CV885079

Overview
NameCV885079
Unique NameCV885079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN19_ORYSJ (Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YA+AL  ++ FF+ Q+SGKL   N++ WR DS L DG    +DL  G YDAGD++KFG PMAF+ T+L+W++L++G  M    +L  A+ +++W  DYL+ +A      L VQV +P++DH+CWERPE M   R + +V    PG++VA
Sbjct:   55 YADALAKSIIFFEGQRSGKLPPGNRMPWRADSGLTDGAQYNVDLVGGYYDAGDNVKFGLPMAFSTTMLAWSVLDFGKFMGA--ELPNARAAVRWGADYLLKAATATPGALYVQVADPNQDHRCWERPEDMDTPRSVYRVTADKPGSDVA 201          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUNG_CLOCE (Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.500e-31
Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEV 708
            Y EAL+ ++ F++ Q+SG L  + + +WR DS +KDG D+G+DLT G YDAGDH+KF  PM++T+ +L+W++ E  D  D   Q +   D +KW  DY I  +P   V   QVG+  KDH  W   E M  ERP  +V+ S PG+ V
Sbjct:   41 YGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAV 187          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN24_ARATH (Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.722e-30
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y++AL  ++ FF+ Q+SG L N+ +++WR +S L DG    +DLT G YDAGD++KF FPMAFT T+L+W+++E+G+ M    +L+ +  +L+W ++YL+ S     N + VQVG+P  DH CWERPE M   R    VN   P +EVA
Sbjct:   30 YSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNIDLTGGYYDAGDNVKFNFPMAFTTTMLAWSVIEFGEFMP-SSELRNSLVALRWSSNYLLKSVSQLPNRIFVQVGDPIADHNCWERPEDMDTPRTAYAVNAPNPASEVA 177          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN22_ARATH (Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38990 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27
Identity = 61/149 (40.94%), Postives = 96/149 (64.43%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y++AL  ++ FF+ Q+SG L    +++WR +SAL DG+++ +DL  G YDAGD++KF FPMAFT T+L+W+ +++G  M   D L+    +L+W ++YL+ +     N + VQVG P  DH+CWERPE M   R    +    P +++A
Sbjct:   24 YSDALTKSILFFEGQRSGYLPREQRMTWRHNSALNDGKNLNVDLVGGYYDAGDNIKFHFPMAFTTTMLAWSAIDFGSYMSPAD-LRDNLVALRWGSNYLLKTVSQLPNRIFVQVGEPTPDHQCWERPEDMDTPRTAYALEAPKPASDLA 171          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN23_ARATH (Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39000 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27
Identity = 61/149 (40.94%), Postives = 96/149 (64.43%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y++AL+ ++ FF+ Q+SG+L    +++WR +SAL DG+++  DL  G YDAGD++KF FPMAFTAT+L+W+ +++G  M   D  +    ++KW TDYL+ +     N + V VG    DH CWERPE M   R    ++  +P +++A
Sbjct:   26 YSDALRKSILFFEGQRSGRLPKQQRMAWRRNSALNDGKNLKTDLVGGYYDAGDNVKFHFPMAFTATMLAWSSVDFGRYMSQHD-FRHNLVAVKWATDYLLKTVSQLPNRIFVHVGEVQPDHDCWERPEDMDTPRTAFALDAPYPASDLA 173          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVN-NKISWRGDSALKDGR-DMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVG-------NPDKDHKCWERPESMTEERP-LTQVNTSFPGTEVA 711
            Y  AL  A+QFFD QKSGKL   NK+SWRGDS  KDG  D+   L  G YD G ++KF FPMAF+ T+LSW+++EY  +   +D+    +D LKW TDYL+    ++  + + +  QVG       +PD D  CW++PE M+ +RP L+  + +  G EV+
Sbjct:  117 YTLALHKALQFFDAQKSGKLPKKNKVSWRGDSGTKDGLPDVVGGLVGGYYDGGSNVKFHFPMAFSMTMLSWSLIEYSHKYKAIDEYDHMRDVLKWGTDYLLLTFNNSATRLDHIYTQVGGGLRDSESPD-DIYCWQKPEDMSYDRPVLSSTSAADLGAEVS 276          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN25_ARATH (Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26
Identity = 64/155 (41.29%), Postives = 91/155 (58.71%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGR----DMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVGNPD--------KDHKCWERPESMTEERPLTQVN 684
            Y  AL  A++FF+ QKSGKL  +N +SWRG+S L+DG+        DL  G YDAGD +KF FPMA+  T+LSW+++EY  + +   +L   ++ +KW TDY +    S     + L+ QVG+ +         DH CW RPE M  +RP+T  N
Sbjct:  109 YTIALHKALKFFNAQKSGKLPKHNNVSWRGNSGLQDGKGETGSFYKDLVGGYYDAGDAIKFNFPMAYAMTMLSWSVIEYSAKYEAAGELTHVKELIKWGTDYFLKTFNSTADSIDDLVSQVGSGNTDDGNTDPNDHYCWMRPEDMDYKRPVTTCN 263          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN6_DICDI (Endoglucanase OS=Dictyostelium discoideum GN=celA PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26
Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDG-----RDMGLD--LTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y   L+ A+ F+ + ++G+L +N I WRG+SAL D      +D   D  L+ G +DAGD +KFG PMA++ T+L W+ +EY   +          D++K+ TD+LI+AH  +N    QVG+ + DH  W  PE MT  RP   + T  PGTE+A
Sbjct:   27 YCSLLENALMFYKMNRAGRLPDNDIPWRGNSALNDASPNSAKDANGDGNLSGGYFDAGDGVKFGLPMAYSMTMLGWSFIEYESNIAQCGLTSLYLDTIKYGTDWLIAAHTADNEFAGQVGDGNVDHSWWGPPEDMTMARPTYMLTTEAPGTEIA 180          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN9_ORYSJ (Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24
Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRD---MGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVGN--------PDKDHKCWERPESMTEERPLTQ 678
            +  AL+ A+ FF+ QKSGKL  NN + WRG+S +KDG     +G  L  G YDAGD +KF FP AF+ T+LSW+++EY  + + V +L   +D++KW  DY +    S     + +++QVG+           DH CW RPE +   RP+ +
Sbjct:  112 FTVALRKALMFFNAQKSGKLPKNNNVHWRGNSCMKDGLSDPAVGRSLVGGYYDAGDAVKFNFPAAFSMTLLSWSVIEYSAKYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVE 263          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN12_ORYSJ (Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24
Identity = 61/149 (40.94%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  268 KYAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGL---DLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQV----------GNPDKDHKCWERPESMTEERPL 672
            +Y +AL  A+ FF+ QKSG+L  NN I WRG+S L DG D+      L  G YDAGD++KF FP+AF+ T+LSW+++EY  +   V +    ++ +KW TDYL+         I +V          G    DH CW RPE M   RP+
Sbjct:  110 QYTDALHKALLFFNAQKSGRLPKNNGIKWRGNSGLSDGSDLTDVKGGLVGGYYDAGDNIKFHFPLAFSMTMLSWSVIEYSAKYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQVGIAKINGTQPDDHYCWNRPEDMAYPRPV 258          
The following BLAST results are available for this feature:
BLAST of CV885079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN19_ORYSJ3.367e-3144.97Endoglucanase 19 OS=Oryza sativa subsp. japonica G... [more]
GUNG_CLOCE7.500e-3143.54Endoglucanase G OS=Clostridium cellulolyticum (str... [more]
GUN24_ARATH3.722e-3044.97Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN22_ARATH1.729e-2740.94Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38... [more]
GUN23_ARATH2.258e-2740.94Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN7_ARATH6.571e-2743.48Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUN25_ARATH5.562e-2641.29Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE... [more]
GUN6_DICDI7.265e-2639.61Endoglucanase OS=Dictyostelium discoideum GN=celA ... [more]
GUN9_ORYSJ1.049e-2439.47Endoglucanase 9 OS=Oryza sativa subsp. japonica GN... [more]
GUN12_ORYSJ1.370e-2440.94Endoglucanase 12 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012E03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885079 ID=CV885079; Name=CV885079; organism=Citrus sinensis; type=EST; length=713bp
CGTTTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCAC
CCAATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATT
GTGTTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTC
TTGGTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTAT
TAAAAAGAAAACAAGTCACTCTGATAAACCGGCTCCGGTTCCCGGTCCCC
CCGGCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAG
TTCTTCGACGTACAAAAATCGGGAAAGTTAGTGAATAATAAGATATCATG
GAGAGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCA
CAAAAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATG
GCTTTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCA
GATGGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGA
TCACTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTT
CAGGTGGGCAATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAG
CATGACTGAAGAGAGACCACTCACTCAGGTCAACACATCCTTTCCTGGAA
CAGAGGTTGCAGC
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