEAIKWGTDYFVKAHTHPFVYWAEVGDGDTDHYCWQRPEDMTTSRQAYRVDRDNPGSDLA 203          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN3_ARATH (Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.109e-33
Identity = 73/149 (48.99%), Postives = 100/149 (67.11%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLIS-AHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y EAL  ++ FF  Q+SG+L +++ +SWR  S L DG    +DLT G YDAGD++KF FPMAFT T+LSW+ LEYG +M    +LQ ++ +++W TDYL+  A      L V VG+P+ DHKCWERPE M   R +  V+ S PG++VA
Sbjct:   25 YREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMG--PELQNSRVAIRWATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSDVA 171          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUNF_CLOTH (Endoglucanase F OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celF PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 72/147 (48.98%), Postives = 91/147 (61.90%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNNKIS-WRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEV 708
            Y EAL+ A+ F++ Q+SGKL  NK + WRGDSAL DG D GLDLT G YDAGDH+KF  PMA+  T+L+W++ E  D      QL    D++KW TDY I  HP  NV   QVG+   DH  W   E M   RP  +V+ + PG+ V
Sbjct:   32 YGEALQKAIMFYEFQRSGKLPENKRNNWRGDSALNDGADNGLDLTGGWYDAGDHVKFNLPMAYAVTMLAWSVYESRDAYVQSGQLPYILDNIKWATDYFIKCHPSPNVYYYQVGDGALDHSWWGPAEVMQMPRPSFKVDLTNPGSTV 178          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.597e-33
Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDV--------------VDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YA+AL  A+ FF+ Q+SGKL    +++WR DS L DG   G+DL  G YDAGD++KFG PMAFT T+LSW+++E+GD M                V QL  A+ +++W  DYL+ +A    + L VQV +P +DH+CWERPE M   R + +V    PG++VA
Sbjct:   25 YADALDKAILFFEAQRSGKLPPGQRVAWRADSGLSDGSADGVDLAGGYYDAGDNVKFGLPMAFTVTMLSWSVIEFGDMMPARRSSFLGGIFGGGGVAQLDNARAAVRWGADYLLKAATATPDTLYVQVADPYQDHRCWERPEDMDTPRSVYKVTPQSPGSDVA 187          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN14_ORYSJ (Endoglucanase 14 OS=Oryza sativa subsp. japonica GN=Os05g0129200 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.136e-33
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVN-NKISWRGDSALKDGRD--------------------------MGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKE---NVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y  AL +++ +F+ Q+SG+L    ++ WR DSAL DG D                          M +DLT G YD+GD++KFGFPMAFT   LSW+++EYGD++D   +L  A D+++W  DYL  AH        L VQVG+ D DH CW+RPE+M   R    VN S PG+++A
Sbjct:   25 YRAALAMSLLYFEGQRSGRLPPAQRVQWRADSALADGADHRVPDLASPPSSNVSVCARTDAMQCDMQVDLTGGYYDSGDNVKFGFPMAFTVAALSWSVVEYGDRLDAAGELGHALDAVRWGADYLTRAHASAGGGEALYVQVGDGDSDHSCWQRPENMDTPRTAYMVNASSPGSDIA 201          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUNI_CLOTH (Endoglucanase 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=celI PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNN--KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEV 708
            Y EAL+ A+ F++ Q+SGKL  +  +++WRGDS L DG+D G+DLT G YDAGDH+KF  PM+++A +L WA+ EY D      Q     +++KW  DY I  HP+++V   QVG+   DH  W   E M  ERP  +V+ S PG+ V
Sbjct:   78 YGEALQKAIFFYECQRSGKLDPSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTV 225          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN9_ARATH (Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 73/149 (48.99%), Postives = 96/149 (64.43%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLIS-AHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y EAL  ++ FF  Q+SG L   + ISWR  S L DG    +DLT G YDAGD++KF  PMAFT T+LSW+ LEYG +M    +L+ A+ +++W TDYL+  A      L V VG+P+ DHKCWERPE M   R +  V+ S PG++VA
Sbjct:   25 YKEALSKSLLFFQGQRSGPLPRGQQISWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNLPMAFTTTMLSWSALEYGKRMG--PELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSASNPGSDVA 171          
The following BLAST results are available for this feature:
BLAST of CV885079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN21_ORYSJ7.248e-3445.27Endoglucanase 21 OS=Oryza sativa subsp. japonica G... [more]
GUN11_ORYSJ9.466e-3448.32Endoglucanase 11 OS=Oryza sativa subsp. japonica G... [more]
GUN6_ORYSJ1.236e-3345.95Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]
GUN22_ORYSJ1.615e-3343.24Endoglucanase 22 OS=Oryza sativa subsp. japonica G... [more]
GUN3_ARATH2.109e-3348.99Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE... [more]
GUNF_CLOTH2.754e-3348.98Endoglucanase F OS=Clostridium thermocellum (strai... [more]
GUN4_ORYSJ3.597e-3344.79Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN14_ORYSJ6.136e-3341.24Endoglucanase 14 OS=Oryza sativa subsp. japonica G... [more]
GUNI_CLOTH1.785e-3245.27Endoglucanase 1 OS=Clostridium thermocellum (strai... [more]
GUN9_ARATH2.332e-3248.99Endoglucanase 9 OS=Arabidopsis thaliana GN=CEL3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012E03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885079 ID=CV885079; Name=CV885079; organism=Citrus sinensis; type=EST; length=713bp
CGTTTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCAC
CCAATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATT
GTGTTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTC
TTGGTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTAT
TAAAAAGAAAACAAGTCACTCTGATAAACCGGCTCCGGTTCCCGGTCCCC
CCGGCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAG
TTCTTCGACGTACAAAAATCGGGAAAGTTAGTGAATAATAAGATATCATG
GAGAGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCA
CAAAAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATG
GCTTTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCA
GATGGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGA
TCACTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTT
CAGGTGGGCAATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAG
CATGACTGAAGAGAGACCACTCACTCAGGTCAACACATCCTTTCCTGGAA
CAGAGGTTGCAGC
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